| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332465
Identifier: 116332465
GI number: 116332465
Start: 21298
End: 22404
Strand: Reverse
Name: 116332465
Synonym: LBJ_4019
Alternate gene names: NA
Gene position: 22404-21298 (Counterclockwise)
Preceding gene: 116332470
Following gene: 116332464
Centisome position: 7.47
GC content: 40.92
Gene sequence:
>1107_bases ATGAAAATACAAAAACATATACTCAAGATTTCCTTAATTTTTATCACTCCCCTTTTACAGATCGGTTCGATCTACGCACA GGCCTCCCTCCCAATCCCTGAGGAATCGCCGAAGTCATTTCAGGAAAAAGAAAAACAGGCTGCAATAGAGGAGACATTTT TTAAAAAACTGCTCCAACAGTCCTCCTTTACGATACTCGCGGGACGAAACGGCGGGGATAATATTTTTGAAACCGGCACC AAATACCCGAATCTTTCAGGCCTACGAGGAGGGTCGAGAATCACATACGCAAGGGATTTTAATTATGGCGGACTTGGATT CACTCTTCGCTGGCAAAAATGGGAGGCCGATCTAAACCTAAAAACCACCGGACGTTATGTAAATGCGGGGGAGGGAAAAG ACGAGGATTTTTTCCTAGGCGATCCCACGGTCGAAAGAGGAACCAAAATATCAACCAGAGAACTTTCATATTATGATACT CCTTACACGTTTATCGGATCCCGCAACTTTGCAGACGGGAAAGGCCGACTATCGATGAAACAAAACAGGCAATCTCTCAT TTTGAGAAGATACTTCGGAGACAGTGATTCGGACTTTCGAAAAGAAGGCAAAGGAATGTATCTCACGGGTGGTTTTCAGT ATACGTTTATGAAATATGTTCTCTACGACGTATTTCAATTTTTTGACTCAAACCCTGTTTTTTTGAACAGAATCGGCTTG GGTCTAAGTCTTTCGTATTCGACCTACGAATTTCCGTTAGGTCTCGGTTATCGATACTCAAACAAGGAATGGCTTTTCGA AACCTCATTGTCCGGCATTTTCTGGACGGGGCACTTTCGAGACTTCCATTATCAAAGATCTCTTAACTTTATCGGAGATC TTTCCGGTTTCGGAATCGATTTCAACTTAGGAGTGGGAAGAATTTTCGGTAATTATCTAACGTTTCTAAAACTCAACGAA CACAGACTTTTTGGAGACGGTCATTTTTCGACAAAAGGCGGATTAAATAACAACGACATTCTCTCTCAATATTTAGGTCA TTATAAGAATTATATGAATCTAAAAGAATGGAACGTAGAATTATCCCTAACGGGATTTTTATATTAG
Upstream 100 bases:
>100_bases AGGGTAGGGCGGTTAATCTGTCTTGATTTCTTAGTACTATTCGGGGTGAAACGATTGCACCCCGAAGCCTCGGTCCCAAC TAAAAAACAAAAGTAAGTTC
Downstream 100 bases:
>100_bases AGTTGTCCAAAAAATTAATTTTCTATCGGTTTCTATTTCATAGAAACGGTTGATTGAAGTGGTTTTGTTAATTTGAACTA TGAAATTCTATTAAAGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKIQKHILKISLIFITPLLQIGSIYAQASLPIPEESPKSFQEKEKQAAIEETFFKKLLQQSSFTILAGRNGGDNIFETGT KYPNLSGLRGGSRITYARDFNYGGLGFTLRWQKWEADLNLKTTGRYVNAGEGKDEDFFLGDPTVERGTKISTRELSYYDT PYTFIGSRNFADGKGRLSMKQNRQSLILRRYFGDSDSDFRKEGKGMYLTGGFQYTFMKYVLYDVFQFFDSNPVFLNRIGL GLSLSYSTYEFPLGLGYRYSNKEWLFETSLSGIFWTGHFRDFHYQRSLNFIGDLSGFGIDFNLGVGRIFGNYLTFLKLNE HRLFGDGHFSTKGGLNNNDILSQYLGHYKNYMNLKEWNVELSLTGFLY
Sequences:
>Translated_368_residues MKIQKHILKISLIFITPLLQIGSIYAQASLPIPEESPKSFQEKEKQAAIEETFFKKLLQQSSFTILAGRNGGDNIFETGT KYPNLSGLRGGSRITYARDFNYGGLGFTLRWQKWEADLNLKTTGRYVNAGEGKDEDFFLGDPTVERGTKISTRELSYYDT PYTFIGSRNFADGKGRLSMKQNRQSLILRRYFGDSDSDFRKEGKGMYLTGGFQYTFMKYVLYDVFQFFDSNPVFLNRIGL GLSLSYSTYEFPLGLGYRYSNKEWLFETSLSGIFWTGHFRDFHYQRSLNFIGDLSGFGIDFNLGVGRIFGNYLTFLKLNE HRLFGDGHFSTKGGLNNNDILSQYLGHYKNYMNLKEWNVELSLTGFLY >Mature_368_residues MKIQKHILKISLIFITPLLQIGSIYAQASLPIPEESPKSFQEKEKQAAIEETFFKKLLQQSSFTILAGRNGGDNIFETGT KYPNLSGLRGGSRITYARDFNYGGLGFTLRWQKWEADLNLKTTGRYVNAGEGKDEDFFLGDPTVERGTKISTRELSYYDT PYTFIGSRNFADGKGRLSMKQNRQSLILRRYFGDSDSDFRKEGKGMYLTGGFQYTFMKYVLYDVFQFFDSNPVFLNRIGL GLSLSYSTYEFPLGLGYRYSNKEWLFETSLSGIFWTGHFRDFHYQRSLNFIGDLSGFGIDFNLGVGRIFGNYLTFLKLNE HRLFGDGHFSTKGGLNNNDILSQYLGHYKNYMNLKEWNVELSLTGFLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42333; Mature: 42333
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQKHILKISLIFITPLLQIGSIYAQASLPIPEESPKSFQEKEKQAAIEETFFKKLLQQ CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SSFTILAGRNGGDNIFETGTKYPNLSGLRGGSRITYARDFNYGGLGFTLRWQKWEADLNL CCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCEEE KTTGRYVNAGEGKDEDFFLGDPTVERGTKISTRELSYYDTPYTFIGSRNFADGKGRLSMK EECCCEEECCCCCCCCEEECCCCHHCCCEEEEEEEEEECCCEEEECCCCCCCCCCCEEHH QNRQSLILRRYFGDSDSDFRKEGKGMYLTGGFQYTFMKYVLYDVFQFFDSNPVFLNRIGL HHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECC GLSLSYSTYEFPLGLGYRYSNKEWLFETSLSGIFWTGHFRDFHYQRSLNFIGDLSGFGID CEEEECCEEECCCCCCEEECCCCEEEEECCCEEEEECCCEEEHHHHCCCHHCCCCCCCEE FNLGVGRIFGNYLTFLKLNEHRLFGDGHFSTKGGLNNNDILSQYLGHYKNYMNLKEWNVE EECCHHHHHHCEEEEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEE LSLTGFLY EEEEEEEC >Mature Secondary Structure MKIQKHILKISLIFITPLLQIGSIYAQASLPIPEESPKSFQEKEKQAAIEETFFKKLLQQ CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SSFTILAGRNGGDNIFETGTKYPNLSGLRGGSRITYARDFNYGGLGFTLRWQKWEADLNL CCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCEEE KTTGRYVNAGEGKDEDFFLGDPTVERGTKISTRELSYYDTPYTFIGSRNFADGKGRLSMK EECCCEEECCCCCCCCEEECCCCHHCCCEEEEEEEEEECCCEEEECCCCCCCCCCCEEHH QNRQSLILRRYFGDSDSDFRKEGKGMYLTGGFQYTFMKYVLYDVFQFFDSNPVFLNRIGL HHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECC GLSLSYSTYEFPLGLGYRYSNKEWLFETSLSGIFWTGHFRDFHYQRSLNFIGDLSGFGID CEEEECCEEECCCCCCEEECCCCEEEEECCCEEEEECCCEEEHHHHCCCHHCCCCCCCEE FNLGVGRIFGNYLTFLKLNEHRLFGDGHFSTKGGLNNNDILSQYLGHYKNYMNLKEWNVE EECCHHHHHHCEEEEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEE LSLTGFLY EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA