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The map label for this gene is 116328838

Identifier: 116328838

GI number: 116328838

Start: 2610319

End: 2610939

Strand: Reverse

Name: 116328838

Synonym: LBL_2217

Alternate gene names: NA

Gene position: 2610939-2610319 (Counterclockwise)

Preceding gene: 116328839

Following gene: 116328836

Centisome position: 72.24

GC content: 45.57

Gene sequence:

>621_bases
ATGACCTCGAAAGAATGTTCCACAGAAAATAAGGAAGTTTCCGGTAAGGAACCGGACCGAGTCGTAAGAAAATTATTCCG
TCAAACATTAGTCGGAATCGCGATTCTCGTTTTAGGAGTTGTGTTCCTCGCGCGAGTTTTCCCCGAACCGGTGCTTGCAA
TTTCCCAAAAATTCATCGAGATTACGGGAGTGTTCGGAGTCGGAATCGGAATCATGTTTGCCGATTCTTTGCATGTGTTT
ATTCCGCCCGACGTATTTTTGATGATTGCGGTCGCCGGAAAACTCGATTCGATTCTTGTCATCGCCTCCGCTTCGATCGG
AAGTTTGATCGGAGGAACCGTCTCTTATCTTACGGGAAGAATTCTTTTGCCTAAGATCCAAGGTGTTGCAAGTTTTGTGA
AAAAACACGAACAGAAACTCGAACACTATCTGCATCGATACGGATTTTGGGCTGTCGTTTTAGCGGCTTTGACTCCGCTT
CCATATTCTTGGGTTTCCTTGGCTGCGGGAACGATGAAGATGCGTTATGCTCTCTTTTTTCAAGGATGTCTTTTCCGGAT
TCCGCGTTTTATCGTATTCTATTATCTGATCCGGTTCGGTTGGGTTGGAGGTGGAATGTGA

Upstream 100 bases:

>100_bases
TCCGATCCGATTCTGGCGGAAATTTTAAACAGACTGAGTTATTGCGAAAATCCTTCCCGTTGTCCGCACGGAAGACCCAC
CCTGGTAAAGTTGAGCAGAG

Downstream 100 bases:

>100_bases
AAGACTTTCATTCTATTCTAAATATCGAAAAATACGCAGAGTTTGTCCCAAAACCTAACAGTGTCATTCGTTAGGTCGTT
GCTTTTCTATTTTAGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTSKECSTENKEVSGKEPDRVVRKLFRQTLVGIAILVLGVVFLARVFPEPVLAISQKFIEITGVFGVGIGIMFADSLHVF
IPPDVFLMIAVAGKLDSILVIASASIGSLIGGTVSYLTGRILLPKIQGVASFVKKHEQKLEHYLHRYGFWAVVLAALTPL
PYSWVSLAAGTMKMRYALFFQGCLFRIPRFIVFYYLIRFGWVGGGM

Sequences:

>Translated_206_residues
MTSKECSTENKEVSGKEPDRVVRKLFRQTLVGIAILVLGVVFLARVFPEPVLAISQKFIEITGVFGVGIGIMFADSLHVF
IPPDVFLMIAVAGKLDSILVIASASIGSLIGGTVSYLTGRILLPKIQGVASFVKKHEQKLEHYLHRYGFWAVVLAALTPL
PYSWVSLAAGTMKMRYALFFQGCLFRIPRFIVFYYLIRFGWVGGGM
>Mature_205_residues
TSKECSTENKEVSGKEPDRVVRKLFRQTLVGIAILVLGVVFLARVFPEPVLAISQKFIEITGVFGVGIGIMFADSLHVFI
PPDVFLMIAVAGKLDSILVIASASIGSLIGGTVSYLTGRILLPKIQGVASFVKKHEQKLEHYLHRYGFWAVVLAALTPLP
YSWVSLAAGTMKMRYALFFQGCLFRIPRFIVFYYLIRFGWVGGGM

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326
- InterPro:   IPR015414 [H]

Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22778; Mature: 22646

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKECSTENKEVSGKEPDRVVRKLFRQTLVGIAILVLGVVFLARVFPEPVLAISQKFIE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ITGVFGVGIGIMFADSLHVFIPPDVFLMIAVAGKLDSILVIASASIGSLIGGTVSYLTGR
HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCHHHEEEEECCHHHHHHHHHHHHHHHH
ILLPKIQGVASFVKKHEQKLEHYLHRYGFWAVVLAALTPLPYSWVSLAAGTMKMRYALFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QGCLFRIPRFIVFYYLIRFGWVGGGM
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSKECSTENKEVSGKEPDRVVRKLFRQTLVGIAILVLGVVFLARVFPEPVLAISQKFIE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ITGVFGVGIGIMFADSLHVFIPPDVFLMIAVAGKLDSILVIASASIGSLIGGTVSYLTGR
HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCHHHEEEEECCHHHHHHHHHHHHHHHH
ILLPKIQGVASFVKKHEQKLEHYLHRYGFWAVVLAALTPLPYSWVSLAAGTMKMRYALFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QGCLFRIPRFIVFYYLIRFGWVGGGM
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]