| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329492
Identifier: 116329492
GI number: 116329492
Start: 3527672
End: 3528982
Strand: Direct
Name: 116329492
Synonym: LBL_2965
Alternate gene names: NA
Gene position: 3527672-3528982 (Clockwise)
Preceding gene: 116329491
Following gene: 116329493
Centisome position: 97.6
GC content: 39.82
Gene sequence:
>1311_bases ATGAAAGTAACTCACTCCTGTCTGGAATTCGATTCCATTGACGATCTTATAGATTTTACCAGGGAATTTGAAACCGGGTC CATGATTCGTTTTCTTTCTCCGGTTGAAGATAATTCGGGGAATGTTTTGGTAAAAGAAGAAGTGCAGGTTAAGGAATCCA CACTTTCCCGTTTAAAGGATATCAAAGGACAATATACCCCCAAGTTTGACGTAAAATTGAATAAGGAACTTGTGGAGCAG ATTCAGAATATTCTATCCATAAAAATCGTGGATCAACTCAGAAATACGGATATGAAATTTCTGAAGTTTATGTATGAAAA CGCGGTTTATAATTATAAGGGAATCATTCGAAATTCCTTACTTTCCAAAAAGATAGTTTTGACTCTGTTAAAAGTTTACA AACAAAATGTAAGTTTCTTCAAATACGTCAGTGAATTGGGTCTTTTGACCCTCGGAATTGTGATGATTCCCGATACGATG AAGTTCAGACTTCTTCGAAGATATGCTTTCACTGCGGGAGTTCTCATGGACGTTCCTCGGATCGGAGTGGATCGGTTCAT CAAATTGCCTTTCGATGATAATGAGAAAGTCGGAGTTGCGCATAAGTGCTCGGATATATTACAAAAACTTGATCTTATTG GATTTACGTACGCGGCGATTTCCAATCATATGCCGCTCGGAATGATGGATAATCCAGATAAGCTGATTTCGATTGATAAA GCCGGAGAGAGTGAGAGTATAGACGAAACTTTTTTCGACGATATCGTTTCGAACGACGGTGAAAGCGATAGTAAGGAAGA TCGTTCAAAAGAAGACGCGATTCCGGAAAAATCCTTCGATTTATTTCAAGCATTACTGACCGACGCATTAAAACTAGCCC GTTATATCGCGAACGTCAGTCACAATGCCTCTGATAAAGACTATGTGATGGAGGAACTGGTTTATTACATCGCTTACAAC ACCTCCAAAAAATATTTTGACGAACTTCTTGCAAATCCTTTGGTTTCCACCTTCAAAGAGTTCGAAGTGAACGTTAAGAG ACTGAGAAAGATTGCGGAAGTGGAAATGAAATGTGTTTATCCACCTTCGGCTTGGGCGTACCCCAAACCGAAATCTAGCC AGGTTCTTTGCAAAAACAAGGTTTGGGGCTGTCCAAATATCGTTATGGGTTGGGATATTCATGTAATTACGGCCCAGGAA GCCTTCGGTTGGGTCGGAACTAGTCTTCCTATCGATAACTATCCAAAATGCAAATTGGAAGAGGAATTGGAGGTTATCAT CACAGAGCCGGAAAAACCAAAAAAAAAGTGA
Upstream 100 bases:
>100_bases AAACCGAATCGATGACATTGGAAAGAAGGAAAAGTTTAGAGTCGATGCTTGCAAGTCTTGGTAATCCACATAGGGTTACA CGGAGAGATAGAATTTCAAA
Downstream 100 bases:
>100_bases ACTAATGTAAAGCGTTAGTTTTTTTACAAGAAATCAATTTATTTGTATGATATATTAATTCTAAATCCTTGCAATTTTCC GCGGGGAAACATGTTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKVTHSCLEFDSIDDLIDFTREFETGSMIRFLSPVEDNSGNVLVKEEVQVKESTLSRLKDIKGQYTPKFDVKLNKELVEQ IQNILSIKIVDQLRNTDMKFLKFMYENAVYNYKGIIRNSLLSKKIVLTLLKVYKQNVSFFKYVSELGLLTLGIVMIPDTM KFRLLRRYAFTAGVLMDVPRIGVDRFIKLPFDDNEKVGVAHKCSDILQKLDLIGFTYAAISNHMPLGMMDNPDKLISIDK AGESESIDETFFDDIVSNDGESDSKEDRSKEDAIPEKSFDLFQALLTDALKLARYIANVSHNASDKDYVMEELVYYIAYN TSKKYFDELLANPLVSTFKEFEVNVKRLRKIAEVEMKCVYPPSAWAYPKPKSSQVLCKNKVWGCPNIVMGWDIHVITAQE AFGWVGTSLPIDNYPKCKLEEELEVIITEPEKPKKK
Sequences:
>Translated_436_residues MKVTHSCLEFDSIDDLIDFTREFETGSMIRFLSPVEDNSGNVLVKEEVQVKESTLSRLKDIKGQYTPKFDVKLNKELVEQ IQNILSIKIVDQLRNTDMKFLKFMYENAVYNYKGIIRNSLLSKKIVLTLLKVYKQNVSFFKYVSELGLLTLGIVMIPDTM KFRLLRRYAFTAGVLMDVPRIGVDRFIKLPFDDNEKVGVAHKCSDILQKLDLIGFTYAAISNHMPLGMMDNPDKLISIDK AGESESIDETFFDDIVSNDGESDSKEDRSKEDAIPEKSFDLFQALLTDALKLARYIANVSHNASDKDYVMEELVYYIAYN TSKKYFDELLANPLVSTFKEFEVNVKRLRKIAEVEMKCVYPPSAWAYPKPKSSQVLCKNKVWGCPNIVMGWDIHVITAQE AFGWVGTSLPIDNYPKCKLEEELEVIITEPEKPKKK >Mature_436_residues MKVTHSCLEFDSIDDLIDFTREFETGSMIRFLSPVEDNSGNVLVKEEVQVKESTLSRLKDIKGQYTPKFDVKLNKELVEQ IQNILSIKIVDQLRNTDMKFLKFMYENAVYNYKGIIRNSLLSKKIVLTLLKVYKQNVSFFKYVSELGLLTLGIVMIPDTM KFRLLRRYAFTAGVLMDVPRIGVDRFIKLPFDDNEKVGVAHKCSDILQKLDLIGFTYAAISNHMPLGMMDNPDKLISIDK AGESESIDETFFDDIVSNDGESDSKEDRSKEDAIPEKSFDLFQALLTDALKLARYIANVSHNASDKDYVMEELVYYIAYN TSKKYFDELLANPLVSTFKEFEVNVKRLRKIAEVEMKCVYPPSAWAYPKPKSSQVLCKNKVWGCPNIVMGWDIHVITAQE AFGWVGTSLPIDNYPKCKLEEELEVIITEPEKPKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50004; Mature: 50004
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTHSCLEFDSIDDLIDFTREFETGSMIRFLSPVEDNSGNVLVKEEVQVKESTLSRLKD CCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHH IKGQYTPKFDVKLNKELVEQIQNILSIKIVDQLRNTDMKFLKFMYENAVYNYKGIIRNSL CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LSKKIVLTLLKVYKQNVSFFKYVSELGLLTLGIVMIPDTMKFRLLRRYAFTAGVLMDVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC IGVDRFIKLPFDDNEKVGVAHKCSDILQKLDLIGFTYAAISNHMPLGMMDNPDKLISIDK CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC AGESESIDETFFDDIVSNDGESDSKEDRSKEDAIPEKSFDLFQALLTDALKLARYIANVS CCCCCCHHHHHHHHHHCCCCCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC HNASDKDYVMEELVYYIAYNTSKKYFDELLANPLVSTFKEFEVNVKRLRKIAEVEMKCVY CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PPSAWAYPKPKSSQVLCKNKVWGCPNIVMGWDIHVITAQEAFGWVGTSLPIDNYPKCKLE CCCCCCCCCCCCCCEEECCCCCCCCCEEECCEEEEEEHHHHHCCCCCCCCCCCCCCCCCC EELEVIITEPEKPKKK CCCEEEEECCCCCCCC >Mature Secondary Structure MKVTHSCLEFDSIDDLIDFTREFETGSMIRFLSPVEDNSGNVLVKEEVQVKESTLSRLKD CCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHH IKGQYTPKFDVKLNKELVEQIQNILSIKIVDQLRNTDMKFLKFMYENAVYNYKGIIRNSL CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LSKKIVLTLLKVYKQNVSFFKYVSELGLLTLGIVMIPDTMKFRLLRRYAFTAGVLMDVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC IGVDRFIKLPFDDNEKVGVAHKCSDILQKLDLIGFTYAAISNHMPLGMMDNPDKLISIDK CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC AGESESIDETFFDDIVSNDGESDSKEDRSKEDAIPEKSFDLFQALLTDALKLARYIANVS CCCCCCHHHHHHHHHHCCCCCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC HNASDKDYVMEELVYYIAYNTSKKYFDELLANPLVSTFKEFEVNVKRLRKIAEVEMKCVY CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PPSAWAYPKPKSSQVLCKNKVWGCPNIVMGWDIHVITAQEAFGWVGTSLPIDNYPKCKLE CCCCCCCCCCCCCCEEECCCCCCCCCEEECCEEEEEEHHHHHCCCCCCCCCCCCCCCCCC EELEVIITEPEKPKKK CCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA