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The map label for this gene is yqaA [C]

Identifier: 116332646

GI number: 116332646

Start: 257689

End: 258147

Strand: Reverse

Name: yqaA [C]

Synonym: LBJ_4226

Alternate gene names: 116332646

Gene position: 258147-257689 (Counterclockwise)

Preceding gene: 116332647

Following gene: 116332640

Centisome position: 86.12

GC content: 44.01

Gene sequence:

>459_bases
GTGGAACAGAACTTTTGGGAAATTCTTTCTAAATTGATTCCAATGTATGGCGGCGTTGGACTTGTGATTGTTTCCTTTGT
TGCGGCGACGATTCTTCCGTTTAGTTCCGAGGCGGCCTTAACTCTTGCGATTGTTTCGGGACTTTCTCCGTTGGAAGCGG
TTCTTTGGGCTTCGTTCGGGAATTGTACTGCTTGTATGGTTAACTATTTCCTCGGTCGCGGTTCGGAAGTATTCGTTCGT
AAAAAGTTGGAATCTTCTCCAACGTTTCAAAATCTCTATCAAAAGATGAACACGATCGGTTGGCCGATCTTGTTGTTGTC
CTTTTTACCTGTCATCGGAGATCCGATTACCATTCTTGCCGGGTTTTTGAGACAGAGACTATGGTTGTTCGTGAGTATCG
TATTCACTTTGCGGATCGTTCGTTACGTTTTACTAACGTTCGTCTTGATTCGATCGTAA

Upstream 100 bases:

>100_bases
CACAAAAGGTTATATTCAAACTTGTTGAAGATGGAGTCGAAGCGGTTTCGACGGAAACGGCCGAAAATTTTGCAGTTTTT
TTAACGGAAGAGGAGTAGCA

Downstream 100 bases:

>100_bases
AAATTTGTTTTCAATCAATCCGTTTGTCTGTGGGTTTCGGCGAATCTTTGATTCTAAAACAAAGACGTTATATCATGATC
CTAATAGTTCAACTTGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; Integral Membrane Protein; SNARE Associated Golgi Protein-Related Protein; Cytoplasmic Membrane Protein; SNARE Associated Golgi Protein-Like Protein; Inner Membrane Protein YqaA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MEQNFWEILSKLIPMYGGVGLVIVSFVAATILPFSSEAALTLAIVSGLSPLEAVLWASFGNCTACMVNYFLGRGSEVFVR
KKLESSPTFQNLYQKMNTIGWPILLLSFLPVIGDPITILAGFLRQRLWLFVSIVFTLRIVRYVLLTFVLIRS

Sequences:

>Translated_152_residues
MEQNFWEILSKLIPMYGGVGLVIVSFVAATILPFSSEAALTLAIVSGLSPLEAVLWASFGNCTACMVNYFLGRGSEVFVR
KKLESSPTFQNLYQKMNTIGWPILLLSFLPVIGDPITILAGFLRQRLWLFVSIVFTLRIVRYVLLTFVLIRS
>Mature_152_residues
MEQNFWEILSKLIPMYGGVGLVIVSFVAATILPFSSEAALTLAIVSGLSPLEAVLWASFGNCTACMVNYFLGRGSEVFVR
KKLESSPTFQNLYQKMNTIGWPILLLSFLPVIGDPITILAGFLRQRLWLFVSIVFTLRIVRYVLLTFVLIRS

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16997; Mature: 16997

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNFWEILSKLIPMYGGVGLVIVSFVAATILPFSSEAALTLAIVSGLSPLEAVLWASFG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCC
NCTACMVNYFLGRGSEVFVRKKLESSPTFQNLYQKMNTIGWPILLLSFLPVIGDPITILA
CHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
GFLRQRLWLFVSIVFTLRIVRYVLLTFVLIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQNFWEILSKLIPMYGGVGLVIVSFVAATILPFSSEAALTLAIVSGLSPLEAVLWASFG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCC
NCTACMVNYFLGRGSEVFVRKKLESSPTFQNLYQKMNTIGWPILLLSFLPVIGDPITILA
CHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
GFLRQRLWLFVSIVFTLRIVRYVLLTFVLIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA