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The map label for this gene is 116332519

Identifier: 116332519

GI number: 116332519

Start: 94688

End: 95251

Strand: Reverse

Name: 116332519

Synonym: LBJ_4083

Alternate gene names: NA

Gene position: 95251-94688 (Counterclockwise)

Preceding gene: 116332520

Following gene: 116332518

Centisome position: 31.78

GC content: 41.84

Gene sequence:

>564_bases
TTGGTCCCCGGTCTTAAATCGAGATTTATATCGATTTTTATTTTTTTCCTAACTATTACGCTGTTTTCTGCCTGTTCTTT
CAAACAGGAGAAAACAAAGGAACTGGTTTTCATCCGCAAAACCGATCTGAATTCCTTTCAAGAGGGGAATTCTAAATTCA
AGAACGGGGACTATTTGGAAGCGATCGAGTTTTATTCAAGAGATCTGGACGTCAATCCGGACAATCCGGCCTCACTTAAC
AATAGAGGACTTGCCAAAAGCAAATCCGGTAACAAAACAGGAGCGATTTCCGATTACGACCAGGCGATTGAAAAACGAGA
GAATTACTCGATCGCTTTCAACAACCGAGGCTGTGCAAAAATGAAAGTTTCCGATTATCGAGGGGTGATCGAAGATCTTT
CTTTAGCGATCCGTTTGAAACCAACTTATGCGAACGCACTCAATAACCGCGCTGCGGTAAACTGGACAGTGAAAGAACAA
CAAAGCGCTTGCGAAGATTGGAAAAAAGCGGCAAACTTAGGGCATAACGAAGCCGAAAAATCCTTTGTAAAATTCTGCAA
TTGA

Upstream 100 bases:

>100_bases
AAGGGTGGAATTTTAAAACTTTGCACCCATAGTGAATCGGTTTTAAAAAGGTTGATCCGAGAAAAAGGAGGACAATAAAT
CTCTTTCGGAGGTTCTTTGG

Downstream 100 bases:

>100_bases
AAACCTCGGGAATCGCTTGCCGGGGAAAGCGGCGTTAAAACACTAACCGAAGACCTTTCTCCCGAATTTCAGAATGCAAA
CAAAACCATTTACAATTCGT

Product: TPR repeat-containing lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MVPGLKSRFISIFIFFLTITLFSACSFKQEKTKELVFIRKTDLNSFQEGNSKFKNGDYLEAIEFYSRDLDVNPDNPASLN
NRGLAKSKSGNKTGAISDYDQAIEKRENYSIAFNNRGCAKMKVSDYRGVIEDLSLAIRLKPTYANALNNRAAVNWTVKEQ
QSACEDWKKAANLGHNEAEKSFVKFCN

Sequences:

>Translated_187_residues
MVPGLKSRFISIFIFFLTITLFSACSFKQEKTKELVFIRKTDLNSFQEGNSKFKNGDYLEAIEFYSRDLDVNPDNPASLN
NRGLAKSKSGNKTGAISDYDQAIEKRENYSIAFNNRGCAKMKVSDYRGVIEDLSLAIRLKPTYANALNNRAAVNWTVKEQ
QSACEDWKKAANLGHNEAEKSFVKFCN
>Mature_187_residues
MVPGLKSRFISIFIFFLTITLFSACSFKQEKTKELVFIRKTDLNSFQEGNSKFKNGDYLEAIEFYSRDLDVNPDNPASLN
NRGLAKSKSGNKTGAISDYDQAIEKRENYSIAFNNRGCAKMKVSDYRGVIEDLSLAIRLKPTYANALNNRAAVNWTVKEQ
QSACEDWKKAANLGHNEAEKSFVKFCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 21164; Mature: 21164

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPGLKSRFISIFIFFLTITLFSACSFKQEKTKELVFIRKTDLNSFQEGNSKFKNGDYLE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEEEECCCCHHHHCCCCCCCCCHHH
AIEFYSRDLDVNPDNPASLNNRGLAKSKSGNKTGAISDYDQAIEKRENYSIAFNNRGCAK
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEE
MKVSDYRGVIEDLSLAIRLKPTYANALNNRAAVNWTVKEQQSACEDWKKAANLGHNEAEK
EEHHHHHHHHHHCEEEEEECCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHH
SFVKFCN
HHHHHCC
>Mature Secondary Structure
MVPGLKSRFISIFIFFLTITLFSACSFKQEKTKELVFIRKTDLNSFQEGNSKFKNGDYLE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEEEECCCCHHHHCCCCCCCCCHHH
AIEFYSRDLDVNPDNPASLNNRGLAKSKSGNKTGAISDYDQAIEKRENYSIAFNNRGCAK
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEE
MKVSDYRGVIEDLSLAIRLKPTYANALNNRAAVNWTVKEQQSACEDWKKAANLGHNEAEK
EEHHHHHHHHHHCEEEEEECCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHH
SFVKFCN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]