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The map label for this gene is yajC [H]

Identifier: 116328775

GI number: 116328775

Start: 2523767

End: 2524096

Strand: Reverse

Name: yajC [H]

Synonym: LBL_2150

Alternate gene names: 116328775

Gene position: 2524096-2523767 (Counterclockwise)

Preceding gene: 116328776

Following gene: 116328774

Centisome position: 69.83

GC content: 43.03

Gene sequence:

>330_bases
ATGATTTTTAATTTCAGCATATTACTACCACTGGCGCAGGCCGCCGGAGAAGGGGATAAATCTCCTTTTTCCACTTTACT
TCTGATCCCGATTATGCTCGTGATTATGTATTTCCTGGTCATCCGCCCACAGAGGAACGAAGAAAAAAAACGCAAAGAGA
TGATCGGCGGTTTGAAAAAAGGAGACGAAGTGGTTACTTCCTCCGGAATTCACGGTAAGGTCGTAGAGATCAAAGACAAC
AACGAGGTTGTCGTTCTCAACATCGCAAAAGATACGAACGTATCTTTTGCCGCGAGTACCGTTTTAAAGAAAAAACAAGC
TGACAAATGA

Upstream 100 bases:

>100_bases
GGAAAAACGAGAAAGTATTTCGAAGATTTAATTTCCAAAGAGTAAACGGGAAAAATATTGGTAAGAGTTTGACAAAAAAG
ACCGAACAGGAAAGTAAATC

Downstream 100 bases:

>100_bases
AAAAAGCCGCGGTCTCAATTCTGATTTTTTTATTTCTAGGAAATTTGTCTTTGTTTTCTCAGGATGGGGAAGAAATCGAT
TTTTTAGAAAAAGTTTCAGA

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MIFNFSILLPLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIGGLKKGDEVVTSSGIHGKVVEIKDN
NEVVVLNIAKDTNVSFAASTVLKKKQADK

Sequences:

>Translated_109_residues
MIFNFSILLPLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIGGLKKGDEVVTSSGIHGKVVEIKDN
NEVVVLNIAKDTNVSFAASTVLKKKQADK
>Mature_109_residues
MIFNFSILLPLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIGGLKKGDEVVTSSGIHGKVVEIKDN
NEVVVLNIAKDTNVSFAASTVLKKKQADK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=82, Percent_Identity=30.4878048780488, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12028; Mature: 12028

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNFSILLPLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIGGLKK
CEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
GDEVVTSSGIHGKVVEIKDNNEVVVLNIAKDTNVSFAASTVLKKKQADK
CCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIFNFSILLPLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIGGLKK
CEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
GDEVVTSSGIHGKVVEIKDNNEVVVLNIAKDTNVSFAASTVLKKKQADK
CCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]