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The map label for this gene is ftsY [H]

Identifier: 116514964

GI number: 116514964

Start: 15068

End: 16108

Strand: Direct

Name: ftsY [H]

Synonym: BCc_015

Alternate gene names: 116514964

Gene position: 15068-16108 (Clockwise)

Preceding gene: 116514961

Following gene: 116514965

Centisome position: 3.62

GC content: 18.92

Gene sequence:

>1041_bases
ATGTGTGGTAAAAAAAATTTTTTTTCTCATTTAAATATTTTTTCTAAAAAAAAAAATGTTTTAAATAAAGATTTAAAAAG
TAAAGATAAGATAGATAATATTAGTGATAATAAAAAATCAAAGATTGGTATTTTTTCTTTTTTAAAAAATTATTGGAATT
CTACAAAAGATATTTTTACTAAAAAATTAAAAAATATATTTTTAAACAAAAATTTAGATAAAAAGTTTTTTAAAAAATTG
GAAGATATATTATTATCTTCTGATTTTGGGGTTCAATCTACTAAAAAAATATTAAATTTATTTAAAGAAAAAATAAAAAA
AAATAATATTACAGATACTAAAATAGCTAAAGTTTATTTTAAAGAAATATTATTAAAAATTTTAAAAAAATCAAGTAAAT
TTTCTGATAAGAATAATTATAGTAATCTATTAATTATTTTGGTTGTTGGAATTAATGGGGTGGGAAAAACTACTGCAGTA
GTAAAATTAGCAAATTATTATAAAAATTTAGGAAAATCCGTTATTCTTTCTGCTTGTGATACTTTTAGATCTGCAGCAAT
AGATCAACTAATAGATTTAGGTAATTTATATAATATTGAAATATTTTATAAATCTATTGGTTCTGATCCTTCTTCTGTTG
CTTTTGATTCAATAATATATGCTAAAAAAAAAAAAATTGATATAGTTATTATTGATACAGCTGGACGTATGCATAATAAA
ATGCATTTGATTCAAGAATTAAAAAAAATGAATAGAGTTATTAAAAAATGCTGTTCTACAGCTTTTTATAAAACTTATTT
AGTTATTGATGCTGGAATTGGTCAAAATTCAATACAACAAGCAAAAATATTTTCTTCTGAAATAAATATTTCTGGTTCTA
TTATTACTAAATTAGATAGTACAGCTAAAGGTGGTATAATTTTTTCTATTATTAATGATTTAAAAATACCAATTTGTTAT
ATCAGCGCAGGGGAAAAAATAACAGATTTTAATATTTTTGATTATAAATATTTCATTGAGAATTTTTATAATATTTTTTA
A

Upstream 100 bases:

>100_bases
TCTTTCTTTTTATTTTTTTTTTCATTTTTATAATTTTACTATAAAAGTATTTTATTATTGATATAATAGAGTTATTATAA
TAAATAATTTTGAGGTTAAT

Downstream 100 bases:

>100_bases
AAAATGATATAATTATTATCTTTTAGATAATTTTTTTTTTATTAAAATAAAATATTTTATATTTAGGAAAAAATGAAAAA
ATTAGAAAGTCAAATTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MCGKKNFFSHLNIFSKKKNVLNKDLKSKDKIDNISDNKKSKIGIFSFLKNYWNSTKDIFTKKLKNIFLNKNLDKKFFKKL
EDILLSSDFGVQSTKKILNLFKEKIKKNNITDTKIAKVYFKEILLKILKKSSKFSDKNNYSNLLIILVVGINGVGKTTAV
VKLANYYKNLGKSVILSACDTFRSAAIDQLIDLGNLYNIEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNK
MHLIQELKKMNRVIKKCCSTAFYKTYLVIDAGIGQNSIQQAKIFSSEINISGSIITKLDSTAKGGIIFSIINDLKIPICY
ISAGEKITDFNIFDYKYFIENFYNIF

Sequences:

>Translated_346_residues
MCGKKNFFSHLNIFSKKKNVLNKDLKSKDKIDNISDNKKSKIGIFSFLKNYWNSTKDIFTKKLKNIFLNKNLDKKFFKKL
EDILLSSDFGVQSTKKILNLFKEKIKKNNITDTKIAKVYFKEILLKILKKSSKFSDKNNYSNLLIILVVGINGVGKTTAV
VKLANYYKNLGKSVILSACDTFRSAAIDQLIDLGNLYNIEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNK
MHLIQELKKMNRVIKKCCSTAFYKTYLVIDAGIGQNSIQQAKIFSSEINISGSIITKLDSTAKGGIIFSIINDLKIPICY
ISAGEKITDFNIFDYKYFIENFYNIF
>Mature_346_residues
MCGKKNFFSHLNIFSKKKNVLNKDLKSKDKIDNISDNKKSKIGIFSFLKNYWNSTKDIFTKKLKNIFLNKNLDKKFFKKL
EDILLSSDFGVQSTKKILNLFKEKIKKNNITDTKIAKVYFKEILLKILKKSSKFSDKNNYSNLLIILVVGINGVGKTTAV
VKLANYYKNLGKSVILSACDTFRSAAIDQLIDLGNLYNIEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNK
MHLIQELKKMNRVIKKCCSTAFYKTYLVIDAGIGQNSIQQAKIFSSEINISGSIITKLDSTAKGGIIFSIINDLKIPICY
ISAGEKITDFNIFDYKYFIENFYNIF

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=231, Percent_Identity=32.4675324675325, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI4507215, Length=283, Percent_Identity=29.3286219081272, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI23308697, Length=328, Percent_Identity=25, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI295424842, Length=328, Percent_Identity=25, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI89061728, Length=139, Percent_Identity=33.0935251798561, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1789874, Length=320, Percent_Identity=40, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1788963, Length=293, Percent_Identity=26.962457337884, Blast_Score=118, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17539958, Length=290, Percent_Identity=30.3448275862069, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=218, Percent_Identity=26.605504587156, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325345, Length=314, Percent_Identity=33.7579617834395, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=248, Percent_Identity=30.241935483871, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=201, Percent_Identity=31.8407960199005, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24641198, Length=351, Percent_Identity=23.3618233618234, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 39450; Mature: 39450

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGKKNFFSHLNIFSKKKNVLNKDLKSKDKIDNISDNKKSKIGIFSFLKNYWNSTKDIFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
KKLKNIFLNKNLDKKFFKKLEDILLSSDFGVQSTKKILNLFKEKIKKNNITDTKIAKVYF
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KEILLKILKKSSKFSDKNNYSNLLIILVVGINGVGKTTAVVKLANYYKNLGKSVILSACD
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFRSAAIDQLIDLGNLYNIEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNK
HHHHHHHHHHHHCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHH
MHLIQELKKMNRVIKKCCSTAFYKTYLVIDAGIGQNSIQQAKIFSSEINISGSIITKLDS
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCC
TAKGGIIFSIINDLKIPICYISAGEKITDFNIFDYKYFIENFYNIF
CCCCCEEEEEHHCCCCEEEEEECCCEEECCEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MCGKKNFFSHLNIFSKKKNVLNKDLKSKDKIDNISDNKKSKIGIFSFLKNYWNSTKDIFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
KKLKNIFLNKNLDKKFFKKLEDILLSSDFGVQSTKKILNLFKEKIKKNNITDTKIAKVYF
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KEILLKILKKSSKFSDKNNYSNLLIILVVGINGVGKTTAVVKLANYYKNLGKSVILSACD
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFRSAAIDQLIDLGNLYNIEIFYKSIGSDPSSVAFDSIIYAKKKKIDIVIIDTAGRMHNK
HHHHHHHHHHHHCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHH
MHLIQELKKMNRVIKKCCSTAFYKTYLVIDAGIGQNSIQQAKIFSSEINISGSIITKLDS
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCC
TAKGGIIFSIINDLKIPICYISAGEKITDFNIFDYKYFIENFYNIF
CCCCCEEEEEHHCCCCEEEEEECCCEEECCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]