Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491887

Identifier: 116491887

GI number: 116491887

Start: 74013

End: 74744

Strand: Direct

Name: 116491887

Synonym: PEPE_0069

Alternate gene names: NA

Gene position: 74013-74744 (Clockwise)

Preceding gene: 116491886

Following gene: 116491888

Centisome position: 4.04

GC content: 37.16

Gene sequence:

>732_bases
TTGCAGGTTGAAAAGAACGTCGTTATCAGTGAATTTATCGTAAATATGGAAGATGTGTTATACCATCGAGATAATACCGA
TGTAAATATTGCCGAAAAGGTAGCAGAACAAACCGCCTCTTTAGCTCATTATGGAGTTGCGCACTATGTCCTGACCAACG
CCACTAATCAGCAAGACAGTGATAATTTACATATCGTACAGACTGATTTGTTCGAACATTATCCTAAATTAACTTTGTAT
TTTTATCGAATTTTGATGGCTTTTGATTTTTTGCAGGCTCATCCAGAAATTGAGAAAGCTGCTTTGACGGATGCTGGAGA
CGTAAAGATGTTGAACTATCCGTTTGATGCGGTAGAAGATGGCATCTTGTACATGGGAGACGAAACGATTTTTATTTACG
ATACCAGTATTTTGATTGGCTATGACGGTCCCCAATTTATCAAAGATTTTATTTGGGAAAATGGTCATTTACCAATTTTG
AACCTAGGTATAATGGTAGGAACGCGGGAGACACTAATCGAGTATCTAGGAATTATGGTCAAACTCATTACGGAAGCAGA
ATTAAGTTTAGCCCAAGGAAATGACGAAGCCTTTTTAGGAACGTATAAAATGGCTATTTCAAATTACGTAGCTTATTACT
ATTTTAAAGACCGGTTAGTGCATGGAAATCAAGTATCTACCATTTTTCATGGAGAACAAATGGTCAGCGGAGCCTGGTTT
AAACATAAATAG

Upstream 100 bases:

>100_bases
GGTTGAATGTTTCAAAAGTACGATATGTAGATTGAGATAAATTGAAGGCCAAATCATCATGATTTGGCTTTTTTACTAGA
ATATTGGGGAGGAACGATTA

Downstream 100 bases:

>100_bases
GAGATATTAAAGTTGGATAAAACAAAATTAAAAGCACTAATTTGTAATAAAATCTGGATTTATCAATTTTTGTCAGACCA
GAATAATACCGTCCTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQVEKNVVISEFIVNMEDVLYHRDNTDVNIAEKVAEQTASLAHYGVAHYVLTNATNQQDSDNLHIVQTDLFEHYPKLTLY
FYRILMAFDFLQAHPEIEKAALTDAGDVKMLNYPFDAVEDGILYMGDETIFIYDTSILIGYDGPQFIKDFIWENGHLPIL
NLGIMVGTRETLIEYLGIMVKLITEAELSLAQGNDEAFLGTYKMAISNYVAYYYFKDRLVHGNQVSTIFHGEQMVSGAWF
KHK

Sequences:

>Translated_243_residues
MQVEKNVVISEFIVNMEDVLYHRDNTDVNIAEKVAEQTASLAHYGVAHYVLTNATNQQDSDNLHIVQTDLFEHYPKLTLY
FYRILMAFDFLQAHPEIEKAALTDAGDVKMLNYPFDAVEDGILYMGDETIFIYDTSILIGYDGPQFIKDFIWENGHLPIL
NLGIMVGTRETLIEYLGIMVKLITEAELSLAQGNDEAFLGTYKMAISNYVAYYYFKDRLVHGNQVSTIFHGEQMVSGAWF
KHK
>Mature_243_residues
MQVEKNVVISEFIVNMEDVLYHRDNTDVNIAEKVAEQTASLAHYGVAHYVLTNATNQQDSDNLHIVQTDLFEHYPKLTLY
FYRILMAFDFLQAHPEIEKAALTDAGDVKMLNYPFDAVEDGILYMGDETIFIYDTSILIGYDGPQFIKDFIWENGHLPIL
NLGIMVGTRETLIEYLGIMVKLITEAELSLAQGNDEAFLGTYKMAISNYVAYYYFKDRLVHGNQVSTIFHGEQMVSGAWF
KHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27801; Mature: 27801

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVEKNVVISEFIVNMEDVLYHRDNTDVNIAEKVAEQTASLAHYGVAHYVLTNATNQQDS
CCCCHHHHHHHHHHCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
DNLHIVQTDLFEHYPKLTLYFYRILMAFDFLQAHPEIEKAALTDAGDVKMLNYPFDAVED
CCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCHHHHCC
GILYMGDETIFIYDTSILIGYDGPQFIKDFIWENGHLPILNLGIMVGTRETLIEYLGIMV
CEEEECCCEEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHH
KLITEAELSLAQGNDEAFLGTYKMAISNYVAYYYFKDRLVHGNQVSTIFHGEQMVSGAWF
HHHHHHHHHHCCCCCCEEHHHHHHHHHHHHEEEEEECEEECCCEEEEEEECHHHHCCCCC
KHK
CCC
>Mature Secondary Structure
MQVEKNVVISEFIVNMEDVLYHRDNTDVNIAEKVAEQTASLAHYGVAHYVLTNATNQQDS
CCCCHHHHHHHHHHCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
DNLHIVQTDLFEHYPKLTLYFYRILMAFDFLQAHPEIEKAALTDAGDVKMLNYPFDAVED
CCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCHHHHCC
GILYMGDETIFIYDTSILIGYDGPQFIKDFIWENGHLPILNLGIMVGTRETLIEYLGIMV
CEEEECCCEEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHH
KLITEAELSLAQGNDEAFLGTYKMAISNYVAYYYFKDRLVHGNQVSTIFHGEQMVSGAWF
HHHHHHHHHHCCCCCCEEHHHHHHHHHHHHEEEEEECEEECCCEEEEEEECHHHHCCCCC
KHK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA