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The map label for this gene is 116328964

Identifier: 116328964

GI number: 116328964

Start: 2805321

End: 2805905

Strand: Direct

Name: 116328964

Synonym: LBL_2365

Alternate gene names: NA

Gene position: 2805321-2805905 (Clockwise)

Preceding gene: 116328963

Following gene: 116328966

Centisome position: 77.61

GC content: 46.67

Gene sequence:

>585_bases
ATGGAAAGATTCAAAATCGCCGCTCTTAAAAAAGGAAAATTCCGGAAGTGGATCGACCGATATCGGATGGAGTTCTTCCT
ATCCGTTTCCTTTCTCCTTCAAATGTTCGTCCTATTTTTTTGGTATACACCTTCCGTCGAGTTCAATCGATTGGATCGGC
TCATAGACGAGGTAGCGTTCGTTGACAATTTAATTATACAAGAACCGAACGTCGGAGAAGCGGCAGACGACGGAGAATTC
GAAGTAACCGATACGATTAAAAAGAAAGAAGATCCTAGAATCGCGGGAGCACAAGACGCGATCATTTCGGGAGCGACAAC
TCCCGTGGATCTGACACCGAATGTGGTTCCCGACTACCCCTCGGAAGCCAGATCCGCCGGTATCGCTGGAACTTCCACTC
TTGAGTTAATCATTGCCGATAATGGACAAGTATTAAGAGTCCGGTCCGTCGGAAAAACCCTCGGGTTCGGCCTGGAAGAA
GCGGCAATAGACGCCTTCTATAAGAAAAGATATTCCCCTTCCGTTCTTGACGGAAAACCGATCACGGTAAAAGTTCTCAT
TCCGGTTCGCTTTAGCCTTTATTAA

Upstream 100 bases:

>100_bases
CTTACGCCGAACTGGACAACACCTTCGAACTCTTAAAGGAAATCGGAGCATTGAAAGTTTCTCTCGTCACAAAGACGACA
CAAGGCGGGGGCTTTGATTG

Downstream 100 bases:

>100_bases
TATATTCAAGTTTAAATCAACGTGAATTCTATATAAGAAAGCCTGGGCGAATATCAGCCTTTGTAAACACATTGTGTTTT
TTGAATATTATTTTACAAAC

Product: TonB-related protein

Products: NA

Alternate protein names: NB-Related Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MERFKIAALKKGKFRKWIDRYRMEFFLSVSFLLQMFVLFFWYTPSVEFNRLDRLIDEVAFVDNLIIQEPNVGEAADDGEF
EVTDTIKKKEDPRIAGAQDAIISGATTPVDLTPNVVPDYPSEARSAGIAGTSTLELIIADNGQVLRVRSVGKTLGFGLEE
AAIDAFYKKRYSPSVLDGKPITVKVLIPVRFSLY

Sequences:

>Translated_194_residues
MERFKIAALKKGKFRKWIDRYRMEFFLSVSFLLQMFVLFFWYTPSVEFNRLDRLIDEVAFVDNLIIQEPNVGEAADDGEF
EVTDTIKKKEDPRIAGAQDAIISGATTPVDLTPNVVPDYPSEARSAGIAGTSTLELIIADNGQVLRVRSVGKTLGFGLEE
AAIDAFYKKRYSPSVLDGKPITVKVLIPVRFSLY
>Mature_194_residues
MERFKIAALKKGKFRKWIDRYRMEFFLSVSFLLQMFVLFFWYTPSVEFNRLDRLIDEVAFVDNLIIQEPNVGEAADDGEF
EVTDTIKKKEDPRIAGAQDAIISGATTPVDLTPNVVPDYPSEARSAGIAGTSTLELIIADNGQVLRVRSVGKTLGFGLEE
AAIDAFYKKRYSPSVLDGKPITVKVLIPVRFSLY

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21805; Mature: 21805

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFKIAALKKGKFRKWIDRYRMEFFLSVSFLLQMFVLFFWYTPSVEFNRLDRLIDEVAF
CCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VDNLIIQEPNVGEAADDGEFEVTDTIKKKEDPRIAGAQDAIISGATTPVDLTPNVVPDYP
HHHHHCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
SEARSAGIAGTSTLELIIADNGQVLRVRSVGKTLGFGLEEAAIDAFYKKRYSPSVLDGKP
CHHHHCCCCCCCEEEEEEECCCCEEEEECHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
ITVKVLIPVRFSLY
EEEEEEEEEEEECC
>Mature Secondary Structure
MERFKIAALKKGKFRKWIDRYRMEFFLSVSFLLQMFVLFFWYTPSVEFNRLDRLIDEVAF
CCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VDNLIIQEPNVGEAADDGEFEVTDTIKKKEDPRIAGAQDAIISGATTPVDLTPNVVPDYP
HHHHHCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
SEARSAGIAGTSTLELIIADNGQVLRVRSVGKTLGFGLEEAAIDAFYKKRYSPSVLDGKP
CHHHHCCCCCCCEEEEEEECCCCEEEEECHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
ITVKVLIPVRFSLY
EEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA