Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491886

Identifier: 116491886

GI number: 116491886

Start: 73099

End: 73947

Strand: Direct

Name: 116491886

Synonym: PEPE_0068

Alternate gene names: NA

Gene position: 73099-73947 (Clockwise)

Preceding gene: 116491885

Following gene: 116491887

Centisome position: 3.99

GC content: 35.45

Gene sequence:

>849_bases
ATGAACTATGAGTTGGTGAGTGTTTTAAGAGTTGAGACAGATAATTGGAAGCAGCAAAAGCAGCGGGCAATCAATAATAA
TAGTAAAGTAATCACGCTTCTTCCCGATCCTTTCTTTACACGTTATAAAAAGGAAGAATATGAAAACATGATGAATATTG
TCGATTACGTGACTAAGCGAACATACGATGAAAAAAATTCCTTATTTTTCGACAAAGTACCGATGATAGATGGCGCAGAA
ATTTTCATGAATGCGGATGGAATCATTTCAATCATCAAAAATGGAGTTAGGATTGGGGAGATGCGAACATTTCCGCAAAG
TCGACGTTTGGTTCAAGATGTGACGTACTTTAACGATGATGGAACCAAAGACATGGTTGAAGAATATACGTTTGACGGCT
CGATTTTTAGTAATATCTACTATTATGAAGATCGCGTTCAAGAAATTGATTTCACTAATAATGATGGCCAAGTTTGTTTG
CGGTTCTACTTCTACGAAGGAGAAATGAATTTAATTACGGTGGTTGACCCAACAACCAATGCGGTCTTGGAATCTTACGA
TAACATGATTCAATTTCAAAAAGCACAACTCCAAAAAATTGTGGGCCCTGAAGATCAAATTAATATTTCATATTTAGGGA
TGGAATTAGATGTCTTAGAAAAGACTAAATCTAAGAACACTCTATATTTAGAAGAATCAGCTTTTGATGGTAGCACGGTT
AAAGGAAACCTGAAATTAATCATGGATGACCAGATCCAATATGTTCAACAAGCTGTAGTTAAACATGAAGATTACGATCA
GATGGTAGATCAAGGGTTGAATGTTTCAAAAGTACGATATGTAGATTGA

Upstream 100 bases:

>100_bases
CTAATGAATACCGATATCGCCACGATGGAAGACGCTATTCTTCAATCCGTAGACAAGTTTCGGGATAGCGTAATTGCCGA
TAAATGGAGGAAATTGATTG

Downstream 100 bases:

>100_bases
GATAAATTGAAGGCCAAATCATCATGATTTGGCTTTTTTACTAGAATATTGGGGAGGAACGATTATTGCAGGTTGAAAAG
AACGTCGTTATCAGTGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKRTYDEKNSLFFDKVPMIDGAE
IFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDDGTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCL
RFYFYEGEMNLITVVDPTTNAVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV
KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD

Sequences:

>Translated_282_residues
MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKRTYDEKNSLFFDKVPMIDGAE
IFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDDGTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCL
RFYFYEGEMNLITVVDPTTNAVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV
KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD
>Mature_282_residues
MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKRTYDEKNSLFFDKVPMIDGAE
IFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDDGTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCL
RFYFYEGEMNLITVVDPTTNAVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV
KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33026; Mature: 33026

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKR
CCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TYDEKNSLFFDKVPMIDGAEIFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDD
CCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCC
GTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCLRFYFYEGEMNLITVVDPTTN
CCHHHHHHHCCCCHHHHHEEEECCHHHCCCEECCCCCEEEEEEEEECCEEEEEEECCCHH
AVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEE
KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD
ECCEEEEECHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKR
CCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TYDEKNSLFFDKVPMIDGAEIFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDD
CCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCC
GTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCLRFYFYEGEMNLITVVDPTTN
CCHHHHHHHCCCCHHHHHEEEECCHHHCCCEECCCCCEEEEEEEEECCEEEEEEECCCHH
AVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEE
KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD
ECCEEEEECHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA