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The map label for this gene is prrC [H]

Identifier: 116329326

GI number: 116329326

Start: 3285127

End: 3286332

Strand: Direct

Name: prrC [H]

Synonym: LBL_2773

Alternate gene names: 116329326

Gene position: 3285127-3286332 (Clockwise)

Preceding gene: 116329325

Following gene: 116329327

Centisome position: 90.89

GC content: 36.15

Gene sequence:

>1206_bases
ATGGGTAAGTCATTAAAGGAGATAGCTGAGCAATTAAAGGCAACGGAAAAGAAAATACAGTTGATCTATGCCTTTAATGG
TGTAGGGAAAACACGTCTTTCACGTGAATTTAAAGAGCTATTCGCACCTAAAAACGAGAATGGCGATGACGCAGATCAGC
CTGAGTTGACTCGCTCAAAAATTCTGTATTATAATGCTTTAACTGAAGATTTGTTTTATTGGGATAACGACTTAGAGAAC
GATACTAAACCGAAATTAAAAATTCAGCCTAATTCGTTCACGGATTGGATACTGAAAGATCAAGGGCAAGATCAAAATAT
CATAACTAACTTTCAGCGTTATACTAGTGACAAATTAACACCTCGGTTTAACGAAGCATATACAATCAAAGACAAAGACG
AGCGAGAGATTATCATAAAAGATTTTTCGGAAGTGACTTTTTCGTTTAAGCGAGGCAATAAGGAGCAGTCCGACTACCTT
AAGATTTCTAAAGGGGAAGAGAGCAATTTTATTAGGAGTATTTTCTACACCTTGCTGAAACAAGCGATTGCTACCCTAAA
TATCGTAGAATCTAATCAGCGTGAAACGAACCAATTTGATCGGTTAGAATATGTGTTTATTGATGATCCTGTTAGCTCAC
TGGATGAAAATCATTTGATCGAGCTTGCCGTAGACCTGGCGTACCTCATTAAATCCAATAAATCAGATATTAGATTTATA
ATTACAACGCATAATCCACTCTTTTTTAACGTAGTCTCCAACGAGCTCGATAACGACGATAAAAGCCATAAAAAGAAATC
ATTTCAGAAATATAGGATGGTAAAATATGAAGACGGTACATATAAATTAGAAATCCAACCGAACGATTCGCCATTTTCAT
ATCATCTTTATTTAATGTCAGAACTCGATAAAGCTATCCAAAGCAATCAAATAAGCAAATACCACTTCAACTTTTTAAGA
AACATATTAGAAAAGACATCGACATTCCTCGGTTATGAGAAGTGGGGAGATCTATTGCCGAAAACTAACGACGGTAGTAC
CACCCCATATGAAGCTCGAATTATCAATTTCTCAAGTCATTCCAAACATGCAAGTGAAGAAGTAGCTGAGATTGACGACA
ATGCCAAGCGCGTACTAGGTTATTTGTTAGACCAGATTAAAGTAATGTACCGCTTCCATAAACAGAAACCTAACACAGAA
AATTAA

Upstream 100 bases:

>100_bases
AGCGAAGGTCTGCCTCGTGAAATTAAACTGCGTCAAAAGCAATACGAGTACTATCGTGAATTGCTTTTGAGTTTTCCAAA
ACCAGATGGAACGACATAAT

Downstream 100 bases:

>100_bases
AAGGTGGAGTATGCACGAATATAGGCCCATCGCCGAATCCAATAATTTTATCGTTTTAGATAAATACACCAGAGAGTGGC
AGGTAAGCGAAAGCTACCAA

Product: anticodon nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MGKSLKEIAEQLKATEKKIQLIYAFNGVGKTRLSREFKELFAPKNENGDDADQPELTRSKILYYNALTEDLFYWDNDLEN
DTKPKLKIQPNSFTDWILKDQGQDQNIITNFQRYTSDKLTPRFNEAYTIKDKDEREIIIKDFSEVTFSFKRGNKEQSDYL
KISKGEESNFIRSIFYTLLKQAIATLNIVESNQRETNQFDRLEYVFIDDPVSSLDENHLIELAVDLAYLIKSNKSDIRFI
ITTHNPLFFNVVSNELDNDDKSHKKKSFQKYRMVKYEDGTYKLEIQPNDSPFSYHLYLMSELDKAIQSNQISKYHFNFLR
NILEKTSTFLGYEKWGDLLPKTNDGSTTPYEARIINFSSHSKHASEEVAEIDDNAKRVLGYLLDQIKVMYRFHKQKPNTE
N

Sequences:

>Translated_401_residues
MGKSLKEIAEQLKATEKKIQLIYAFNGVGKTRLSREFKELFAPKNENGDDADQPELTRSKILYYNALTEDLFYWDNDLEN
DTKPKLKIQPNSFTDWILKDQGQDQNIITNFQRYTSDKLTPRFNEAYTIKDKDEREIIIKDFSEVTFSFKRGNKEQSDYL
KISKGEESNFIRSIFYTLLKQAIATLNIVESNQRETNQFDRLEYVFIDDPVSSLDENHLIELAVDLAYLIKSNKSDIRFI
ITTHNPLFFNVVSNELDNDDKSHKKKSFQKYRMVKYEDGTYKLEIQPNDSPFSYHLYLMSELDKAIQSNQISKYHFNFLR
NILEKTSTFLGYEKWGDLLPKTNDGSTTPYEARIINFSSHSKHASEEVAEIDDNAKRVLGYLLDQIKVMYRFHKQKPNTE
N
>Mature_400_residues
GKSLKEIAEQLKATEKKIQLIYAFNGVGKTRLSREFKELFAPKNENGDDADQPELTRSKILYYNALTEDLFYWDNDLEND
TKPKLKIQPNSFTDWILKDQGQDQNIITNFQRYTSDKLTPRFNEAYTIKDKDEREIIIKDFSEVTFSFKRGNKEQSDYLK
ISKGEESNFIRSIFYTLLKQAIATLNIVESNQRETNQFDRLEYVFIDDPVSSLDENHLIELAVDLAYLIKSNKSDIRFII
TTHNPLFFNVVSNELDNDDKSHKKKSFQKYRMVKYEDGTYKLEIQPNDSPFSYHLYLMSELDKAIQSNQISKYHFNFLRN
ILEKTSTFLGYEKWGDLLPKTNDGSTTPYEARIINFSSHSKHASEEVAEIDDNAKRVLGYLLDQIKVMYRFHKQKPNTEN

Specific function: Anticodon nuclease triggers the cleavage ligation of tRNA(Lys). It is activated by T4 stp protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47102; Mature: 46971

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSLKEIAEQLKATEKKIQLIYAFNGVGKTRLSREFKELFAPKNENGDDADQPELTRSK
CCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
ILYYNALTEDLFYWDNDLENDTKPKLKIQPNSFTDWILKDQGQDQNIITNFQRYTSDKLT
EEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCC
PRFNEAYTIKDKDEREIIIKDFSEVTFSFKRGNKEQSDYLKISKGEESNFIRSIFYTLLK
CCCCCEEEECCCCCCEEHEECHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
QAIATLNIVESNQRETNQFDRLEYVFIDDPVSSLDENHLIELAVDLAYLIKSNKSDIRFI
HHHHHHHHHCCCCHHCCHHHCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEE
ITTHNPLFFNVVSNELDNDDKSHKKKSFQKYRMVKYEDGTYKLEIQPNDSPFSYHLYLMS
EEECCCEEEEEHHHHCCCCHHHHHHHHHHHHHEEEEECCEEEEEEECCCCCCEEEEHHHH
ELDKAIQSNQISKYHFNFLRNILEKTSTFLGYEKWGDLLPKTNDGSTTPYEARIINFSSH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEEECCCC
SKHASEEVAEIDDNAKRVLGYLLDQIKVMYRFHKQKPNTEN
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GKSLKEIAEQLKATEKKIQLIYAFNGVGKTRLSREFKELFAPKNENGDDADQPELTRSK
CCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
ILYYNALTEDLFYWDNDLENDTKPKLKIQPNSFTDWILKDQGQDQNIITNFQRYTSDKLT
EEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCC
PRFNEAYTIKDKDEREIIIKDFSEVTFSFKRGNKEQSDYLKISKGEESNFIRSIFYTLLK
CCCCCEEEECCCCCCEEHEECHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
QAIATLNIVESNQRETNQFDRLEYVFIDDPVSSLDENHLIELAVDLAYLIKSNKSDIRFI
HHHHHHHHHCCCCHHCCHHHCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEE
ITTHNPLFFNVVSNELDNDDKSHKKKSFQKYRMVKYEDGTYKLEIQPNDSPFSYHLYLMS
EEECCCEEEEEHHHHCCCCHHHHHHHHHHHHHEEEEECCEEEEEEECCCCCCEEEEHHHH
ELDKAIQSNQISKYHFNFLRNILEKTSTFLGYEKWGDLLPKTNDGSTTPYEARIINFSSH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEEECCCC
SKHASEEVAEIDDNAKRVLGYLLDQIKVMYRFHKQKPNTEN
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1691706 [H]