Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491883

Identifier: 116491883

GI number: 116491883

Start: 69239

End: 70822

Strand: Direct

Name: 116491883

Synonym: PEPE_0065

Alternate gene names: NA

Gene position: 69239-70822 (Clockwise)

Preceding gene: 116491882

Following gene: 116491884

Centisome position: 3.78

GC content: 36.43

Gene sequence:

>1584_bases
ATGAAAAATAAACTCATTCATTTAGGTTTGCCAATACCAGGGTTGTCTGAGCAACTGAAGGAGAATTTTGACTATATTGA
TATCCCATTTGAAAAACTTTGGGAACCCAACGCAAAAAAAGGACTTCTTTTTATAAAAGGAAAATTAAATCCCTTATATT
TGAATGCTTTATTTTTAATCACCCAGGATGCTTATTTAAAGGAAACCGAGTTATTAAAAAAGTTGCCTGGAAATAAAACA
TTAATTGATAACACATTAACACTTCCCTTAGCCAGTCAAAATATATTGGAATTAAAAAATGCACAATTTATTGAAGTTGG
TGATATAAAAGCCCTGGTTAAGGACCTTAACCAAACTTTCTATAGTGGTCAGTGGGGATTCAAGTTTACATTCGATAACA
TTCAATTTGAGCCTTATTTTAAGGGTAGAATTGAACAGCTTGGTCATAATTATATTAGATTTATCGATCAAAATATCCAA
GCATATCAAAAAGTTGCTAATTGGGGTGGACCGTTGGGAGTGGCGGGAAACACGCTTTGGGAAATTCGAATAGAATTTAA
ACGCCAAAACCCAACTACTGATGTGCGCCTAGATGTGTCGATGATTAACCCTTATACCAATGAAATATATTATTCACAAA
GTTTTGAAAATGACCAGCTAAATGAAGTGTTGCCACTTAAGGTTAGCGAACAAGGGGCATATATTTTAGTGGAACTATTT
ATTAAAGGTAACAAGGTTGAATTAGATGTCGGACAGATTTCATTAAGAAAAGCCCGTGATGGACGGGGAACACTATTAGT
CGGCGAAAAAGAAATGGTCGATGACCAAGCAATGAATGAGCAATTATATTATTACTTTGATCCAGGAGATTTTAAGCCTC
CCTTGGTTGTTTATTTCAGTGGATTTCGTTTAGCTCTAGGAGTAGAGGGAGCTAACATGATGAGAGCGCTTGAAGCACCA
GCATTGATCTTTGGGGAGCAACGGATCTTAGGGGGATCTTTTTACGTTGGCAGTAAAAAGTTTGAACAGGAAATTGTACG
GATTATTCAAACCACTTTAAAAAAGCTCGGGTTCACTGCTAATCAATTAGTTTTATCCGGATTATCAATGGGAACGTACG
CTAGTTTATATTATTCGTCGTACCTTAATCCGGAGTGGGTAGTCGTGGGTAAACCGTTGACTAAGTTAGGCGATATAGCA
GCAAATGAACGAATTAATCGTCCCGATGCTTTTCCAACGTCTTTAGATGTTTTATTGAAACTTACCGGGGGGATTAGTAA
TGAAAATATTGAACAAGCCAATAATATTTTCTGGGATTCATTTAGAAGCCATGACCACTCCAAAACTAACTTTGTAATCA
CGTATATGAAAGAAGACGATTACGATAGAAATGCGTTCGATGATCTATACCGATACCTGCACCAAAATTCACCTAAGTCG
CGGATAATTCATAAGGGATTAACTGGACGACATAATGATGATACTAACGGGATTGTTGAGTGGTTCTTAATGCAGATTCG
AAATATTTTAACATCCAAGTATGGACGGAATTTTAAACTAGGAGAGACTACGGACGATGAATAG

Upstream 100 bases:

>100_bases
GAGCTGGGTAATTGGAATAAATCCTTAGTTGCGACAACTAAGTATATGGAACAACTAACACTTAAGCGCCAAGCCGACTG
GTGGGAAAGAAGAACTAAGT

Downstream 100 bases:

>100_bases
TTCTTATGTTGTAATGTGGCCCATGGCGACCAATGGAACCTACAATTACGGTTCTACAATTAGTTATGAAAAAGGTTTAG
TTAATTTTAGTAATAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Accessory Sec System; Accessory Secretory ; LOW QUALITY PROTEIN Accessory Sec System; Accessory Sescretory Protein

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MKNKLIHLGLPIPGLSEQLKENFDYIDIPFEKLWEPNAKKGLLFIKGKLNPLYLNALFLITQDAYLKETELLKKLPGNKT
LIDNTLTLPLASQNILELKNAQFIEVGDIKALVKDLNQTFYSGQWGFKFTFDNIQFEPYFKGRIEQLGHNYIRFIDQNIQ
AYQKVANWGGPLGVAGNTLWEIRIEFKRQNPTTDVRLDVSMINPYTNEIYYSQSFENDQLNEVLPLKVSEQGAYILVELF
IKGNKVELDVGQISLRKARDGRGTLLVGEKEMVDDQAMNEQLYYYFDPGDFKPPLVVYFSGFRLALGVEGANMMRALEAP
ALIFGEQRILGGSFYVGSKKFEQEIVRIIQTTLKKLGFTANQLVLSGLSMGTYASLYYSSYLNPEWVVVGKPLTKLGDIA
ANERINRPDAFPTSLDVLLKLTGGISNENIEQANNIFWDSFRSHDHSKTNFVITYMKEDDYDRNAFDDLYRYLHQNSPKS
RIIHKGLTGRHNDDTNGIVEWFLMQIRNILTSKYGRNFKLGETTDDE

Sequences:

>Translated_527_residues
MKNKLIHLGLPIPGLSEQLKENFDYIDIPFEKLWEPNAKKGLLFIKGKLNPLYLNALFLITQDAYLKETELLKKLPGNKT
LIDNTLTLPLASQNILELKNAQFIEVGDIKALVKDLNQTFYSGQWGFKFTFDNIQFEPYFKGRIEQLGHNYIRFIDQNIQ
AYQKVANWGGPLGVAGNTLWEIRIEFKRQNPTTDVRLDVSMINPYTNEIYYSQSFENDQLNEVLPLKVSEQGAYILVELF
IKGNKVELDVGQISLRKARDGRGTLLVGEKEMVDDQAMNEQLYYYFDPGDFKPPLVVYFSGFRLALGVEGANMMRALEAP
ALIFGEQRILGGSFYVGSKKFEQEIVRIIQTTLKKLGFTANQLVLSGLSMGTYASLYYSSYLNPEWVVVGKPLTKLGDIA
ANERINRPDAFPTSLDVLLKLTGGISNENIEQANNIFWDSFRSHDHSKTNFVITYMKEDDYDRNAFDDLYRYLHQNSPKS
RIIHKGLTGRHNDDTNGIVEWFLMQIRNILTSKYGRNFKLGETTDDE
>Mature_527_residues
MKNKLIHLGLPIPGLSEQLKENFDYIDIPFEKLWEPNAKKGLLFIKGKLNPLYLNALFLITQDAYLKETELLKKLPGNKT
LIDNTLTLPLASQNILELKNAQFIEVGDIKALVKDLNQTFYSGQWGFKFTFDNIQFEPYFKGRIEQLGHNYIRFIDQNIQ
AYQKVANWGGPLGVAGNTLWEIRIEFKRQNPTTDVRLDVSMINPYTNEIYYSQSFENDQLNEVLPLKVSEQGAYILVELF
IKGNKVELDVGQISLRKARDGRGTLLVGEKEMVDDQAMNEQLYYYFDPGDFKPPLVVYFSGFRLALGVEGANMMRALEAP
ALIFGEQRILGGSFYVGSKKFEQEIVRIIQTTLKKLGFTANQLVLSGLSMGTYASLYYSSYLNPEWVVVGKPLTKLGDIA
ANERINRPDAFPTSLDVLLKLTGGISNENIEQANNIFWDSFRSHDHSKTNFVITYMKEDDYDRNAFDDLYRYLHQNSPKS
RIIHKGLTGRHNDDTNGIVEWFLMQIRNILTSKYGRNFKLGETTDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60372; Mature: 60372

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLIHLGLPIPGLSEQLKENFDYIDIPFEKLWEPNAKKGLLFIKGKLNPLYLNALFLI
CCCCEEEECCCCCCHHHHHHCCCCEEECCHHHHCCCCCCCCEEEEEECCCEEEEEEEEEE
TQDAYLKETELLKKLPGNKTLIDNTLTLPLASQNILELKNAQFIEVGDIKALVKDLNQTF
ECCCHHHHHHHHHHCCCCCEEECCEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHHHHHH
YSGQWGFKFTFDNIQFEPYFKGRIEQLGHNYIRFIDQNIQAYQKVANWGGPLGVAGNTLW
CCCCCCEEEEECCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
EIRIEFKRQNPTTDVRLDVSMINPYTNEIYYSQSFENDQLNEVLPLKVSEQGAYILVELF
EEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCEECEEECCCCCEEEEEEE
IKGNKVELDVGQISLRKARDGRGTLLVGEKEMVDDQAMNEQLYYYFDPGDFKPPLVVYFS
ECCCEEEEEECCEEEEECCCCCCEEEECCHHHHCHHHCCCCEEEEECCCCCCCCEEEEEE
GFRLALGVEGANMMRALEAPALIFGEQRILGGSFYVGSKKFEQEIVRIIQTTLKKLGFTA
CEEEEEECCCHHHHHHHCCCEEEECCCEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCH
NQLVLSGLSMGTYASLYYSSYLNPEWVVVGKPLTKLGDIAANERINRPDAFPTSLDVLLK
HHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LTGGISNENIEQANNIFWDSFRSHDHSKTNFVITYMKEDDYDRNAFDDLYRYLHQNSPKS
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCHH
RIIHKGLTGRHNDDTNGIVEWFLMQIRNILTSKYGRNFKLGETTDDE
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
>Mature Secondary Structure
MKNKLIHLGLPIPGLSEQLKENFDYIDIPFEKLWEPNAKKGLLFIKGKLNPLYLNALFLI
CCCCEEEECCCCCCHHHHHHCCCCEEECCHHHHCCCCCCCCEEEEEECCCEEEEEEEEEE
TQDAYLKETELLKKLPGNKTLIDNTLTLPLASQNILELKNAQFIEVGDIKALVKDLNQTF
ECCCHHHHHHHHHHCCCCCEEECCEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHHHHHH
YSGQWGFKFTFDNIQFEPYFKGRIEQLGHNYIRFIDQNIQAYQKVANWGGPLGVAGNTLW
CCCCCCEEEEECCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
EIRIEFKRQNPTTDVRLDVSMINPYTNEIYYSQSFENDQLNEVLPLKVSEQGAYILVELF
EEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCEECEEECCCCCEEEEEEE
IKGNKVELDVGQISLRKARDGRGTLLVGEKEMVDDQAMNEQLYYYFDPGDFKPPLVVYFS
ECCCEEEEEECCEEEEECCCCCCEEEECCHHHHCHHHCCCCEEEEECCCCCCCCEEEEEE
GFRLALGVEGANMMRALEAPALIFGEQRILGGSFYVGSKKFEQEIVRIIQTTLKKLGFTA
CEEEEEECCCHHHHHHHCCCEEEECCCEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCH
NQLVLSGLSMGTYASLYYSSYLNPEWVVVGKPLTKLGDIAANERINRPDAFPTSLDVLLK
HHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LTGGISNENIEQANNIFWDSFRSHDHSKTNFVITYMKEDDYDRNAFDDLYRYLHQNSPKS
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCHH
RIIHKGLTGRHNDDTNGIVEWFLMQIRNILTSKYGRNFKLGETTDDE
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA