| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491886
Identifier: 116491886
GI number: 116491886
Start: 73099
End: 73947
Strand: Direct
Name: 116491886
Synonym: PEPE_0068
Alternate gene names: NA
Gene position: 73099-73947 (Clockwise)
Preceding gene: 116491885
Following gene: 116491887
Centisome position: 3.99
GC content: 35.45
Gene sequence:
>849_bases ATGAACTATGAGTTGGTGAGTGTTTTAAGAGTTGAGACAGATAATTGGAAGCAGCAAAAGCAGCGGGCAATCAATAATAA TAGTAAAGTAATCACGCTTCTTCCCGATCCTTTCTTTACACGTTATAAAAAGGAAGAATATGAAAACATGATGAATATTG TCGATTACGTGACTAAGCGAACATACGATGAAAAAAATTCCTTATTTTTCGACAAAGTACCGATGATAGATGGCGCAGAA ATTTTCATGAATGCGGATGGAATCATTTCAATCATCAAAAATGGAGTTAGGATTGGGGAGATGCGAACATTTCCGCAAAG TCGACGTTTGGTTCAAGATGTGACGTACTTTAACGATGATGGAACCAAAGACATGGTTGAAGAATATACGTTTGACGGCT CGATTTTTAGTAATATCTACTATTATGAAGATCGCGTTCAAGAAATTGATTTCACTAATAATGATGGCCAAGTTTGTTTG CGGTTCTACTTCTACGAAGGAGAAATGAATTTAATTACGGTGGTTGACCCAACAACCAATGCGGTCTTGGAATCTTACGA TAACATGATTCAATTTCAAAAAGCACAACTCCAAAAAATTGTGGGCCCTGAAGATCAAATTAATATTTCATATTTAGGGA TGGAATTAGATGTCTTAGAAAAGACTAAATCTAAGAACACTCTATATTTAGAAGAATCAGCTTTTGATGGTAGCACGGTT AAAGGAAACCTGAAATTAATCATGGATGACCAGATCCAATATGTTCAACAAGCTGTAGTTAAACATGAAGATTACGATCA GATGGTAGATCAAGGGTTGAATGTTTCAAAAGTACGATATGTAGATTGA
Upstream 100 bases:
>100_bases CTAATGAATACCGATATCGCCACGATGGAAGACGCTATTCTTCAATCCGTAGACAAGTTTCGGGATAGCGTAATTGCCGA TAAATGGAGGAAATTGATTG
Downstream 100 bases:
>100_bases GATAAATTGAAGGCCAAATCATCATGATTTGGCTTTTTTACTAGAATATTGGGGAGGAACGATTATTGCAGGTTGAAAAG AACGTCGTTATCAGTGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKRTYDEKNSLFFDKVPMIDGAE IFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDDGTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCL RFYFYEGEMNLITVVDPTTNAVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD
Sequences:
>Translated_282_residues MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKRTYDEKNSLFFDKVPMIDGAE IFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDDGTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCL RFYFYEGEMNLITVVDPTTNAVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD >Mature_282_residues MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKRTYDEKNSLFFDKVPMIDGAE IFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDDGTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCL RFYFYEGEMNLITVVDPTTNAVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33026; Mature: 33026
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKR CCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH TYDEKNSLFFDKVPMIDGAEIFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDD CCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCC GTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCLRFYFYEGEMNLITVVDPTTN CCHHHHHHHCCCCHHHHHEEEECCHHHCCCEECCCCCEEEEEEEEECCEEEEEEECCCHH AVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEE KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD ECCEEEEECHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECC >Mature Secondary Structure MNYELVSVLRVETDNWKQQKQRAINNNSKVITLLPDPFFTRYKKEEYENMMNIVDYVTKR CCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH TYDEKNSLFFDKVPMIDGAEIFMNADGIISIIKNGVRIGEMRTFPQSRRLVQDVTYFNDD CCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCC GTKDMVEEYTFDGSIFSNIYYYEDRVQEIDFTNNDGQVCLRFYFYEGEMNLITVVDPTTN CCHHHHHHHCCCCHHHHHEEEECCHHHCCCEECCCCCEEEEEEEEECCEEEEEEECCCHH AVLESYDNMIQFQKAQLQKIVGPEDQINISYLGMELDVLEKTKSKNTLYLEESAFDGSTV HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEE KGNLKLIMDDQIQYVQQAVVKHEDYDQMVDQGLNVSKVRYVD ECCEEEEECHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA