Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491884

Identifier: 116491884

GI number: 116491884

Start: 70815

End: 71633

Strand: Direct

Name: 116491884

Synonym: PEPE_0066

Alternate gene names: NA

Gene position: 70815-71633 (Clockwise)

Preceding gene: 116491883

Following gene: 116491885

Centisome position: 3.86

GC content: 35.9

Gene sequence:

>819_bases
ATGAATAGTTCTTATGTTGTAATGTGGCCCATGGCGACCAATGGAACCTACAATTACGGTTCTACAATTAGTTATGAAAA
AGGTTTAGTTAATTTTAGTAATAGTCAAATGAGCCCAGGTGAAGCAATTTCAAGTTGGAAATCAAAGCAAGACTTCGATT
CCAATAATGCTCAATTTAACCAATTACCTTTGCTAAAGGAAGGTGAACAATATCATATTGTGGTTAATGCAGAAGTAATT
CCTAGTAACTCAGTCCAGGTTCAAATCAATTTTTTGGACACGTTGGGGGAAACTATTGATGGTATCACCACCCTAAGTTT
GGATGATTATTTTGAAGTCCCCTTGGGAACCCAAGCTTATGATTTAAACTTAATTAACTTAAATAATCAAGGCCTAACGT
TTAAAAATATCGTCATTACTCCACGAGATACCAAATTTGAAATTGAAACTTTTAGTAGTGGTACTTTTCGAATGGTTAGT
ATCTGGGATAAGGAAGAAGATTTCTTCGAGGAAGTGCCGGTTTACATTCGAAATCGAACTCTGAATATGGGATCGTACAT
TGGTCAAAATCAAGCGTTAAGACTGTACATCGAATTTGATAGTAGGAGTCTTTTAACGGAAACAGAGCTTCAAAGTGAAC
TCCAGCTAGCCATTCATGATTTAAAAGATATGGTTGAGGGACGTAATTTAGCTTTCGATGCTTTTGCTCCTGACCCAGTA
AGTCTGGCAAAAAATGATGAAAAAGTAATGTTAGTGGAGAAAACTGCAAGTATCGAGTTAGCAAAAATCTTGCATTATTA
TCGAGGGCAATCTTTCTAA

Upstream 100 bases:

>100_bases
GATGATACTAACGGGATTGTTGAGTGGTTCTTAATGCAGATTCGAAATATTTTAACATCCAAGTATGGACGGAATTTTAA
ACTAGGAGAGACTACGGACG

Downstream 100 bases:

>100_bases
TAATCTAGGTAACATTCGGAGGAAAATATGAATTTTTTTGTTAATGAAGCAATGGGAATTGGAAATTCTGGAGTAGAACA
TGCGCAATTTTATCGAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFNQLPLLKEGEQYHIVVNAEVI
PSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAYDLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVS
IWDKEEDFFEEVPVYIRNRTLNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV
SLAKNDEKVMLVEKTASIELAKILHYYRGQSF

Sequences:

>Translated_272_residues
MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFNQLPLLKEGEQYHIVVNAEVI
PSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAYDLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVS
IWDKEEDFFEEVPVYIRNRTLNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV
SLAKNDEKVMLVEKTASIELAKILHYYRGQSF
>Mature_272_residues
MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFNQLPLLKEGEQYHIVVNAEVI
PSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAYDLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVS
IWDKEEDFFEEVPVYIRNRTLNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV
SLAKNDEKVMLVEKTASIELAKILHYYRGQSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30917; Mature: 30917

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFN
CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC
QLPLLKEGEQYHIVVNAEVIPSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAY
CCCCEECCCEEEEEEEEEEECCCCEEEEEEEHHHHHHHHCCEEEEECCCEEECCCCCEEE
DLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVSIWDKEEDFFEEVPVYIRNRT
EEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHCCEEEEEEE
LNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV
ECCCHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH
SLAKNDEKVMLVEKTASIELAKILHYYRGQSF
HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFN
CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC
QLPLLKEGEQYHIVVNAEVIPSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAY
CCCCEECCCEEEEEEEEEEECCCCEEEEEEEHHHHHHHHCCEEEEECCCEEECCCCCEEE
DLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVSIWDKEEDFFEEVPVYIRNRT
EEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHCCEEEEEEE
LNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV
ECCCHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH
SLAKNDEKVMLVEKTASIELAKILHYYRGQSF
HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA