| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491884
Identifier: 116491884
GI number: 116491884
Start: 70815
End: 71633
Strand: Direct
Name: 116491884
Synonym: PEPE_0066
Alternate gene names: NA
Gene position: 70815-71633 (Clockwise)
Preceding gene: 116491883
Following gene: 116491885
Centisome position: 3.86
GC content: 35.9
Gene sequence:
>819_bases ATGAATAGTTCTTATGTTGTAATGTGGCCCATGGCGACCAATGGAACCTACAATTACGGTTCTACAATTAGTTATGAAAA AGGTTTAGTTAATTTTAGTAATAGTCAAATGAGCCCAGGTGAAGCAATTTCAAGTTGGAAATCAAAGCAAGACTTCGATT CCAATAATGCTCAATTTAACCAATTACCTTTGCTAAAGGAAGGTGAACAATATCATATTGTGGTTAATGCAGAAGTAATT CCTAGTAACTCAGTCCAGGTTCAAATCAATTTTTTGGACACGTTGGGGGAAACTATTGATGGTATCACCACCCTAAGTTT GGATGATTATTTTGAAGTCCCCTTGGGAACCCAAGCTTATGATTTAAACTTAATTAACTTAAATAATCAAGGCCTAACGT TTAAAAATATCGTCATTACTCCACGAGATACCAAATTTGAAATTGAAACTTTTAGTAGTGGTACTTTTCGAATGGTTAGT ATCTGGGATAAGGAAGAAGATTTCTTCGAGGAAGTGCCGGTTTACATTCGAAATCGAACTCTGAATATGGGATCGTACAT TGGTCAAAATCAAGCGTTAAGACTGTACATCGAATTTGATAGTAGGAGTCTTTTAACGGAAACAGAGCTTCAAAGTGAAC TCCAGCTAGCCATTCATGATTTAAAAGATATGGTTGAGGGACGTAATTTAGCTTTCGATGCTTTTGCTCCTGACCCAGTA AGTCTGGCAAAAAATGATGAAAAAGTAATGTTAGTGGAGAAAACTGCAAGTATCGAGTTAGCAAAAATCTTGCATTATTA TCGAGGGCAATCTTTCTAA
Upstream 100 bases:
>100_bases GATGATACTAACGGGATTGTTGAGTGGTTCTTAATGCAGATTCGAAATATTTTAACATCCAAGTATGGACGGAATTTTAA ACTAGGAGAGACTACGGACG
Downstream 100 bases:
>100_bases TAATCTAGGTAACATTCGGAGGAAAATATGAATTTTTTTGTTAATGAAGCAATGGGAATTGGAAATTCTGGAGTAGAACA TGCGCAATTTTATCGAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFNQLPLLKEGEQYHIVVNAEVI PSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAYDLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVS IWDKEEDFFEEVPVYIRNRTLNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV SLAKNDEKVMLVEKTASIELAKILHYYRGQSF
Sequences:
>Translated_272_residues MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFNQLPLLKEGEQYHIVVNAEVI PSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAYDLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVS IWDKEEDFFEEVPVYIRNRTLNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV SLAKNDEKVMLVEKTASIELAKILHYYRGQSF >Mature_272_residues MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFNQLPLLKEGEQYHIVVNAEVI PSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAYDLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVS IWDKEEDFFEEVPVYIRNRTLNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV SLAKNDEKVMLVEKTASIELAKILHYYRGQSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30917; Mature: 30917
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFN CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC QLPLLKEGEQYHIVVNAEVIPSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAY CCCCEECCCEEEEEEEEEEECCCCEEEEEEEHHHHHHHHCCEEEEECCCEEECCCCCEEE DLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVSIWDKEEDFFEEVPVYIRNRT EEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHCCEEEEEEE LNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV ECCCHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH SLAKNDEKVMLVEKTASIELAKILHYYRGQSF HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNSSYVVMWPMATNGTYNYGSTISYEKGLVNFSNSQMSPGEAISSWKSKQDFDSNNAQFN CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC QLPLLKEGEQYHIVVNAEVIPSNSVQVQINFLDTLGETIDGITTLSLDDYFEVPLGTQAY CCCCEECCCEEEEEEEEEEECCCCEEEEEEEHHHHHHHHCCEEEEECCCEEECCCCCEEE DLNLINLNNQGLTFKNIVITPRDTKFEIETFSSGTFRMVSIWDKEEDFFEEVPVYIRNRT EEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHCCEEEEEEE LNMGSYIGQNQALRLYIEFDSRSLLTETELQSELQLAIHDLKDMVEGRNLAFDAFAPDPV ECCCHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH SLAKNDEKVMLVEKTASIELAKILHYYRGQSF HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA