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The map label for this gene is mcp4 [H]

Identifier: 116329120

GI number: 116329120

Start: 3010665

End: 3012749

Strand: Direct

Name: mcp4 [H]

Synonym: LBL_2543

Alternate gene names: 116329120

Gene position: 3010665-3012749 (Clockwise)

Preceding gene: 116329118

Following gene: 116329121

Centisome position: 83.3

GC content: 43.07

Gene sequence:

>2085_bases
ATGAGCATTCGATTTCGCATTTCTTTGTATCTTTCGATCGTATTGTTTATCGGTTTTGGAATTCTTGCAACAGTCAACTC
ATACACCGCTTATAAAAAATTAGAACAAGAGGTAGTCAACGGCTCCGAAGTAACTGCGGAACGTTGGACGATGGAAATAA
AAGACTATTTAAATACAGGTATGGGTATAATCCGGGGTTTCCGATTCCCGCTTTTATTCGATTCTCCTCCCAGAAACAAA
GTCATCCTAGCCTTGCAGGAAATACTAAAGGTAAACGAGAGTTATTTCGGCGCCCGAGTAGCCTACGAACCGAACGGTTT
CGACGGGCAAGACTCCCAATTTGAAAATACGCCGGGACATGACGCAAGCGGAAGATTCATTCCTTATCTTCACCGTGGAA
AAACGGATGAAGAAATCGTATTGGAAGCCGCTAAATATTACGATAATCCGGGTCCGGAAGGAGAATGGTATCAAGTACCT
AAAAAAACACTTACTCAATTTGTAACCGACCCGTATTATTACGAACTCGACGGAAAGGTCAAAATTCTTATGATATCTCT
GATCGCTCCGTTCCGTGTAGGAAATCAATTTTACGGCGTAGGCGGTCTTGATTATCGGTTGGAGGAATTGCAAAAACTGA
TCGGCGGTAAAAAACCGTTCCAAGGCCAAGGTTATTTATCCCTGATTTCCCCAAAGGGAATTTATGCTGTGAATGGTTTT
GACGGTAATCTGGTAGGAAAACAAATCCCCGATGCCCAAGAATTGGCGTTCTATCTCAAAGAAAGTCAGGAAGAAACCGG
CAAAAAATTCACCACCGACTCGAACGGATATACGCACTATTTCTTTCCGTTTCATATCGGCAAAGACAAACGTTTTTGGA
CGTTGCAAGTAAGTATTCCCAACTCGATTTATCGAGCCGCGATCATGTCCATTCTTTTTCAAAGTTTCGTTGCCACCATC
CTCATACTGCTCTCCGTTCTTCTTTGTGTAAATTTTATATTCCAAAGATTGATCTCGGCCGGACTTCTCAAAGCCGTCGG
ATTTTCCGAAGAAATCGCAAGCGGAAATTTAGTCGCACAAAGTTCACACGGCAAAAAGGACGAAATCGGAACACTTCTCG
GTTCCATGAATCAAATGCGGGAGAATCTTCTCAAAGTCTTACGAGAAATCAGCGGCTCTGCAAAAATGCTTAGAGATACT
TCCGAGAAGATGGCGGATTCTTCTAGAAATTTCTCCGACGTCGCACAAACACAAGCTTCCGCTGCGGAAGAATCTTCGGC
TGCCGTTGAAGAACTCGCTGCTTCCGCTCAAAATGTCGGCAAGTCAATGGAGAAAGCTGTCCTCAGTATGAAAGAAATCG
ACGGAAACGTCGTCAGACTCAAAGAACAAATCGTCAATATTAACAGAGAAATGCAGGATTTAGTCGAACTCGCCGCTCTA
TCCAAAGAGCAAGGTGTTACCGGGGAAAATGCTATGATAGAATCCACAAGTGCAATGGCTGCTATCGGTGACAGCGCCTC
CAGAATCACAGAAATTCTATCAATCATCACCGAAATCTCCGAAAAAACAAACTTACTCGCACTCAACGCAGCAATCGAAG
CGGCAAGAGCAGGAGAAGCGGGAAAAGGATTTGCAGTCGTCGCCGAAGAAATTGGTAAATTAGCATCGCAGACTTCTTCA
AGCGTTCAAGAAATCGGATCCCTTGTTAATTCAACGAACACCGCTGTTTTAAACGGAAATACTAAAGTCGCAGAAGCATC
TAACGTCCTCAAAAAACTGAGAGAACAAGTCGAAGAATTCGATCGATATGCTAAGAACGTACTCGCATCCGTTAAAACAC
AGGAAGAAAATACGAAAGAAATTTCTCAGAGCGCAAACGAACTGATGACATTTAGTTTACAGATCGAAGAAGCGGTTTTA
GAACAAAAACGCGCCACAGATGAAATCACAAAGACAATTATGAGTATTTCCGACGGAACTCAAGAAATCGCATCGGGCGC
GGACGATCTCACTTCTTTCTCCGGAAATATACATGGACAAGCGCAAAATCTGGGGCAATTAATAGGAAAATTTAAAACGA
ATTGA

Upstream 100 bases:

>100_bases
ATTTTTTTATAAATTAGCAATTTTTTGCTCGAGCTTTTCGTCCCATCCTTCGTTAATCATTTTTAATTACTTAAAAGACA
AGTTGCGGGAGGCGCACGCA

Downstream 100 bases:

>100_bases
AATGAAAATTTATATTATAACGCAATCGAGAAAGGAATAGATCTTTAGCTTCAATTTATAAATTTCATCGTGATTTATAA
TTCTTATCCAAATCGAATTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MSIRFRISLYLSIVLFIGFGILATVNSYTAYKKLEQEVVNGSEVTAERWTMEIKDYLNTGMGIIRGFRFPLLFDSPPRNK
VILALQEILKVNESYFGARVAYEPNGFDGQDSQFENTPGHDASGRFIPYLHRGKTDEEIVLEAAKYYDNPGPEGEWYQVP
KKTLTQFVTDPYYYELDGKVKILMISLIAPFRVGNQFYGVGGLDYRLEELQKLIGGKKPFQGQGYLSLISPKGIYAVNGF
DGNLVGKQIPDAQELAFYLKESQEETGKKFTTDSNGYTHYFFPFHIGKDKRFWTLQVSIPNSIYRAAIMSILFQSFVATI
LILLSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSHGKKDEIGTLLGSMNQMRENLLKVLREISGSAKMLRDT
SEKMADSSRNFSDVAQTQASAAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAAL
SKEQGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKGFAVVAEEIGKLASQTSS
SVQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVL
EQKRATDEITKTIMSISDGTQEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTN

Sequences:

>Translated_694_residues
MSIRFRISLYLSIVLFIGFGILATVNSYTAYKKLEQEVVNGSEVTAERWTMEIKDYLNTGMGIIRGFRFPLLFDSPPRNK
VILALQEILKVNESYFGARVAYEPNGFDGQDSQFENTPGHDASGRFIPYLHRGKTDEEIVLEAAKYYDNPGPEGEWYQVP
KKTLTQFVTDPYYYELDGKVKILMISLIAPFRVGNQFYGVGGLDYRLEELQKLIGGKKPFQGQGYLSLISPKGIYAVNGF
DGNLVGKQIPDAQELAFYLKESQEETGKKFTTDSNGYTHYFFPFHIGKDKRFWTLQVSIPNSIYRAAIMSILFQSFVATI
LILLSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSHGKKDEIGTLLGSMNQMRENLLKVLREISGSAKMLRDT
SEKMADSSRNFSDVAQTQASAAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAAL
SKEQGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKGFAVVAEEIGKLASQTSS
SVQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVL
EQKRATDEITKTIMSISDGTQEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTN
>Mature_693_residues
SIRFRISLYLSIVLFIGFGILATVNSYTAYKKLEQEVVNGSEVTAERWTMEIKDYLNTGMGIIRGFRFPLLFDSPPRNKV
ILALQEILKVNESYFGARVAYEPNGFDGQDSQFENTPGHDASGRFIPYLHRGKTDEEIVLEAAKYYDNPGPEGEWYQVPK
KTLTQFVTDPYYYELDGKVKILMISLIAPFRVGNQFYGVGGLDYRLEELQKLIGGKKPFQGQGYLSLISPKGIYAVNGFD
GNLVGKQIPDAQELAFYLKESQEETGKKFTTDSNGYTHYFFPFHIGKDKRFWTLQVSIPNSIYRAAIMSILFQSFVATIL
ILLSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSHGKKDEIGTLLGSMNQMRENLLKVLREISGSAKMLRDTS
EKMADSSRNFSDVAQTQASAAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAALS
KEQGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKGFAVVAEEIGKLASQTSSS
VQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLE
QKRATDEITKTIMSISDGTQEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTN

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=334, Percent_Identity=29.3413173652695, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=327, Percent_Identity=26.9113149847095, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1788195, Length=260, Percent_Identity=28.8461538461538, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1789453, Length=329, Percent_Identity=26.1398176291793, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1788194, Length=301, Percent_Identity=26.9102990033223, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 76274; Mature: 76142

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRFRISLYLSIVLFIGFGILATVNSYTAYKKLEQEVVNGSEVTAERWTMEIKDYLNTG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MGIIRGFRFPLLFDSPPRNKVILALQEILKVNESYFGARVAYEPNGFDGQDSQFENTPGH
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCHHHCCCEEEECCCCCCCCCCCCCCCCCC
DASGRFIPYLHRGKTDEEIVLEAAKYYDNPGPEGEWYQVPKKTLTQFVTDPYYYELDGKV
CCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCEEEEECCCE
KILMISLIAPFRVGNQFYGVGGLDYRLEELQKLIGGKKPFQGQGYLSLISPKGIYAVNGF
EEEHEEHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECC
DGNLVGKQIPDAQELAFYLKESQEETGKKFTTDSNGYTHYFFPFHIGKDKRFWTLQVSIP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEEEECCCCEEEEEEEECC
NSIYRAAIMSILFQSFVATILILLSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEE
SSHGKKDEIGTLLGSMNQMRENLLKVLREISGSAKMLRDTSEKMADSSRNFSDVAQTQAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKEQGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEA
HHHCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCC
GKGFAVVAEEIGKLASQTSSSVQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
DRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQKRATDEITKTIMSISDGT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTN
HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIRFRISLYLSIVLFIGFGILATVNSYTAYKKLEQEVVNGSEVTAERWTMEIKDYLNTG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MGIIRGFRFPLLFDSPPRNKVILALQEILKVNESYFGARVAYEPNGFDGQDSQFENTPGH
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCHHHCCCEEEECCCCCCCCCCCCCCCCCC
DASGRFIPYLHRGKTDEEIVLEAAKYYDNPGPEGEWYQVPKKTLTQFVTDPYYYELDGKV
CCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCEEEEECCCE
KILMISLIAPFRVGNQFYGVGGLDYRLEELQKLIGGKKPFQGQGYLSLISPKGIYAVNGF
EEEHEEHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECC
DGNLVGKQIPDAQELAFYLKESQEETGKKFTTDSNGYTHYFFPFHIGKDKRFWTLQVSIP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEEEECCCCEEEEEEEECC
NSIYRAAIMSILFQSFVATILILLSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEE
SSHGKKDEIGTLLGSMNQMRENLLKVLREISGSAKMLRDTSEKMADSSRNFSDVAQTQAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKEQGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEA
HHHCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCC
GKGFAVVAEEIGKLASQTSSSVQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
DRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQKRATDEITKTIMSISDGT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTN
HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]