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The map label for this gene is mcp4 [H]

Identifier: 116329121

GI number: 116329121

Start: 3012934

End: 3015009

Strand: Direct

Name: mcp4 [H]

Synonym: LBL_2544

Alternate gene names: 116329121

Gene position: 3012934-3015009 (Clockwise)

Preceding gene: 116329120

Following gene: 116329122

Centisome position: 83.36

GC content: 43.02

Gene sequence:

>2076_bases
ATGAGTATTCGATTTCGTATTTCCCTTTACTTATCCATAGTTCTATTTATCGGATTTAGCATCCTCGCCGCAATTAACTC
AATTACCACTTATAGAAATCTGAAATCGGAAGTGGAAAACAATTCAACGATTACTTCCGAACGTTGGTCCTTGGAAGTGA
AAGACATCCTGGACTCCGCCATGTTCTATGCAAGAGGTTTTCGTTCTCCCCTCATCTTCACTTCCCCGCCAAGAGAAGCC
GTTATTACCTCGATCAAAGAAGTCATAGAAAGAAACCCGAACTTTTTCGCTCTTTGGCTAGTCTATGAGCCGGATCTCTA
CGACGGCAAAGACGCTCAATATCGAAATACTTTCGGACACGATTCTACCGGAAGATTTGTTCCCTACGCATTTCAATCCG
GTGAAAAAGGAAAAGCCCGGATCAGACCCAATGTGGGTTATGAGAACCAAGACGGAACCGGCGATTTCTACCAGGTTCCC
AAAAAAAACAACACTTACTACGTTTCAGAACCCTACCGCTACAAATCCGATAACATAGATACGATGATGATTTCCATCGT
TGCTCCGATCAGCAAAGACGGTTTCTTTAGAGGAGCCTGTGGGATCGATTTAAAAGCGGAAGAATTACAAAAGAAATTCG
GAGAAGTCAAACCGTTTCGCAATCAGGGATATATGACTTTGATTTCTCCAAGCGGACTTTATACGGTAAACGGAAAAGAC
CCTTCCTTGATCGGGAACAAAATTCCCGATGCCCAAGAATTAGAATTCTATCTTAAGAAAAGCCAGGAAGGAAAAAATTT
CACTTATAGTTCCGAAGCACACACACATTATTTCTTTCCGTTTCACGTCGGCAAAGACAAACGTTTTTGGACGTTGCAAG
TAAGTATTCCCGATTCGATCTATACGGACGCAATGTTCAATACGATTTTCTCAAGGGCTTTAACGGCTACCCTCATATTG
GTCTCCGTTCTTCTTTGTGTAAATTTTATATTCCAAAGATTGATCTCGGCCGGACTTCTCAAAGCCGTCGGATTTTCCGA
AGAAATCGCAAGCGGAAATTTAGTCGCACAAAGTTCACACGGCAAAAAGGACGAAATCGGAACACTTCTCGGTTCCATGA
ATCAAATGCGGGAGAGTCTTCTCAAAGTCTTACGAGAAATCAGCGGCTCTGCAAAAATGCTTAGAGATACTTCCGAGAAG
ATGGCGGATTCTTCTAGAAATTTCTCCGACGTCGCACAAACACAAGCTTCCGCTGCGGAAGAATCTTCGGCTGCCGTTGA
AGAACTCGCTGCTTCCGCTCAAAATGTCGGCAAGTCAATGGAGAAAGCTGTCCTCAGTATGAAAGAAATCGACGGAAACG
TCGTCAGACTCAAAGAACAAATCGTCAATATTAACAGAGAAATGCAGGATTTAGTCGAACTCGCCGCTCTATCCAAAGAG
CAAGGTGTTACCGGGGAAAATGCTATGATAGAATCCACAAGTGCAATGGCTGCTATCGGTGACAGCGCCTCCAGAATCAC
AGAAATTCTATCAATCATCACCGAAATCTCCGAAAAAACAAACTTACTCGCACTCAACGCAGCAATCGAAGCGGCAAGAG
CAGGAGAAGCGGGAAAAGGATTTGCAGTCGTCGCCGAAGAAATTGGTAAATTAGCATCGCAGACTTCTTCAAGCGTTCAA
GAAATCGGATCCCTTGTTAATTCAACGAACACCGCTGTTTTAAACGGAAATACTAAAGTCGCAGAAGCATCTAACGTCCT
CAAAAAACTGAGAGAACAAGTCGAAGAATTCGATCGATATGCTAAGAACGTACTCGCATCCGTTAAAACACAGGAAGAAA
ATACGAAAGAAATTTCTCAGAGCGCAAACGAACTGATGACATTTAGTTTACAGATCGAAGAAGCGGTTTTAGAACAAAAA
CGCGCCACAGATGAAATCACAAAGACAATTATGAGTATTTCCGACGGAACTCAAGAAATCGCATCGGGCGCGGACGATCT
CACTTCTTTCTCCGGAAATATACATGGACAAGCGCAAAATCTGGGGCAATTAATAGGAAAATTTAAGACCGACTAA

Upstream 100 bases:

>100_bases
TATCCAAATCGAATTTCAAATATAAATATTTGAATTGATGAATTCCCTTTTTTCGATACGATGACTCTTTTCGATTTGAA
AACAAAAAGGTTGGAGAACC

Downstream 100 bases:

>100_bases
AACTCGGAAAAACGGTTGAACCTACCCAGAATCCTACAGATCAAGGGCATTAGGCCGCAAATGAATTCGAAGCAAACTTA
CGCAAAAAACTTTTTCTTTA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 690

Protein sequence:

>691_residues
MSIRFRISLYLSIVLFIGFSILAAINSITTYRNLKSEVENNSTITSERWSLEVKDILDSAMFYARGFRSPLIFTSPPREA
VITSIKEVIERNPNFFALWLVYEPDLYDGKDAQYRNTFGHDSTGRFVPYAFQSGEKGKARIRPNVGYENQDGTGDFYQVP
KKNNTYYVSEPYRYKSDNIDTMMISIVAPISKDGFFRGACGIDLKAEELQKKFGEVKPFRNQGYMTLISPSGLYTVNGKD
PSLIGNKIPDAQELEFYLKKSQEGKNFTYSSEAHTHYFFPFHVGKDKRFWTLQVSIPDSIYTDAMFNTIFSRALTATLIL
VSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSHGKKDEIGTLLGSMNQMRESLLKVLREISGSAKMLRDTSEK
MADSSRNFSDVAQTQASAAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAALSKE
QGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKGFAVVAEEIGKLASQTSSSVQ
EIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQK
RATDEITKTIMSISDGTQEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTD

Sequences:

>Translated_691_residues
MSIRFRISLYLSIVLFIGFSILAAINSITTYRNLKSEVENNSTITSERWSLEVKDILDSAMFYARGFRSPLIFTSPPREA
VITSIKEVIERNPNFFALWLVYEPDLYDGKDAQYRNTFGHDSTGRFVPYAFQSGEKGKARIRPNVGYENQDGTGDFYQVP
KKNNTYYVSEPYRYKSDNIDTMMISIVAPISKDGFFRGACGIDLKAEELQKKFGEVKPFRNQGYMTLISPSGLYTVNGKD
PSLIGNKIPDAQELEFYLKKSQEGKNFTYSSEAHTHYFFPFHVGKDKRFWTLQVSIPDSIYTDAMFNTIFSRALTATLIL
VSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSHGKKDEIGTLLGSMNQMRESLLKVLREISGSAKMLRDTSEK
MADSSRNFSDVAQTQASAAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAALSKE
QGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKGFAVVAEEIGKLASQTSSSVQ
EIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQK
RATDEITKTIMSISDGTQEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTD
>Mature_690_residues
SIRFRISLYLSIVLFIGFSILAAINSITTYRNLKSEVENNSTITSERWSLEVKDILDSAMFYARGFRSPLIFTSPPREAV
ITSIKEVIERNPNFFALWLVYEPDLYDGKDAQYRNTFGHDSTGRFVPYAFQSGEKGKARIRPNVGYENQDGTGDFYQVPK
KNNTYYVSEPYRYKSDNIDTMMISIVAPISKDGFFRGACGIDLKAEELQKKFGEVKPFRNQGYMTLISPSGLYTVNGKDP
SLIGNKIPDAQELEFYLKKSQEGKNFTYSSEAHTHYFFPFHVGKDKRFWTLQVSIPDSIYTDAMFNTIFSRALTATLILV
SVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSHGKKDEIGTLLGSMNQMRESLLKVLREISGSAKMLRDTSEKM
ADSSRNFSDVAQTQASAAEESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAALSKEQ
GVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKGFAVVAEEIGKLASQTSSSVQE
IGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRYAKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQKR
ATDEITKTIMSISDGTQEIASGADDLTSFSGNIHGQAQNLGQLIGKFKTD

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=333, Percent_Identity=29.1291291291291, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788195, Length=260, Percent_Identity=29.2307692307692, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI2367378, Length=313, Percent_Identity=26.1980830670927, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=25.5520504731861, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1788194, Length=301, Percent_Identity=26.9102990033223, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 76132; Mature: 76001

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRFRISLYLSIVLFIGFSILAAINSITTYRNLKSEVENNSTITSERWSLEVKDILDSA
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCHHHHHHHHH
MFYARGFRSPLIFTSPPREAVITSIKEVIERNPNFFALWLVYEPDLYDGKDAQYRNTFGH
HHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
DSTGRFVPYAFQSGEKGKARIRPNVGYENQDGTGDFYQVPKKNNTYYVSEPYRYKSDNID
CCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCEEECCCCEECCCCHH
TMMISIVAPISKDGFFRGACGIDLKAEELQKKFGEVKPFRNQGYMTLISPSGLYTVNGKD
HHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCC
PSLIGNKIPDAQELEFYLKKSQEGKNFTYSSEAHTHYFFPFHVGKDKRFWTLQVSIPDSI
CCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEEECCCCEEEEEEEECCCHH
YTDAMFNTIFSRALTATLILVSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCC
GKKDEIGTLLGSMNQMRESLLKVLREISGSAKMLRDTSEKMADSSRNFSDVAQTQASAAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAALSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKG
CCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCC
FAVVAEEIGKLASQTSSSVQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
AKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQKRATDEITKTIMSISDGTQEI
HHHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ASGADDLTSFSGNIHGQAQNLGQLIGKFKTD
HCCHHHHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIRFRISLYLSIVLFIGFSILAAINSITTYRNLKSEVENNSTITSERWSLEVKDILDSA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCHHHHHHHHH
MFYARGFRSPLIFTSPPREAVITSIKEVIERNPNFFALWLVYEPDLYDGKDAQYRNTFGH
HHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
DSTGRFVPYAFQSGEKGKARIRPNVGYENQDGTGDFYQVPKKNNTYYVSEPYRYKSDNID
CCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCEEECCCCEECCCCHH
TMMISIVAPISKDGFFRGACGIDLKAEELQKKFGEVKPFRNQGYMTLISPSGLYTVNGKD
HHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCC
PSLIGNKIPDAQELEFYLKKSQEGKNFTYSSEAHTHYFFPFHVGKDKRFWTLQVSIPDSI
CCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEEECCCCEEEEEEEECCCHH
YTDAMFNTIFSRALTATLILVSVLLCVNFIFQRLISAGLLKAVGFSEEIASGNLVAQSSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCC
GKKDEIGTLLGSMNQMRESLLKVLREISGSAKMLRDTSEKMADSSRNFSDVAQTQASAAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ESSAAVEELAASAQNVGKSMEKAVLSMKEIDGNVVRLKEQIVNINREMQDLVELAALSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGVTGENAMIESTSAMAAIGDSASRITEILSIITEISEKTNLLALNAAIEAARAGEAGKG
CCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCC
FAVVAEEIGKLASQTSSSVQEIGSLVNSTNTAVLNGNTKVAEASNVLKKLREQVEEFDRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
AKNVLASVKTQEENTKEISQSANELMTFSLQIEEAVLEQKRATDEITKTIMSISDGTQEI
HHHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ASGADDLTSFSGNIHGQAQNLGQLIGKFKTD
HCCHHHHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]