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The map label for this gene is soj [H]

Identifier: 116332446

GI number: 116332446

Start: 139

End: 891

Strand: Direct

Name: soj [H]

Synonym: LBJ_4000

Alternate gene names: 116332446

Gene position: 139-891 (Clockwise)

Preceding gene: NA

Following gene: 116332447

Centisome position: 0.05

GC content: 36.92

Gene sequence:

>753_bases
ATGATAGTTGTATCCATAGCAAACCAGAAAGGTGGAGAAGGTAAAACTACAACCTCTCTTAATTTATCGATGGGGCTTGC
GAGAAGAGGAAAAAAAACTCTGCTCGTTGATATAGATCCTCAAGCAAATTCAACCGGTATTTTTACAAATCCAGAAGGTA
TTGAGAAATCAATGCATGGAGTTTTTAACTCAAAAATGACTATCCAAGAAATCATGATTGAAACGAGGTTACCTGATCTT
TTTTTGGCCCCTTCTAAAATGAATCTTGCGGAAGTAGAAACACTTTCCGGAAATTCCGTAGATGCGCCTTATATTCTGAG
AGACTCTCTTCAAAGTGTGAGTGGGATCGACTTTTGTATCATCGATTGTCCACCTAGCTTATCTATTTTTACGATTAATG
CACTCGTCGGATCAAATTACGTAATTATTCCACTTCAGGCTGAAAAATTTTCCGTAGATGGAATTGTAGGACTTCAACAA
ACAATCACAAGCATCAAAAAAAGAATCAATCCTAACCTTGAAATTTTAGGAGCCCTAGTTACTCAACTCAAGCCTCAAAC
ACTTTTGACGAAAACTATCGTACCCGTTTTAACAAAATACTTTCGAATTTTCGAAACAAGCATCTCTGATGGAGTTGCAG
TAGGAGAATCCCATCTTGCTAAAAAGTCGGTATTTGAATACAACAAGACGAGTAAACAAGCCCAGGAATATGAAGGGTTT
ATAGAGGAGTTTTTAAATGAGCTCAAAAAGTAA

Upstream 100 bases:

>100_bases
AGGTTTATTCGATCTTTGAAGATAAAATTTCCACGAACCAAATTCTGTATCAATAAGGATTCAATGTCGGATATCCGACA
ATAGAGTAAAGGTAGAATTC

Downstream 100 bases:

>100_bases
ACGACTCGGCTCTCTCGCAGATGTATTCCAAGCCGAAAAGTTGGAGGGGACTATTCGTAAAATTCGGCTCGATAAAATTC
TTCCATCCGAAAACCAGCCC

Product: ParA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIVVSIANQKGGEGKTTTSLNLSMGLARRGKKTLLVDIDPQANSTGIFTNPEGIEKSMHGVFNSKMTIQEIMIETRLPDL
FLAPSKMNLAEVETLSGNSVDAPYILRDSLQSVSGIDFCIIDCPPSLSIFTINALVGSNYVIIPLQAEKFSVDGIVGLQQ
TITSIKKRINPNLEILGALVTQLKPQTLLTKTIVPVLTKYFRIFETSISDGVAVGESHLAKKSVFEYNKTSKQAQEYEGF
IEEFLNELKK

Sequences:

>Translated_250_residues
MIVVSIANQKGGEGKTTTSLNLSMGLARRGKKTLLVDIDPQANSTGIFTNPEGIEKSMHGVFNSKMTIQEIMIETRLPDL
FLAPSKMNLAEVETLSGNSVDAPYILRDSLQSVSGIDFCIIDCPPSLSIFTINALVGSNYVIIPLQAEKFSVDGIVGLQQ
TITSIKKRINPNLEILGALVTQLKPQTLLTKTIVPVLTKYFRIFETSISDGVAVGESHLAKKSVFEYNKTSKQAQEYEGF
IEEFLNELKK
>Mature_250_residues
MIVVSIANQKGGEGKTTTSLNLSMGLARRGKKTLLVDIDPQANSTGIFTNPEGIEKSMHGVFNSKMTIQEIMIETRLPDL
FLAPSKMNLAEVETLSGNSVDAPYILRDSLQSVSGIDFCIIDCPPSLSIFTINALVGSNYVIIPLQAEKFSVDGIVGLQQ
TITSIKKRINPNLEILGALVTQLKPQTLLTKTIVPVLTKYFRIFETSISDGVAVGESHLAKKSVFEYNKTSKQAQEYEGF
IEEFLNELKK

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27401; Mature: 27401

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVSIANQKGGEGKTTTSLNLSMGLARRGKKTLLVDIDPQANSTGIFTNPEGIEKSMHG
CEEEEECCCCCCCCCEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHH
VFNSKMTIQEIMIETRLPDLFLAPSKMNLAEVETLSGNSVDAPYILRDSLQSVSGIDFCI
HHCCCHHHHHHHHHHCCCCEEECCCCCCHHHEEECCCCCCCCCHHHHHHHHHCCCCCEEE
IDCPPSLSIFTINALVGSNYVIIPLQAEKFSVDGIVGLQQTITSIKKRINPNLEILGALV
EECCCCCEEEEEEEECCCCEEEEEEECCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
TQLKPQTLLTKTIVPVLTKYFRIFETSISDGVAVGESHLAKKSVFEYNKTSKQAQEYEGF
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH
IEEFLNELKK
HHHHHHHHCC
>Mature Secondary Structure
MIVVSIANQKGGEGKTTTSLNLSMGLARRGKKTLLVDIDPQANSTGIFTNPEGIEKSMHG
CEEEEECCCCCCCCCEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHH
VFNSKMTIQEIMIETRLPDLFLAPSKMNLAEVETLSGNSVDAPYILRDSLQSVSGIDFCI
HHCCCHHHHHHHHHHCCCCEEECCCCCCHHHEEECCCCCCCCCHHHHHHHHHCCCCCEEE
IDCPPSLSIFTINALVGSNYVIIPLQAEKFSVDGIVGLQQTITSIKKRINPNLEILGALV
EECCCCCEEEEEEEECCCCEEEEEEECCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
TQLKPQTLLTKTIVPVLTKYFRIFETSISDGVAVGESHLAKKSVFEYNKTSKQAQEYEGF
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH
IEEFLNELKK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]