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The map label for this gene is fliF [H]

Identifier: 116514986

GI number: 116514986

Start: 48902

End: 50371

Strand: Direct

Name: fliF [H]

Synonym: BCc_043

Alternate gene names: 116514986

Gene position: 48902-50371 (Clockwise)

Preceding gene: 116514985

Following gene: 116514987

Centisome position: 11.74

GC content: 15.99

Gene sequence:

>1470_bases
ATGAATTTTATTAAAAAATTATTTTTTCAAATAAAAAAGAAATTGAATTATCTTTTTTTTTGTATTTTAAAAAAAATCAA
ATATATTTTTTTTGTTTCTTTAATTAGTATAATTTCTATTATTTCAATTTTTTTATGGTCAAAAAAAGTTCATTATGTAG
TGTTATATAATAATCTTTCCCAAGAAGATAGTAAATGGATAATATCAAGATTAAAAATTTTGCATATTCCTTATCGTTGT
AATAATTCTTTTAAAACATTATTAGTTCCTGAAGATAAAATTAATATATTAAATTTGTCATTATTAAAAAATAACAATAT
CTTAAAAAAGAATTTTGGTTTTGAATTATTAGATAAAGAAAAATTTGGTATTAGTCAATTTCATGAACACATTAATTATC
ATAGAGGTTTAGAAGGAGAATTATCTAAGACCTTAGAACAAATTTTTCCTATACAATGTGCTCGTGTACATTTAGTTTGT
AAAAAAGATACTGATTTTTTTGAAAATAATCAAATTCCTTCAGCTTCAGTAATTATTACCTTATTTCCTAATATGCATTT
AACATATGAGCAAATTAATGCAATTATTTTATTAATTTCAGGAAGTGTTCCTGATTTATCTTCAGATAATATTGTTTTAG
TTGATCAATTTGGAAATATATTAAATAAATATGATTTAAATCATACAAAGTTTTTTAATAATAGTCAATATAAAAAAATT
ACTATATTAGAAGAATATTATTCTCAACGTATTAAAGATATTTTACTTCCAATTTTAGATTCAAAAGATTTTGTTGTTCA
AGTTACTACTAAATTAAAAAAAGATAATCATGCTTCTACATTTTCTGATAAAAATTATAATGTAAATCAAAAAATAGATA
ATTCTTTTATATCTCCAAATTTTAAAGAATTAAATATTAAAAATATTAAAATTACTGTATTAATTAATTATAAAAAAAAT
AATTCTGGTAAAATGGTTCCATTATCAAAAAATGAATTAAATAATATAGAAAATTTAGTTAAATCAGTAATTAATTTATC
AAAAAATAAATTAAATAATATAGAAAATTTAGTTAAATCAGTAATTAATTTATCAAAAAATAAAGGTGATCGTATAAATT
TGATTAATTATATGTTTTTAGATACTCCTAGTGTTATTGATGCATCTTATTCTTTAAAAAATAAAAATTTAAATTTTTCT
TTAATTTTGTTTTATTTTTTTGTTTTTTTTCTGTTTTTTTTAATTTTAAAAAATATTTTTGATAGTTATATATTTAATAA
AAATAAAAAAAAAAATATTATAAATATACCTGTAAAAGATAATAAAAAAAAAAAAATAATTAATGATATTAATAATCAAT
TAAATAATCAAGAAAAAAATAAGAATTATTTTTTATCAAAAAAAAATATTATTTTAAAAAAATCTAATTTAATAAAAGAT
ATTATACAATATTGGATAAAGAAAAAATGA

Upstream 100 bases:

>100_bases
TATTCATGATAATATTTTTATATTATTATATATAATAATGCAATATTTACTTGTTTTTTTTTTAAATTATTTTTTGTTTT
ATTATTTCTGGAAAAGAACT

Downstream 100 bases:

>100_bases
TATATTTAAATGGTATACAAAAAAGTGTATTATTATTATTTTGTATAGATACTAAAGAAATAATTCATGTTTTAAAAAAT
TTTAAGAAATCAGAAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNFIKKLFFQIKKKLNYLFFCILKKIKYIFFVSLISIISIISIFLWSKKVHYVVLYNNLSQEDSKWIISRLKILHIPYRC
NNSFKTLLVPEDKINILNLSLLKNNNILKKNFGFELLDKEKFGISQFHEHINYHRGLEGELSKTLEQIFPIQCARVHLVC
KKDTDFFENNQIPSASVIITLFPNMHLTYEQINAIILLISGSVPDLSSDNIVLVDQFGNILNKYDLNHTKFFNNSQYKKI
TILEEYYSQRIKDILLPILDSKDFVVQVTTKLKKDNHASTFSDKNYNVNQKIDNSFISPNFKELNIKNIKITVLINYKKN
NSGKMVPLSKNELNNIENLVKSVINLSKNKLNNIENLVKSVINLSKNKGDRINLINYMFLDTPSVIDASYSLKNKNLNFS
LILFYFFVFFLFFLILKNIFDSYIFNKNKKKNIINIPVKDNKKKKIINDINNQLNNQEKNKNYFLSKKNIILKKSNLIKD
IIQYWIKKK

Sequences:

>Translated_489_residues
MNFIKKLFFQIKKKLNYLFFCILKKIKYIFFVSLISIISIISIFLWSKKVHYVVLYNNLSQEDSKWIISRLKILHIPYRC
NNSFKTLLVPEDKINILNLSLLKNNNILKKNFGFELLDKEKFGISQFHEHINYHRGLEGELSKTLEQIFPIQCARVHLVC
KKDTDFFENNQIPSASVIITLFPNMHLTYEQINAIILLISGSVPDLSSDNIVLVDQFGNILNKYDLNHTKFFNNSQYKKI
TILEEYYSQRIKDILLPILDSKDFVVQVTTKLKKDNHASTFSDKNYNVNQKIDNSFISPNFKELNIKNIKITVLINYKKN
NSGKMVPLSKNELNNIENLVKSVINLSKNKLNNIENLVKSVINLSKNKGDRINLINYMFLDTPSVIDASYSLKNKNLNFS
LILFYFFVFFLFFLILKNIFDSYIFNKNKKKNIINIPVKDNKKKKIINDINNQLNNQEKNKNYFLSKKNIILKKSNLIKD
IIQYWIKKK
>Mature_489_residues
MNFIKKLFFQIKKKLNYLFFCILKKIKYIFFVSLISIISIISIFLWSKKVHYVVLYNNLSQEDSKWIISRLKILHIPYRC
NNSFKTLLVPEDKINILNLSLLKNNNILKKNFGFELLDKEKFGISQFHEHINYHRGLEGELSKTLEQIFPIQCARVHLVC
KKDTDFFENNQIPSASVIITLFPNMHLTYEQINAIILLISGSVPDLSSDNIVLVDQFGNILNKYDLNHTKFFNNSQYKKI
TILEEYYSQRIKDILLPILDSKDFVVQVTTKLKKDNHASTFSDKNYNVNQKIDNSFISPNFKELNIKNIKITVLINYKKN
NSGKMVPLSKNELNNIENLVKSVINLSKNKLNNIENLVKSVINLSKNKGDRINLINYMFLDTPSVIDASYSLKNKNLNFS
LILFYFFVFFLFFLILKNIFDSYIFNKNKKKNIINIPVKDNKKKKIINDINNQLNNQEKNKNYFLSKKNIILKKSNLIKD
IIQYWIKKK

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=410, Percent_Identity=31.7073170731707, Blast_Score=198, Evalue=5e-52,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 57566; Mature: 57566

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIKKLFFQIKKKLNYLFFCILKKIKYIFFVSLISIISIISIFLWSKKVHYVVLYNNLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
QEDSKWIISRLKILHIPYRCNNSFKTLLVPEDKINILNLSLLKNNNILKKNFGFELLDKE
CCHHHHHHHHHHHEEECEEECCCEEEEEECCCCEEEEEEEEECCCCEEEECCCCEEECCC
KFGISQFHEHINYHRGLEGELSKTLEQIFPIQCARVHLVCKKDTDFFENNQIPSASVIIT
CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEE
LFPNMHLTYEQINAIILLISGSVPDLSSDNIVLVDQFGNILNKYDLNHTKFFNNSQYKKI
ECCCCEEEHHHCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCEECCCCCCEEE
TILEEYYSQRIKDILLPILDSKDFVVQVTTKLKKDNHASTFSDKNYNVNQKIDNSFISPN
EEHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FKELNIKNIKITVLINYKKNNSGKMVPLSKNELNNIENLVKSVINLSKNKLNNIENLVKS
CCEEEEEEEEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VINLSKNKGDRINLINYMFLDTPSVIDASYSLKNKNLNFSLILFYFFVFFLFFLILKNIF
HHHHCCCCCCEEEEEEEEEECCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DSYIFNKNKKKNIINIPVKDNKKKKIINDINNQLNNQEKNKNYFLSKKNIILKKSNLIKD
HHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEHHHHHHH
IIQYWIKKK
HHHHHHCCC
>Mature Secondary Structure
MNFIKKLFFQIKKKLNYLFFCILKKIKYIFFVSLISIISIISIFLWSKKVHYVVLYNNLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
QEDSKWIISRLKILHIPYRCNNSFKTLLVPEDKINILNLSLLKNNNILKKNFGFELLDKE
CCHHHHHHHHHHHEEECEEECCCEEEEEECCCCEEEEEEEEECCCCEEEECCCCEEECCC
KFGISQFHEHINYHRGLEGELSKTLEQIFPIQCARVHLVCKKDTDFFENNQIPSASVIIT
CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEE
LFPNMHLTYEQINAIILLISGSVPDLSSDNIVLVDQFGNILNKYDLNHTKFFNNSQYKKI
ECCCCEEEHHHCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCEECCCCCCEEE
TILEEYYSQRIKDILLPILDSKDFVVQVTTKLKKDNHASTFSDKNYNVNQKIDNSFISPN
EEHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FKELNIKNIKITVLINYKKNNSGKMVPLSKNELNNIENLVKSVINLSKNKLNNIENLVKS
CCEEEEEEEEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VINLSKNKGDRINLINYMFLDTPSVIDASYSLKNKNLNFSLILFYFFVFFLFFLILKNIF
HHHHCCCCCCEEEEEEEEEECCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DSYIFNKNKKKNIINIPVKDNKKKKIINDINNQLNNQEKNKNYFLSKKNIILKKSNLIKD
HHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEHHHHHHH
IIQYWIKKK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]