| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332621
Identifier: 116332621
GI number: 116332621
Start: 225655
End: 227544
Strand: Reverse
Name: 116332621
Synonym: LBJ_4195
Alternate gene names: NA
Gene position: 227544-225655 (Counterclockwise)
Preceding gene: 116332624
Following gene: 116332602
Centisome position: 75.91
GC content: 42.75
Gene sequence:
>1890_bases ATGATTCGTTTGATAATAGTTTTGTTGGTTTCAATTGGAGTTGACTTTTCCTACGGAGTGAATTCCGCACTTATCGATAT TGTATCTAGATCCATCCCTGGTTCGATCATTCAAAAGCCCACGGATACTCCGCAGGATAGGGCTATCAAGATCGTTATAC ATGACAGAGGGAAGTTTTGTTACGCTCCTGTTTTTAGCGGTGGTGAAAGTTATATTCGGATTCTACAGTGTTGGGAACAA GATGTTAGTGATGCAAGATATGATGTGTTTCAAAGGATTTCTTACTATATTAAAAACACATGGTTATGCATTACTGCTCC GGAAAGCGTAGTTCAGGGAAGGGTAAACTGGGATTATGTGAATCTCAGACCTTGTACGATCAATGATCCTTTGCAGCGAT GGATCGTGAAGGAGAACGCCTTTTGGACTGCAGATGAACGTTATCGTTTGAAAGACGTGGGGTGGTATGCCTATATCTCA AAAACCTCTTCGGATTACTATAACCATACCTTAGATTCTTCGATGAATAATTGGGTTCGAACTGTGTCGACTCCCGGCAA CATCAGTATAAAGACTTCCATAGCTTGGCATTTGGGGAGTGCGCGGTATTTTATTAATTCAAGAGGCTCCAAAAAAAATA CTACCCCAATCTACTACAATCCTGAAAGCGGCCATCTTGCTCAATACAATCCTATGAGTGGCCGTCTTTCTTGCATGTAT TCTAAGGTAGGTAGTTATCAATGGAATTGGATTCAATGGGCATTGTGTAGTGACGCTCCTATCAGTAAAGATAATCCGGC TTATTGGAACGTTTATCTTGAAACTGAAGAGGGAGGTATGCTCACGGATTATAAAGGTAATATCCTCAGAGTTACCAGAT ATGGACCGAATTGGGGTGTTGCCTATGCGGTTAAACCCTCATTTTTGGTAAAGGATGCTACCCATAGTCCCACGTCTTTG TTTGTAGTTGATAAAGACTTACTTGATTGGATACGTTACACAACTGGTAATCTTGGAAAGACAGAACAGTATTGTCCTGC CGGTTATAGGTCAGTCTATAAAAGGGTAAAAAGGACCTTACCTCCGGACTTTCAATTAAGCGATGATTGGATTCGGAGAC TTTATGAGATAGCGGTTTCAGCTACACCCGAAGCTGCTCAGGTGGTGCATGGGATGTGCGGCGTCTGTATGCTTCAGAGC TTCCAAATGTTAGCAGAGCTGCAGGAGTATCATTTTCAAGGACCTCTTCAGAGTGGAGGTTATTTTTTCGATACAGCTCG TGATAGGGATCCTTTTATTTCGTTCGGACAACATTATCCGTTATTGGACATGTTGCTGACGGATGTGCCTAGAATATATG GTCTCGACGGCAATACAACTAGATTACTGGGGTTAGCATCCGCTAGGACTATGTTGCCTCAGTACGACTGGATTGTCTCT GATGAATTTCTTACTCGGCCTGAAATAATATCTCACATTAATTCACTCATCCATTCTCCTCCCGGAAGTATTTGGTTGGG GATGTTGGGGCGGACGCGTTCCGATGGAATTGTGGTGGGGCATGCTGTTCCAATTCTTAGGACCTCTCAAGGGTTAGTGG TAATTCAAACAACCTCGATTTTGACACCGTTTGACCTTTACAGACAAGCTCTAATGCCAACCACGGATCCGCTTCAGGTA ATTTATAACTTGGAAGCACCAGATAGGACTTTGACAGTACTGATAACTATGCAGTTAGGGGACGTTGACCACAATACATT TAACTTTATAATTTCTAACAGGAATTGCACTGGAGAAGGAGACGACAGAAGAGGTACAGGAGAATATCCAACCAGTACAT CAGTGAATCAGTGTTCCGGGGAAGGCAGCAGGTGCGCATTACCGTTTTAA
Upstream 100 bases:
>100_bases TGTTTAAAATAAACGGATTATCATTGATTACTATTAGAATGTTTGAAACTATGAAAAACCATTTTCTTTGAAAAATAAAA AGGGAGAGGGAGGGATACAA
Downstream 100 bases:
>100_bases CTCAATGAGCGATTTCTTGGAATTATAGCAGGAAGAAAAAAGATCGTTGACTCTCCCCTACTTCGATTGGGTTTCTGGAT AAGTTTTAAATAATGTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MIRLIIVLLVSIGVDFSYGVNSALIDIVSRSIPGSIIQKPTDTPQDRAIKIVIHDRGKFCYAPVFSGGESYIRILQCWEQ DVSDARYDVFQRISYYIKNTWLCITAPESVVQGRVNWDYVNLRPCTINDPLQRWIVKENAFWTADERYRLKDVGWYAYIS KTSSDYYNHTLDSSMNNWVRTVSTPGNISIKTSIAWHLGSARYFINSRGSKKNTTPIYYNPESGHLAQYNPMSGRLSCMY SKVGSYQWNWIQWALCSDAPISKDNPAYWNVYLETEEGGMLTDYKGNILRVTRYGPNWGVAYAVKPSFLVKDATHSPTSL FVVDKDLLDWIRYTTGNLGKTEQYCPAGYRSVYKRVKRTLPPDFQLSDDWIRRLYEIAVSATPEAAQVVHGMCGVCMLQS FQMLAELQEYHFQGPLQSGGYFFDTARDRDPFISFGQHYPLLDMLLTDVPRIYGLDGNTTRLLGLASARTMLPQYDWIVS DEFLTRPEIISHINSLIHSPPGSIWLGMLGRTRSDGIVVGHAVPILRTSQGLVVIQTTSILTPFDLYRQALMPTTDPLQV IYNLEAPDRTLTVLITMQLGDVDHNTFNFIISNRNCTGEGDDRRGTGEYPTSTSVNQCSGEGSRCALPF
Sequences:
>Translated_629_residues MIRLIIVLLVSIGVDFSYGVNSALIDIVSRSIPGSIIQKPTDTPQDRAIKIVIHDRGKFCYAPVFSGGESYIRILQCWEQ DVSDARYDVFQRISYYIKNTWLCITAPESVVQGRVNWDYVNLRPCTINDPLQRWIVKENAFWTADERYRLKDVGWYAYIS KTSSDYYNHTLDSSMNNWVRTVSTPGNISIKTSIAWHLGSARYFINSRGSKKNTTPIYYNPESGHLAQYNPMSGRLSCMY SKVGSYQWNWIQWALCSDAPISKDNPAYWNVYLETEEGGMLTDYKGNILRVTRYGPNWGVAYAVKPSFLVKDATHSPTSL FVVDKDLLDWIRYTTGNLGKTEQYCPAGYRSVYKRVKRTLPPDFQLSDDWIRRLYEIAVSATPEAAQVVHGMCGVCMLQS FQMLAELQEYHFQGPLQSGGYFFDTARDRDPFISFGQHYPLLDMLLTDVPRIYGLDGNTTRLLGLASARTMLPQYDWIVS DEFLTRPEIISHINSLIHSPPGSIWLGMLGRTRSDGIVVGHAVPILRTSQGLVVIQTTSILTPFDLYRQALMPTTDPLQV IYNLEAPDRTLTVLITMQLGDVDHNTFNFIISNRNCTGEGDDRRGTGEYPTSTSVNQCSGEGSRCALPF >Mature_629_residues MIRLIIVLLVSIGVDFSYGVNSALIDIVSRSIPGSIIQKPTDTPQDRAIKIVIHDRGKFCYAPVFSGGESYIRILQCWEQ DVSDARYDVFQRISYYIKNTWLCITAPESVVQGRVNWDYVNLRPCTINDPLQRWIVKENAFWTADERYRLKDVGWYAYIS KTSSDYYNHTLDSSMNNWVRTVSTPGNISIKTSIAWHLGSARYFINSRGSKKNTTPIYYNPESGHLAQYNPMSGRLSCMY SKVGSYQWNWIQWALCSDAPISKDNPAYWNVYLETEEGGMLTDYKGNILRVTRYGPNWGVAYAVKPSFLVKDATHSPTSL FVVDKDLLDWIRYTTGNLGKTEQYCPAGYRSVYKRVKRTLPPDFQLSDDWIRRLYEIAVSATPEAAQVVHGMCGVCMLQS FQMLAELQEYHFQGPLQSGGYFFDTARDRDPFISFGQHYPLLDMLLTDVPRIYGLDGNTTRLLGLASARTMLPQYDWIVS DEFLTRPEIISHINSLIHSPPGSIWLGMLGRTRSDGIVVGHAVPILRTSQGLVVIQTTSILTPFDLYRQALMPTTDPLQV IYNLEAPDRTLTVLITMQLGDVDHNTFNFIISNRNCTGEGDDRRGTGEYPTSTSVNQCSGEGSRCALPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71328; Mature: 71328
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLIIVLLVSIGVDFSYGVNSALIDIVSRSIPGSIIQKPTDTPQDRAIKIVIHDRGKFC CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEECCCCEE YAPVFSGGESYIRILQCWEQDVSDARYDVFQRISYYIKNTWLCITAPESVVQGRVNWDYV EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHCCCCCEEEE NLRPCTINDPLQRWIVKENAFWTADERYRLKDVGWYAYISKTSSDYYNHTLDSSMNNWVR EEEECCCCCHHHHHEECCCCEECCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHEE TVSTPGNISIKTSIAWHLGSARYFINSRGSKKNTTPIYYNPESGHLAQYNPMSGRLSCMY EECCCCCEEEEEEEEEEECCEEEEEECCCCCCCCCCEEECCCCCCEEEECCCCCCHHHEE SKVGSYQWNWIQWALCSDAPISKDNPAYWNVYLETEEGGMLTDYKGNILRVTRYGPNWGV HHHCCCEECEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEEEEEECCCCCE AYAVKPSFLVKDATHSPTSLFVVDKDLLDWIRYTTGNLGKTEQYCPAGYRSVYKRVKRTL EEEECCCEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC PPDFQLSDDWIRRLYEIAVSATPEAAQVVHGMCGVCMLQSFQMLAELQEYHFQGPLQSGG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YFFDTARDRDPFISFGQHYPLLDMLLTDVPRIYGLDGNTTRLLGLASARTMLPQYDWIVS EEEECCCCCCCCHHCCCCCCHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHCCCCCCEEC DEFLTRPEIISHINSLIHSPPGSIWLGMLGRTRSDGIVVGHAVPILRTSQGLVVIQTTSI CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECEEEEECCCCEEEEEECCC LTPFDLYRQALMPTTDPLQVIYNLEAPDRTLTVLITMQLGDVDHNTFNFIISNRNCTGEG CCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCC DDRRGTGEYPTSTSVNQCSGEGSRCALPF CCCCCCCCCCCCCCCHHHCCCCCEECCCC >Mature Secondary Structure MIRLIIVLLVSIGVDFSYGVNSALIDIVSRSIPGSIIQKPTDTPQDRAIKIVIHDRGKFC CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEECCCCEE YAPVFSGGESYIRILQCWEQDVSDARYDVFQRISYYIKNTWLCITAPESVVQGRVNWDYV EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHCCCCCEEEE NLRPCTINDPLQRWIVKENAFWTADERYRLKDVGWYAYISKTSSDYYNHTLDSSMNNWVR EEEECCCCCHHHHHEECCCCEECCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHEE TVSTPGNISIKTSIAWHLGSARYFINSRGSKKNTTPIYYNPESGHLAQYNPMSGRLSCMY EECCCCCEEEEEEEEEEECCEEEEEECCCCCCCCCCEEECCCCCCEEEECCCCCCHHHEE SKVGSYQWNWIQWALCSDAPISKDNPAYWNVYLETEEGGMLTDYKGNILRVTRYGPNWGV HHHCCCEECEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEEEEEECCCCCE AYAVKPSFLVKDATHSPTSLFVVDKDLLDWIRYTTGNLGKTEQYCPAGYRSVYKRVKRTL EEEECCCEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC PPDFQLSDDWIRRLYEIAVSATPEAAQVVHGMCGVCMLQSFQMLAELQEYHFQGPLQSGG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YFFDTARDRDPFISFGQHYPLLDMLLTDVPRIYGLDGNTTRLLGLASARTMLPQYDWIVS EEEECCCCCCCCHHCCCCCCHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHCCCCCCEEC DEFLTRPEIISHINSLIHSPPGSIWLGMLGRTRSDGIVVGHAVPILRTSQGLVVIQTTSI CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECEEEEECCCCEEEEEECCC LTPFDLYRQALMPTTDPLQVIYNLEAPDRTLTVLITMQLGDVDHNTFNFIISNRNCTGEG CCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCC DDRRGTGEYPTSTSVNQCSGEGSRCALPF CCCCCCCCCCCCCCCHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA