| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328841
Identifier: 116328841
GI number: 116328841
Start: 2614776
End: 2617709
Strand: Direct
Name: 116328841
Synonym: LBL_2221
Alternate gene names: NA
Gene position: 2614776-2617709 (Clockwise)
Preceding gene: 116328840
Following gene: 116328846
Centisome position: 72.34
GC content: 42.54
Gene sequence:
>2934_bases ATGAGACAACTTCTTTCCAGACTCACCGACTCCATTCTCTTAAACCCGATCCACTCCTGCAGTGTACTTATCGTTTTTCT TTTTCTCTCTTTCTGGCAAGCATCCAAACTTACGGTGAACAGCAATAACCTGGATTTGCTTCCGAAAAACAGTCCTTCCG TCGTCAAAACCCAGAAAGTGATCGAGATGATCGGAGGAAACGGATTCTATATTCTCAGCATCAAGTTCAAAGACGAAAAG GGGATGACGGATCATCTAGTCAAAGCCTTTGCCGCAAGAAAAAAAGGGCAGTCCGAAATCGTGGAAAAGGAACTGAAAGA AGCCGAAAAGATTAAACAACAAAACGTAGCCTATTATAAAGAAAGGGAGAATGCGATCAAAAAAGCTTCGGATGTACTCA ACGAAAGACTTCTGAAAGAAAAAAAATTCGTTCAATATATCTCCTACCGCTACAACGTAGCCTTCTTACAAGACAGACTT CCCCTATTTTTAAAAACCGAAGACTTGTTGGAAGTGCGCAAACGGGTCAAAAGAAAAATCGACGAGGAAGTGGAAAGAGC CAATCCGTTTTTTATCAAACTTTCCGACGAGGAATATAACCCGGACTTCAACGACATACTTTCTAAATATCAGAAACTTG CAAAAAGAGATATATTCGACGAATATAATATATCTCCGGACAAAGGGATGTTGATCTTTTTGATCAAACCCTCTGGATCT TTCACCGACATAGAATTCAACATCGCTCTCGACAAAAAAATCAAAGAAATTGCGGCCGAACTCGCTCTCGACAAAAAGGG AATCCAAATCGGCTACACCGGCACCTACAGATTGCATCTGGACGACTATGAGACTCTGATGGCGGCTCTGAAGCCGATCG CAATCACTTCGTTTATCGGGATTGCGGTACTTTTACTTTTCTTTTTTAGAAATCCTCTTTTTATCCTGATTCTTCTCGTT TCTCTTCTTTCCGGAATTTTATTTTCTTTCGGCTTGACTACGATCGTAATCGGTCAACTCAACTCGGTGACCAGTATCAT CGCATCCATTCTAATGGGACTCGGAATCGACTATGGAATTCAATTTTTATATCGTTTTCGGGAAGAATTCACCCGTGATC AGGATACCCTTCGTTCCATCAAGGACACGATCTATCATACCGGGATCGCATCCTTTATCTCGGCTCTGACCACCACTTCC GCCTTTGTCGTACTTGCGTTCTCCGAGTTTCGAGGTTTCAGCGAATTCGGAATCATCGCGACGTATGGAATTCTGATCAT TGCGGTTTCGATGTACGGTGTGACCGCTCTTCAGATCACCCTTCTTTTTCGTTTGTTTCCTTCTCTCAAAAACAAATTTT TACTTTCGGCAAAAGAACAAACCACTTCCCCTCTTCTTTACCGCTTCTATAAAAAACCGGGCCTTTTGACGTTAGTTGTT CTTGTTATCGTTCTGGCGATTTCCTTTTTCAACTTCAATCCCGGAATCCGATTCAACTACAACGGACGAGATCTGATGGT GGACAATCTGGACTCGGTCAATCTCTATGACGAAATCGGAGATAGATTTGATATCAGTTCCGATCCTCAGGTAATCGTCG TGGATACTCTTGAAGAATCGGAAGCCGTTTTCGATTACATGACGCCTGTACCGGAAGAGATCGCAGGTTCCGTGGACCAG GTCGTTTCTCTTTGGAACTTCGTTCCTCCAAAAGGACAGCAAAGGGCAAACTTAAAAATTCTGAAACAACTTCGATCGGA TATGAAATCGGTCAAAGCAGGTTTTCTAAAACCGGAACAGAGGAAATATCTTCCCGTAGTCAAAAAATATCTGAACGTAA AAGAATATTCTCTTTCCGAAGTTCCCATCTATTTCAGTTCCCAGTTTACAGAAGTAAAAGGTTCCAAAGAAAAAGGCCAT CTCGTATTCATCTATCCGAAAGTTGCTCTCTGGCACGGACAAAAACTTCTCAAGTTCTTCGATGCCGTTGGAGAATTACA TTATCCTAAACTATCCAGAAGAGTGTTGAACACTCTGCTTTACGATTCGAACGGACACATAGCCGTCGATCCGATCCGTG ATCAATGGACTCAGGCGGAGGAACGTCTGATCGTAAAAACCCTGAATACGTATTCCGCTCTTCAATTCAAAAATTTAGGT CTTTTAGACGGAACGATCTCTTTTATCTTAAAAACGAGACCGTTTTCTAACTTGGAGCAGGCAAGATCTCACAAATACGT TTCCAACACCGCGGGAAGTTTGATTCTTTTTGCAAATCTCATCAAGATCGTTCAAAAAGAAGGAGTGACTGCATTTCTCG TCACTCTAATTCTCGTAGTCATCGTATTGATTCTCTTTTTCAGGGGAATTGTTCCCGCTTTGATTTCTTTGATTCCGCTC GTTCTCGGGATTTTCGTTACTCTCGGAATCATGGCGGTGTTTAGAGTTCAATTGAACTTTATGAACGTTCTGGTGTTTCC GGTCATTATAGGTTACGGAATTCAGAATGGAATTTATATCTATTATAGATTCAGAGAGGATCACGATGTGATCCGCGCCA TGTCCATGGTCGGCCCTGCGATCATCGCATCCACGTTAACCACACTTGTGAGATGGAGTTCTCTTTTGATCGCGGATCAA AAAGGACTCAAATCGATCGGTATCGTAGCGAGTATCGGAATCGCCTCTTCCTTGATCATAGCCCTCACTCTCGTGCCGGC CATTCTTGAAATCGTCTATCGTTCCAGAAAAGAAGAGGAACAAGAATCAAAACCGGTCGGTTTTGGAGAAGAAGAACCGA ATTCTTCCGACGCAGTCGAACCCCCTCCCTCCAGATTTAAAACGGCTGAAGTTTCTCGAACAACTTCTCCCAAAAAGAAA AGTGCCAAAAAAAAGGCGACCACTTCCAATAAAACAACCGCCAAAAAGAAATAA
Upstream 100 bases:
>100_bases CGAAACCAACCGGGTAAAATCGGTGGATCCTTCCATCAAAAAGAACGGAATCAAACAAACCATCGCTTTGATCAGAAAAG AAGCTAAAAATTAAACATCA
Downstream 100 bases:
>100_bases GGAGTATTTTAGAATGTTACGATATTCTTTACTATTTTTTTGTTTGATCGTCGCGACTACGAATTGTACCGTTAGATACG TAAAAACGGGTCCAATTTGG
Product: export protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 977; Mature: 977
Protein sequence:
>977_residues MRQLLSRLTDSILLNPIHSCSVLIVFLFLSFWQASKLTVNSNNLDLLPKNSPSVVKTQKVIEMIGGNGFYILSIKFKDEK GMTDHLVKAFAARKKGQSEIVEKELKEAEKIKQQNVAYYKERENAIKKASDVLNERLLKEKKFVQYISYRYNVAFLQDRL PLFLKTEDLLEVRKRVKRKIDEEVERANPFFIKLSDEEYNPDFNDILSKYQKLAKRDIFDEYNISPDKGMLIFLIKPSGS FTDIEFNIALDKKIKEIAAELALDKKGIQIGYTGTYRLHLDDYETLMAALKPIAITSFIGIAVLLLFFFRNPLFILILLV SLLSGILFSFGLTTIVIGQLNSVTSIIASILMGLGIDYGIQFLYRFREEFTRDQDTLRSIKDTIYHTGIASFISALTTTS AFVVLAFSEFRGFSEFGIIATYGILIIAVSMYGVTALQITLLFRLFPSLKNKFLLSAKEQTTSPLLYRFYKKPGLLTLVV LVIVLAISFFNFNPGIRFNYNGRDLMVDNLDSVNLYDEIGDRFDISSDPQVIVVDTLEESEAVFDYMTPVPEEIAGSVDQ VVSLWNFVPPKGQQRANLKILKQLRSDMKSVKAGFLKPEQRKYLPVVKKYLNVKEYSLSEVPIYFSSQFTEVKGSKEKGH LVFIYPKVALWHGQKLLKFFDAVGELHYPKLSRRVLNTLLYDSNGHIAVDPIRDQWTQAEERLIVKTLNTYSALQFKNLG LLDGTISFILKTRPFSNLEQARSHKYVSNTAGSLILFANLIKIVQKEGVTAFLVTLILVVIVLILFFRGIVPALISLIPL VLGIFVTLGIMAVFRVQLNFMNVLVFPVIIGYGIQNGIYIYYRFREDHDVIRAMSMVGPAIIASTLTTLVRWSSLLIADQ KGLKSIGIVASIGIASSLIIALTLVPAILEIVYRSRKEEEQESKPVGFGEEEPNSSDAVEPPPSRFKTAEVSRTTSPKKK SAKKKATTSNKTTAKKK
Sequences:
>Translated_977_residues MRQLLSRLTDSILLNPIHSCSVLIVFLFLSFWQASKLTVNSNNLDLLPKNSPSVVKTQKVIEMIGGNGFYILSIKFKDEK GMTDHLVKAFAARKKGQSEIVEKELKEAEKIKQQNVAYYKERENAIKKASDVLNERLLKEKKFVQYISYRYNVAFLQDRL PLFLKTEDLLEVRKRVKRKIDEEVERANPFFIKLSDEEYNPDFNDILSKYQKLAKRDIFDEYNISPDKGMLIFLIKPSGS FTDIEFNIALDKKIKEIAAELALDKKGIQIGYTGTYRLHLDDYETLMAALKPIAITSFIGIAVLLLFFFRNPLFILILLV SLLSGILFSFGLTTIVIGQLNSVTSIIASILMGLGIDYGIQFLYRFREEFTRDQDTLRSIKDTIYHTGIASFISALTTTS AFVVLAFSEFRGFSEFGIIATYGILIIAVSMYGVTALQITLLFRLFPSLKNKFLLSAKEQTTSPLLYRFYKKPGLLTLVV LVIVLAISFFNFNPGIRFNYNGRDLMVDNLDSVNLYDEIGDRFDISSDPQVIVVDTLEESEAVFDYMTPVPEEIAGSVDQ VVSLWNFVPPKGQQRANLKILKQLRSDMKSVKAGFLKPEQRKYLPVVKKYLNVKEYSLSEVPIYFSSQFTEVKGSKEKGH LVFIYPKVALWHGQKLLKFFDAVGELHYPKLSRRVLNTLLYDSNGHIAVDPIRDQWTQAEERLIVKTLNTYSALQFKNLG LLDGTISFILKTRPFSNLEQARSHKYVSNTAGSLILFANLIKIVQKEGVTAFLVTLILVVIVLILFFRGIVPALISLIPL VLGIFVTLGIMAVFRVQLNFMNVLVFPVIIGYGIQNGIYIYYRFREDHDVIRAMSMVGPAIIASTLTTLVRWSSLLIADQ KGLKSIGIVASIGIASSLIIALTLVPAILEIVYRSRKEEEQESKPVGFGEEEPNSSDAVEPPPSRFKTAEVSRTTSPKKK SAKKKATTSNKTTAKKK >Mature_977_residues MRQLLSRLTDSILLNPIHSCSVLIVFLFLSFWQASKLTVNSNNLDLLPKNSPSVVKTQKVIEMIGGNGFYILSIKFKDEK GMTDHLVKAFAARKKGQSEIVEKELKEAEKIKQQNVAYYKERENAIKKASDVLNERLLKEKKFVQYISYRYNVAFLQDRL PLFLKTEDLLEVRKRVKRKIDEEVERANPFFIKLSDEEYNPDFNDILSKYQKLAKRDIFDEYNISPDKGMLIFLIKPSGS FTDIEFNIALDKKIKEIAAELALDKKGIQIGYTGTYRLHLDDYETLMAALKPIAITSFIGIAVLLLFFFRNPLFILILLV SLLSGILFSFGLTTIVIGQLNSVTSIIASILMGLGIDYGIQFLYRFREEFTRDQDTLRSIKDTIYHTGIASFISALTTTS AFVVLAFSEFRGFSEFGIIATYGILIIAVSMYGVTALQITLLFRLFPSLKNKFLLSAKEQTTSPLLYRFYKKPGLLTLVV LVIVLAISFFNFNPGIRFNYNGRDLMVDNLDSVNLYDEIGDRFDISSDPQVIVVDTLEESEAVFDYMTPVPEEIAGSVDQ VVSLWNFVPPKGQQRANLKILKQLRSDMKSVKAGFLKPEQRKYLPVVKKYLNVKEYSLSEVPIYFSSQFTEVKGSKEKGH LVFIYPKVALWHGQKLLKFFDAVGELHYPKLSRRVLNTLLYDSNGHIAVDPIRDQWTQAEERLIVKTLNTYSALQFKNLG LLDGTISFILKTRPFSNLEQARSHKYVSNTAGSLILFANLIKIVQKEGVTAFLVTLILVVIVLILFFRGIVPALISLIPL VLGIFVTLGIMAVFRVQLNFMNVLVFPVIIGYGIQNGIYIYYRFREDHDVIRAMSMVGPAIIASTLTTLVRWSSLLIADQ KGLKSIGIVASIGIASSLIIALTLVPAILEIVYRSRKEEEQESKPVGFGEEEPNSSDAVEPPPSRFKTAEVSRTTSPKKK SAKKKATTSNKTTAKKK
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110501; Mature: 110501
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50156 SSD ; PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLLSRLTDSILLNPIHSCSVLIVFLFLSFWQASKLTVNSNNLDLLPKNSPSVVKTQKV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCCHHHHHHH IEMIGGNGFYILSIKFKDEKGMTDHLVKAFAARKKGQSEIVEKELKEAEKIKQQNVAYYK HHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ERENAIKKASDVLNERLLKEKKFVQYISYRYNVAFLQDRLPLFLKTEDLLEVRKRVKRKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCEEECCHHHHHHHHHHHHHH DEEVERANPFFIKLSDEEYNPDFNDILSKYQKLAKRDIFDEYNISPDKGMLIFLIKPSGS HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC FTDIEFNIALDKKIKEIAAELALDKKGIQIGYTGTYRLHLDDYETLMAALKPIAITSFIG EEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHH IAVLLLFFFRNPLFILILLVSLLSGILFSFGLTTIVIGQLNSVTSIIASILMGLGIDYGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QFLYRFREEFTRDQDTLRSIKDTIYHTGIASFISALTTTSAFVVLAFSEFRGFSEFGIIA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHH TYGILIIAVSMYGVTALQITLLFRLFPSLKNKFLLSAKEQTTSPLLYRFYKKPGLLTLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHCCCHHHHHHHCCCCHHHHHH LVIVLAISFFNFNPGIRFNYNGRDLMVDNLDSVNLYDEIGDRFDISSDPQVIVVDTLEES HHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCH EAVFDYMTPVPEEIAGSVDQVVSLWNFVPPKGQQRANLKILKQLRSDMKSVKAGFLKPEQ HHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH RKYLPVVKKYLNVKEYSLSEVPIYFSSQFTEVKGSKEKGHLVFIYPKVALWHGQKLLKFF HHHHHHHHHHHCCHHCCCCCCCEEECCCHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHH DAVGELHYPKLSRRVLNTLLYDSNGHIAVDPIRDQWTQAEERLIVKTLNTYSALQFKNLG HHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC LLDGTISFILKTRPFSNLEQARSHKYVSNTAGSLILFANLIKIVQKEGVTAFLVTLILVV CHHHHHHHHHCCCCCCCHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH IVLILFFRGIVPALISLIPLVLGIFVTLGIMAVFRVQLNFMNVLVFPVIIGYGIQNGIYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE YYRFREDHDVIRAMSMVGPAIIASTLTTLVRWSSLLIADQKGLKSIGIVASIGIASSLII EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALTLVPAILEIVYRSRKEEEQESKPVGFGEEEPNSSDAVEPPPSRFKTAEVSRTTSPKKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SAKKKATTSNKTTAKKK HHHHHCCCCCCCCCCCC >Mature Secondary Structure MRQLLSRLTDSILLNPIHSCSVLIVFLFLSFWQASKLTVNSNNLDLLPKNSPSVVKTQKV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCCHHHHHHH IEMIGGNGFYILSIKFKDEKGMTDHLVKAFAARKKGQSEIVEKELKEAEKIKQQNVAYYK HHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ERENAIKKASDVLNERLLKEKKFVQYISYRYNVAFLQDRLPLFLKTEDLLEVRKRVKRKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCEEECCHHHHHHHHHHHHHH DEEVERANPFFIKLSDEEYNPDFNDILSKYQKLAKRDIFDEYNISPDKGMLIFLIKPSGS HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC FTDIEFNIALDKKIKEIAAELALDKKGIQIGYTGTYRLHLDDYETLMAALKPIAITSFIG EEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHH IAVLLLFFFRNPLFILILLVSLLSGILFSFGLTTIVIGQLNSVTSIIASILMGLGIDYGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QFLYRFREEFTRDQDTLRSIKDTIYHTGIASFISALTTTSAFVVLAFSEFRGFSEFGIIA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHH TYGILIIAVSMYGVTALQITLLFRLFPSLKNKFLLSAKEQTTSPLLYRFYKKPGLLTLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHCCCHHHHHHHCCCCHHHHHH LVIVLAISFFNFNPGIRFNYNGRDLMVDNLDSVNLYDEIGDRFDISSDPQVIVVDTLEES HHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCH EAVFDYMTPVPEEIAGSVDQVVSLWNFVPPKGQQRANLKILKQLRSDMKSVKAGFLKPEQ HHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH RKYLPVVKKYLNVKEYSLSEVPIYFSSQFTEVKGSKEKGHLVFIYPKVALWHGQKLLKFF HHHHHHHHHHHCCHHCCCCCCCEEECCCHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHH DAVGELHYPKLSRRVLNTLLYDSNGHIAVDPIRDQWTQAEERLIVKTLNTYSALQFKNLG HHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC LLDGTISFILKTRPFSNLEQARSHKYVSNTAGSLILFANLIKIVQKEGVTAFLVTLILVV CHHHHHHHHHCCCCCCCHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH IVLILFFRGIVPALISLIPLVLGIFVTLGIMAVFRVQLNFMNVLVFPVIIGYGIQNGIYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE YYRFREDHDVIRAMSMVGPAIIASTLTTLVRWSSLLIADQKGLKSIGIVASIGIASSLII EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALTLVPAILEIVYRSRKEEEQESKPVGFGEEEPNSSDAVEPPPSRFKTAEVSRTTSPKKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SAKKKATTSNKTTAKKK HHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA