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The map label for this gene is efp [H]

Identifier: 116514961

GI number: 116514961

Start: 12893

End: 13465

Strand: Direct

Name: efp [H]

Synonym: BCc_012

Alternate gene names: 116514961

Gene position: 12893-13465 (Clockwise)

Preceding gene: 116514960

Following gene: 116514964

Centisome position: 3.1

GC content: 23.21

Gene sequence:

>573_bases
ATGAAAGAATCTTATAGTGGCAATTCTTTAAAATCAGGTTTAAAAATTTTAATACAAAATCAACCTTATGAAATTCTTTT
TAGTGAATTTATCAAACCAGGAAAAGGACAAGCTTTTGTTAGAATAAAGTTAAAACAATTATTAACTGGAAAATTGTTTC
ATCAAACAGTAAAAGCAACAGATATTTTTTATTCTGCTGATATTACAGAAATTAATGTATCTTATTTATATAATAATGGA
TTGAATTGGATTTTTATGTGTAAAAAAAATTTTGAACATATTTATGTTTTAAAAAAATTTTTATTTGGATGTGAAAAATG
GTTAACAAATACTTCTAATTGCATAATTATGTTATGGAATAGTTCTCCTATTTCTGTATATATAGAAAATTTTATACAAT
TAAAAGTCATAGATTTTAATGTAGCAGTACAGGGAGATACAGTAAATTCATCTAGTAAATCAGTTACATTAGAAACCGGA
GCTAAAGTACGAGTACCTTTATTTATTAAAAAAGGAGACTATATTAAAATAGATACTCGTATTGGAAAATATATATCACG
TGTTAATAAATGA

Upstream 100 bases:

>100_bases
GTTATTATACTTTATTTAGTATACTTCATAATTTCCTTGTTCTCTTTTTCGTTCTTTGAGAACAAGGGATTTCATATTTT
ATATGTGAGAGATAATTAAT

Downstream 100 bases:

>100_bases
TTTTTATCATTAACTATTTTAATATTCATTTCCAGATATATTTTTTCGATAGCTATCCCATTCAAATGTTAACCATAAGC
TATTTCCTATGCACATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKESYSGNSLKSGLKILIQNQPYEILFSEFIKPGKGQAFVRIKLKQLLTGKLFHQTVKATDIFYSADITEINVSYLYNNG
LNWIFMCKKNFEHIYVLKKFLFGCEKWLTNTSNCIIMLWNSSPISVYIENFIQLKVIDFNVAVQGDTVNSSSKSVTLETG
AKVRVPLFIKKGDYIKIDTRIGKYISRVNK

Sequences:

>Translated_190_residues
MKESYSGNSLKSGLKILIQNQPYEILFSEFIKPGKGQAFVRIKLKQLLTGKLFHQTVKATDIFYSADITEINVSYLYNNG
LNWIFMCKKNFEHIYVLKKFLFGCEKWLTNTSNCIIMLWNSSPISVYIENFIQLKVIDFNVAVQGDTVNSSSKSVTLETG
AKVRVPLFIKKGDYIKIDTRIGKYISRVNK
>Mature_190_residues
MKESYSGNSLKSGLKILIQNQPYEILFSEFIKPGKGQAFVRIKLKQLLTGKLFHQTVKATDIFYSADITEINVSYLYNNG
LNWIFMCKKNFEHIYVLKKFLFGCEKWLTNTSNCIIMLWNSSPISVYIENFIQLKVIDFNVAVQGDTVNSSSKSVTLETG
AKVRVPLFIKKGDYIKIDTRIGKYISRVNK

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI1790590, Length=185, Percent_Identity=45.945945945946, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 21816; Mature: 21816

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESYSGNSLKSGLKILIQNQPYEILFSEFIKPGKGQAFVRIKLKQLLTGKLFHQTVKAT
CCCCCCCCCHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHH
DIFYSADITEINVSYLYNNGLNWIFMCKKNFEHIYVLKKFLFGCEKWLTNTSNCIIMLWN
EEEEECCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
SSPISVYIENFIQLKVIDFNVAVQGDTVNSSSKSVTLETGAKVRVPLFIKKGDYIKIDTR
CCCEEEEEECEEEEEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCEEEEEHH
IGKYISRVNK
HHHHHHHHCC
>Mature Secondary Structure
MKESYSGNSLKSGLKILIQNQPYEILFSEFIKPGKGQAFVRIKLKQLLTGKLFHQTVKAT
CCCCCCCCCHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHH
DIFYSADITEINVSYLYNNGLNWIFMCKKNFEHIYVLKKFLFGCEKWLTNTSNCIIMLWN
EEEEECCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
SSPISVYIENFIQLKVIDFNVAVQGDTVNSSSKSVTLETGAKVRVPLFIKKGDYIKIDTR
CCCEEEEEECEEEEEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCEEEEEHH
IGKYISRVNK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA