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The map label for this gene is 116328867

Identifier: 116328867

GI number: 116328867

Start: 2656196

End: 2656561

Strand: Reverse

Name: 116328867

Synonym: LBL_2253

Alternate gene names: NA

Gene position: 2656561-2656196 (Counterclockwise)

Preceding gene: 116328870

Following gene: 116328866

Centisome position: 73.5

GC content: 38.52

Gene sequence:

>366_bases
ATGGACAAAATCAGAAAGTATGAGGATTTAGAAGTATATCGTAAGTCCTATTTAGTATCTTTGGAGATTCATAAAAAGAC
ATTAGAATTTCCTAAAGAAGAACAATACGGATTAGCAAGTCAGCTTCGAAATTCCTCAAAATCGATCTGCGGAAATATAG
CGGAAGGATTTGGGAAACAATCGCAATCCAAGCAGGAATTTCGTAGATTTCTAAGTATGACGATCGGCTCGGCAGACGAA
ACAAAAGTCTGGCTGAACTACGCAAAGGATTTGGGATATATAACCGAATCCTTATATACCTCTTGGAAAGGGACTTACGT
CGATATAGCCAAGATGCTTTCCGGTTTGTATAAGAGTTGGGAGTGA

Upstream 100 bases:

>100_bases
GCGCCGAAGGCACGGGTGCAGAGGACAGATGACGGAAGACAGAGGACAGTTTGTAGCTAAAGCTGCTTGGCTTTCCTGAC
GGAAAGTGTAAACAGTAGCA

Downstream 100 bases:

>100_bases
ATCCGATTCTACTTTTAAATTCAAAATATTTTGAATGGAAGAGATGAGATGTCCATTACGAAAGCTGCAACTGGTTTTTC
GAATCTGACAGTAATCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: 23S Ribosomal Protein; S23 Ribosomal; 30S Ribosomal Protein S; Small Subunit Ribosomal E

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDKIRKYEDLEVYRKSYLVSLEIHKKTLEFPKEEQYGLASQLRNSSKSICGNIAEGFGKQSQSKQEFRRFLSMTIGSADE
TKVWLNYAKDLGYITESLYTSWKGTYVDIAKMLSGLYKSWE

Sequences:

>Translated_121_residues
MDKIRKYEDLEVYRKSYLVSLEIHKKTLEFPKEEQYGLASQLRNSSKSICGNIAEGFGKQSQSKQEFRRFLSMTIGSADE
TKVWLNYAKDLGYITESLYTSWKGTYVDIAKMLSGLYKSWE
>Mature_121_residues
MDKIRKYEDLEVYRKSYLVSLEIHKKTLEFPKEEQYGLASQLRNSSKSICGNIAEGFGKQSQSKQEFRRFLSMTIGSADE
TKVWLNYAKDLGYITESLYTSWKGTYVDIAKMLSGLYKSWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14103; Mature: 14103

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIRKYEDLEVYRKSYLVSLEIHKKTLEFPKEEQYGLASQLRNSSKSICGNIAEGFGKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SQSKQEFRRFLSMTIGSADETKVWLNYAKDLGYITESLYTSWKGTYVDIAKMLSGLYKSW
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure
MDKIRKYEDLEVYRKSYLVSLEIHKKTLEFPKEEQYGLASQLRNSSKSICGNIAEGFGKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SQSKQEFRRFLSMTIGSADETKVWLNYAKDLGYITESLYTSWKGTYVDIAKMLSGLYKSW
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA