| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328866
Identifier: 116328866
GI number: 116328866
Start: 2652431
End: 2652946
Strand: Reverse
Name: 116328866
Synonym: LBL_2250
Alternate gene names: NA
Gene position: 2652946-2652431 (Counterclockwise)
Preceding gene: 116328867
Following gene: 116328864
Centisome position: 73.4
GC content: 33.72
Gene sequence:
>516_bases ATGGCAAATACAAAAAATCAAAATCATTCTCAACATACCCGCTGGCTAATCAATACATATAAGGTAAAATCATCTTATGA GGAACCTAATTTACGATTAAAGAGAGTCGCACCTTCTGATTTATGGATTCCGAAGCAACAAGTCTCGAACTTAACAAAAC GAATTTCTAAATTCGGGTGCTTGAAAACTGTTCTACATTTTCTTTTGAAGAGGAATCGAAATCGATTACATTCTATTTTT GCTTATTCTGAGAACGAAAAGACTTTATATCAAAAAACTGAACTTGAACTGGTGCGCTTTTCCTTTCGACCAGATTCTGC GGATTGGGCGGAACTTAGACTTGCAGCTCGTTATTACGGTGTTTCCATTTGTAATTTTTTCGTTATGCTCCTTGTATTTG ACGAAAATGAAAGTGTGGGAAAGATTTTAGCAACCAAAAAGTTGAGGATTCGGAAATTTTTTTTATTCAACAAATTTTCT CAAAGAGGAAATCTATCTTTTTTTCAATTTCAATAG
Upstream 100 bases:
>100_bases AGCCTATTCTTCGAAAAAGAGAAAGTTCTAAATCTAAAAAAATTAAAATTTTTTCATAAAATCTCGAATGATTACATTTA CTAGGACAACCGTAAGGGGT
Downstream 100 bases:
>100_bases ATTTTAATAATTCTCGAGAGTCCCCAGAAAGGTCAACTGTGTAAAACGGCAATTATACACAGTTGTTCGGAATTTTTCTT TGGACGGTCTTCCGACCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MANTKNQNHSQHTRWLINTYKVKSSYEEPNLRLKRVAPSDLWIPKQQVSNLTKRISKFGCLKTVLHFLLKRNRNRLHSIF AYSENEKTLYQKTELELVRFSFRPDSADWAELRLAARYYGVSICNFFVMLLVFDENESVGKILATKKLRIRKFFLFNKFS QRGNLSFFQFQ
Sequences:
>Translated_171_residues MANTKNQNHSQHTRWLINTYKVKSSYEEPNLRLKRVAPSDLWIPKQQVSNLTKRISKFGCLKTVLHFLLKRNRNRLHSIF AYSENEKTLYQKTELELVRFSFRPDSADWAELRLAARYYGVSICNFFVMLLVFDENESVGKILATKKLRIRKFFLFNKFS QRGNLSFFQFQ >Mature_170_residues ANTKNQNHSQHTRWLINTYKVKSSYEEPNLRLKRVAPSDLWIPKQQVSNLTKRISKFGCLKTVLHFLLKRNRNRLHSIFA YSENEKTLYQKTELELVRFSFRPDSADWAELRLAARYYGVSICNFFVMLLVFDENESVGKILATKKLRIRKFFLFNKFSQ RGNLSFFQFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20423; Mature: 20292
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTKNQNHSQHTRWLINTYKVKSSYEEPNLRLKRVAPSDLWIPKQQVSNLTKRISKFGC CCCCCCCCCCHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH LKTVLHFLLKRNRNRLHSIFAYSENEKTLYQKTELELVRFSFRPDSADWAELRLAARYYG HHHHHHHHHHCCCCHHHHEEEECCCCHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHH VSICNFFVMLLVFDENESVGKILATKKLRIRKFFLFNKFSQRGNLSFFQFQ HHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure ANTKNQNHSQHTRWLINTYKVKSSYEEPNLRLKRVAPSDLWIPKQQVSNLTKRISKFGC CCCCCCCCCHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH LKTVLHFLLKRNRNRLHSIFAYSENEKTLYQKTELELVRFSFRPDSADWAELRLAARYYG HHHHHHHHHHCCCCHHHHEEEECCCCHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHH VSICNFFVMLLVFDENESVGKILATKKLRIRKFFLFNKFSQRGNLSFFQFQ HHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA