| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is hsdM [H]
Identifier: 116329325
GI number: 116329325
Start: 3282420
End: 3283961
Strand: Direct
Name: hsdM [H]
Synonym: LBL_2771
Alternate gene names: 116329325
Gene position: 3282420-3283961 (Clockwise)
Preceding gene: 116329324
Following gene: 116329326
Centisome position: 90.81
GC content: 44.29
Gene sequence:
>1542_bases ATGACAAGTGCTCAACAACGCGCCGCGCTTCAACGCCAAATCTGGCAAATCGCCAATGATGTGCGAGGTGCAGTAGACGG ATGGGATTTTAAACAATATGTGCTTGGCACTCTTTTTTACCGTTTCATCAGCGAGAACTTTACCAACTACATGGAAGGCG GTGATAGCAGTATTGATTATGCAAAACTGCCCGATAAGCGGATTACCCGCGAAATCAAGGATGATGCCATTAAGACGAGG GGTTATTTTATCTATCCAAGCCAGCTTTTTGCCAATGTCGTTAGCAAGGCTGACGACAACGAGAGCTTGAATACTGACCT GGCGGCTATATTTAAAGCAATCGAAACCTCTGCGAACGGATTTCCATCCGAGCATGACATCAAAGGATTGTTTGCCGATT TTGATACCACGAGCAATCGCCTCGGCAACACAGTGAAAGACAAAAATAGCCGTCTTGCCGCTGTTCTCAAACGTGTGGCC GAGCTTGATTTTGGCGATTTCGATAGCAGTCATATCGATTTATTTGGCGATGCGTACGAATTTCTCATCTCCAACTATGC AGCCAATGCGGGTAAATCCGGTGGCGAGTTTTTTACACCCCAGCATGTTTCCAAGCTGATTGCTCAGCTGGCTATACATA AGCAGACGCGCATCAATAAAATCTATGACCCTGCCTGCGGTTCCGGCTCCTTACTCTTGCAAGCCAAAAAGCAATTTGAT GATCATATCATTGAAGAAGGTTTTTTCGGTCAGGAAATCAACCATACCACGTACAATCTCGCGCGAATGAATATGTTCTT ACATAATATCAACTACGATAAGTTCGATATCGAGCTTGGAAATACGCTGATCGACCCTAAGCATAATAATGAAAAACCAT TCGACGCGATTGTCTCCAATCCTCCCTACTCGATTAACTGGAAAGGAAGTGATGATCCGACCTTGATCAACGATGAGCGT TTTGCGCCGGCAGGAGTATTAGACCCTAAGTCCAAGGCAGACTTTGCCTTTGTGCTCCATGCGCTTAGTTATTTATCCAG TAAGGGCCGGGCTGCCATTGTCTGCTTCCCCGGTATTTTTTACCGAGGTGGTGCCGAACAGAAAATCCGTCAGTATCTGG TAGATAATAATTTTGTAGAAACTGTGATCTCACTAGCGCCGAACTTATTTTTTGGCACGACCATCGCCGTAAATATTCTG GTTCTTTCCAAACATAAAACCGATACGAACACGCAGTTCATTGATGCAAGCGGACTCTTTAAGAAAGAAACCAATACAAA CATACTCACTGACAAGCATATCGAACAGATCATGCAGACCTTCGATAGCAAGATTGATAAGGAGCATTTTGCTAAATCTG TGAGCATGGAGGCGATTGCCAAAAATGAATACAATCTATCTGTAAGCAGTTATGTAGAAGCCAAAGACAACCGAGAAGTG ATCGATATCCAAAAACTCAATGCCGAACTAAAAACCACTGTCAAAAAAATCGATCAGCTCCGTGCGGACATTGATGCAAT CGTTGCGGAGATTGAAGGGTGA
Upstream 100 bases:
>100_bases TCTTTAAAACCATTAGGTTGTCTCTGAGAAGCCCTCATGCAAACCTAAAGAACAATAATACATATTACAATTTTAAACCT GCTTTCATAGGAATATCAGA
Downstream 100 bases:
>100_bases ATCAGAGCTTTATGGAAAAGCTTTTAGATGGAGCTCAAGTGGAATGGAAGACCCTGGGTGAGGTCGCCAAAATTTTGCGT GGTGCCTCACCGCGCCCCAT
Product: Type I restriction-modification system, methyltransferase subunit
Products: NA
Alternate protein names: M.EcoR124II [H]
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTSAQQRAALQRQIWQIANDVRGAVDGWDFKQYVLGTLFYRFISENFTNYMEGGDSSIDYAKLPDKRITREIKDDAIKTR GYFIYPSQLFANVVSKADDNESLNTDLAAIFKAIETSANGFPSEHDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKRVA ELDFGDFDSSHIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAIHKQTRINKIYDPACGSGSLLLQAKKQFD DHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIELGNTLIDPKHNNEKPFDAIVSNPPYSINWKGSDDPTLINDER FAPAGVLDPKSKADFAFVLHALSYLSSKGRAAIVCFPGIFYRGGAEQKIRQYLVDNNFVETVISLAPNLFFGTTIAVNIL VLSKHKTDTNTQFIDASGLFKKETNTNILTDKHIEQIMQTFDSKIDKEHFAKSVSMEAIAKNEYNLSVSSYVEAKDNREV IDIQKLNAELKTTVKKIDQLRADIDAIVAEIEG
Sequences:
>Translated_513_residues MTSAQQRAALQRQIWQIANDVRGAVDGWDFKQYVLGTLFYRFISENFTNYMEGGDSSIDYAKLPDKRITREIKDDAIKTR GYFIYPSQLFANVVSKADDNESLNTDLAAIFKAIETSANGFPSEHDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKRVA ELDFGDFDSSHIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAIHKQTRINKIYDPACGSGSLLLQAKKQFD DHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIELGNTLIDPKHNNEKPFDAIVSNPPYSINWKGSDDPTLINDER FAPAGVLDPKSKADFAFVLHALSYLSSKGRAAIVCFPGIFYRGGAEQKIRQYLVDNNFVETVISLAPNLFFGTTIAVNIL VLSKHKTDTNTQFIDASGLFKKETNTNILTDKHIEQIMQTFDSKIDKEHFAKSVSMEAIAKNEYNLSVSSYVEAKDNREV IDIQKLNAELKTTVKKIDQLRADIDAIVAEIEG >Mature_512_residues TSAQQRAALQRQIWQIANDVRGAVDGWDFKQYVLGTLFYRFISENFTNYMEGGDSSIDYAKLPDKRITREIKDDAIKTRG YFIYPSQLFANVVSKADDNESLNTDLAAIFKAIETSANGFPSEHDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKRVAE LDFGDFDSSHIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAIHKQTRINKIYDPACGSGSLLLQAKKQFDD HIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIELGNTLIDPKHNNEKPFDAIVSNPPYSINWKGSDDPTLINDERF APAGVLDPKSKADFAFVLHALSYLSSKGRAAIVCFPGIFYRGGAEQKIRQYLVDNNFVETVISLAPNLFFGTTIAVNILV LSKHKTDTNTQFIDASGLFKKETNTNILTDKHIEQIMQTFDSKIDKEHFAKSVSMEAIAKNEYNLSVSSYVEAKDNREVI DIQKLNAELKTTVKKIDQLRADIDAIVAEIEG
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. The EcoR124/3 I enzyme recognizes 5'-GAAN(7)RTCG-3' [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=274, Percent_Identity=28.8321167883212, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 57585; Mature: 57454
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAQQRAALQRQIWQIANDVRGAVDGWDFKQYVLGTLFYRFISENFTNYMEGGDSSIDY CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AKLPDKRITREIKDDAIKTRGYFIYPSQLFANVVSKADDNESLNTDLAAIFKAIETSANG HHCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC FPSEHDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKRVAELDFGDFDSSHIDLFGDAYE CCCCCCCCHHHCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH FLISNYAANAGKSGGEFFTPQHVSKLIAQLAIHKQTRINKIYDPACGSGSLLLQAKKQFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHH DHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIELGNTLIDPKHNNEKPFDAIVSN HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHCC PPYSINWKGSDDPTLINDERFAPAGVLDPKSKADFAFVLHALSYLSSKGRAAIVCFPGIF CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHH YRGGAEQKIRQYLVDNNFVETVISLAPNLFFGTTIAVNILVLSKHKTDTNTQFIDASGLF CCCCHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHHEEEEEEEECCCCCCCCEEEECCCCE KKETNTNILTDKHIEQIMQTFDSKIDKEHFAKSVSMEAIAKNEYNLSVSSYVEAKDNREV ECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCE IDIQKLNAELKTTVKKIDQLRADIDAIVAEIEG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSAQQRAALQRQIWQIANDVRGAVDGWDFKQYVLGTLFYRFISENFTNYMEGGDSSIDY CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AKLPDKRITREIKDDAIKTRGYFIYPSQLFANVVSKADDNESLNTDLAAIFKAIETSANG HHCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC FPSEHDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKRVAELDFGDFDSSHIDLFGDAYE CCCCCCCCHHHCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH FLISNYAANAGKSGGEFFTPQHVSKLIAQLAIHKQTRINKIYDPACGSGSLLLQAKKQFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHH DHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIELGNTLIDPKHNNEKPFDAIVSN HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHCC PPYSINWKGSDDPTLINDERFAPAGVLDPKSKADFAFVLHALSYLSSKGRAAIVCFPGIF CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHH YRGGAEQKIRQYLVDNNFVETVISLAPNLFFGTTIAVNILVLSKHKTDTNTQFIDASGLF CCCCHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHHEEEEEEEECCCCCCCCEEEECCCCE KKETNTNILTDKHIEQIMQTFDSKIDKEHFAKSVSMEAIAKNEYNLSVSSYVEAKDNREV ECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCE IDIQKLNAELKTTVKKIDQLRADIDAIVAEIEG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784505 [H]