Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is yieF [H]

Identifier: 116491845

GI number: 116491845

Start: 26992

End: 27540

Strand: Direct

Name: yieF [H]

Synonym: PEPE_0027

Alternate gene names: 116491845

Gene position: 26992-27540 (Clockwise)

Preceding gene: 116491844

Following gene: 116491847

Centisome position: 1.47

GC content: 41.53

Gene sequence:

>549_bases
ATGGCAAAAGAAATCGGCATTATCGTTGGTAGTTTGCGTGAAGGTTCATTAAATCGACTTGTGGCAAAAACATTTGAAAG
TATCTTACCTAAAGAATACGAGGCAACGTGGATTGAGATTGGCGATTTGCCATTGTATAACGAAGATTTAGATCAAGGTG
AAATCCCAGCAGAATGGCAAAGGCTACGTGATACTGTGCAAAATGTAGCAGGGGTAATGTTCTTTACTCCTGAATATAAT
CGTTCGGTACCAGCGGCTTTAAAGAACGCAATTGATGTTGGTTCTAGACCCATGGGCGAAAACGTTTGGGGTGGCAAACC
AGCTTTGGTTGTATCGGCTTCCCCTGGAGCAATTGGTGGGTTTGGGGCAAACCAACACCTTCGCCAGTCTTTGGTATTTG
TTGATATGCCAACCCTTCAACAACCGGAAGCTTATATTGGTAATGTTCCGCAACATCTGGATGGTGACCATTTTGATCAA
TCGACTACGCAATTCTTTAGTACCATTCTTGATTCATATTTAGATTTTTTAGAGCGTTTTACTAACTAA

Upstream 100 bases:

>100_bases
TTTTAAAACGCCAACGCATATCATTATCAATTAACCACTAATTTCTCTATACTGTAGTTAAGGTATTGTTAACGCTTTAA
ATACGACAAGGAGGAATTTT

Downstream 100 bases:

>100_bases
CTTAAACTAAATTATGCAAATAAAAATAGCCTAACCAGACGGAAATTCCGTGGGTTAGGCTATTTTTCATTGTGCTTTTT
CCCCTTTAGCACGTGATCAG

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MAKEIGIIVGSLREGSLNRLVAKTFESILPKEYEATWIEIGDLPLYNEDLDQGEIPAEWQRLRDTVQNVAGVMFFTPEYN
RSVPAALKNAIDVGSRPMGENVWGGKPALVVSASPGAIGGFGANQHLRQSLVFVDMPTLQQPEAYIGNVPQHLDGDHFDQ
STTQFFSTILDSYLDFLERFTN

Sequences:

>Translated_182_residues
MAKEIGIIVGSLREGSLNRLVAKTFESILPKEYEATWIEIGDLPLYNEDLDQGEIPAEWQRLRDTVQNVAGVMFFTPEYN
RSVPAALKNAIDVGSRPMGENVWGGKPALVVSASPGAIGGFGANQHLRQSLVFVDMPTLQQPEAYIGNVPQHLDGDHFDQ
STTQFFSTILDSYLDFLERFTN
>Mature_181_residues
AKEIGIIVGSLREGSLNRLVAKTFESILPKEYEATWIEIGDLPLYNEDLDQGEIPAEWQRLRDTVQNVAGVMFFTPEYNR
SVPAALKNAIDVGSRPMGENVWGGKPALVVSASPGAIGGFGANQHLRQSLVFVDMPTLQQPEAYIGNVPQHLDGDHFDQS
TTQFFSTILDSYLDFLERFTN

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family [H]

Homologues:

Organism=Escherichia coli, GI1790149, Length=181, Percent_Identity=38.6740331491713, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20174; Mature: 20043

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEIGIIVGSLREGSLNRLVAKTFESILPKEYEATWIEIGDLPLYNEDLDQGEIPAEWQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
RLRDTVQNVAGVMFFTPEYNRSVPAALKNAIDVGSRPMGENVWGGKPALVVSASPGAIGG
HHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC
FGANQHLRQSLVFVDMPTLQQPEAYIGNVPQHLDGDHFDQSTTQFFSTILDSYLDFLERF
CCCCHHHHHHHHEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TN
CC
>Mature Secondary Structure 
AKEIGIIVGSLREGSLNRLVAKTFESILPKEYEATWIEIGDLPLYNEDLDQGEIPAEWQ
CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
RLRDTVQNVAGVMFFTPEYNRSVPAALKNAIDVGSRPMGENVWGGKPALVVSASPGAIGG
HHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC
FGANQHLRQSLVFVDMPTLQQPEAYIGNVPQHLDGDHFDQSTTQFFSTILDSYLDFLERF
CCCCHHHHHHHHEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]