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The map label for this gene is parB [H]

Identifier: 116332447

GI number: 116332447

Start: 875

End: 1720

Strand: Direct

Name: parB [H]

Synonym: LBJ_4001

Alternate gene names: 116332447

Gene position: 875-1720 (Clockwise)

Preceding gene: 116332446

Following gene: 116332448

Centisome position: 0.29

GC content: 35.34

Gene sequence:

>846_bases
ATGAGCTCAAAAAGTAAACGACTCGGCTCTCTCGCAGATGTATTCCAAGCCGAAAAGTTGGAGGGGACTATTCGTAAAAT
TCGGCTCGATAAAATTCTTCCATCCGAAAACCAGCCCAGACAAGATCGAAAAAAAGGAATCGAAGACCTCGCGAGAAGTT
TAGACAAAGACGGACTACTCCAACCAATCATTGTCACAAAACAAAATCCGGAAGATGAGAACTATAAAATTGTAGCCGGA
GAAAGAAGATACCACGCAGCGAAACAATTAGGCTGGGCAGAAATAGAATGTAAAATTTTAGACCGGGACGAAAAAGAAAC
CTTTCGACTTGCAATTATAGAAAATCTTCAAAGAGAAAATTTATCCCCTTATGAAGAAGTGGAAGCCATGTCACACTTAA
AGAATAGCTTCAAATATACAGATCAAGAATTAGGAACTCTCTTTGGAAAAAGTAGAAGTTACATGACGGAGCTTCTTGGA
ATTTCAAATCTAAGCAAAGAAGAACTTAGATCCTGCAAAGAAGCAGGAATTGAAAGTAAAAATTTATTGATCCAAGCAGT
TGCAGCTTCTCGAAAAGGAACCTTCTCTGAGTTTTTAAATTTATTTCAAACGGGTGCACTTAAAACCGTTAAAGATGCAA
AATCTTTTAACCGGGAAGAGGAAAACTTGTCCACACCTAAAATTACAAGTGCGACAAACCCAAAAGTTTCAAATTTAAAT
TCAACGGAATATAAGATCACAAAAAAACAAGGTCTAATTCAAATTAGTTCTGATAATGAAGAACTGTTAGGTAATATTTT
TAAACTAATCAAAAAAGAAATCCGTAAAAAATTCAATTCTATATAA

Upstream 100 bases:

>100_bases
GCAGTAGGAGAATCCCATCTTGCTAAAAAGTCGGTATTTGAATACAACAAGACGAGTAAACAAGCCCAGGAATATGAAGG
GTTTATAGAGGAGTTTTTAA

Downstream 100 bases:

>100_bases
CTTCTTAATGTCGTTTAATAAAATTGTTAAACGACATTAAAAGTACATACAAGTACTTAGCAAAAGAAATTTCCAAAAAC
AAAAGGAAATGAACCCAATG

Product: ParB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDLARSLDKDGLLQPIIVTKQNPEDENYKIVAG
ERRYHAAKQLGWAEIECKILDRDEKETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGKSRSYMTELLG
ISNLSKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLNLFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLN
STEYKITKKQGLIQISSDNEELLGNIFKLIKKEIRKKFNSI

Sequences:

>Translated_281_residues
MSSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDLARSLDKDGLLQPIIVTKQNPEDENYKIVAG
ERRYHAAKQLGWAEIECKILDRDEKETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGKSRSYMTELLG
ISNLSKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLNLFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLN
STEYKITKKQGLIQISSDNEELLGNIFKLIKKEIRKKFNSI
>Mature_280_residues
SSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDLARSLDKDGLLQPIIVTKQNPEDENYKIVAGE
RRYHAAKQLGWAEIECKILDRDEKETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGKSRSYMTELLGI
SNLSKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLNLFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLNS
TEYKITKKQGLIQISSDNEELLGNIFKLIKKEIRKKFNSI

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32003; Mature: 31872

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDLARSLDKDGLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
QPIIVTKQNPEDENYKIVAGERRYHAAKQLGWAEIECKILDRDEKETFRLAIIENLQREN
CCEEEECCCCCCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
LSPYEEVEAMSHLKNSFKYTDQELGTLFGKSRSYMTELLGISNLSKEELRSCKEAGIESK
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
NLLIQAVAASRKGTFSEFLNLFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLN
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC
STEYKITKKQGLIQISSDNEELLGNIFKLIKKEIRKKFNSI
CCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDLARSLDKDGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
QPIIVTKQNPEDENYKIVAGERRYHAAKQLGWAEIECKILDRDEKETFRLAIIENLQREN
CCEEEECCCCCCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
LSPYEEVEAMSHLKNSFKYTDQELGTLFGKSRSYMTELLGISNLSKEELRSCKEAGIESK
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
NLLIQAVAASRKGTFSEFLNLFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLN
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC
STEYKITKKQGLIQISSDNEELLGNIFKLIKKEIRKKFNSI
CCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]