| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328694
Identifier: 116328694
GI number: 116328694
Start: 2420321
End: 2421202
Strand: Direct
Name: 116328694
Synonym: LBL_2066
Alternate gene names: NA
Gene position: 2420321-2421202 (Clockwise)
Preceding gene: 116328693
Following gene: 116328698
Centisome position: 66.96
GC content: 39.57
Gene sequence:
>882_bases ATGAATTCGACCTTAAAGTTCTTGAGCGCTTTTCTTCTTCTTGGATCGCTATTTCTTTCGATCGGATGCACCTATTCCGT AGAGAAAAAATACGTATATGCAAAACCATATTATCCAAACCAAAACTATTTCAATGAAGAAAACCCTCAATTTGAAGAAG GAAAACCGTATTGGCTTCTGGACTTTTTAGGAAATATTTTCGGGGTTTTATCCAAACTGATTCTTTGGAACAAAAAAATG AACAACCATCGTTTATCCGAAGAAACGAAAAATTATTTAAGGGATTATATCAATGACAATAATCTTCAAGACGTAAAAGT CCGCTTTAATCAATATGCCCCGATAGACGATCTTGTCCAGCTTTGGAGATCGGATAACGTTCATCCGGTTCTAAAATACA CTTTTGGAATCGTCAATTGGTTGTTCGGAGTTATTATTCCAGGAAGACTTTTTGCAGGGCTCCTTACGGGCGATCACTAC AATCCATATTCAAATACAATCAACCTCTACAGCGACATTCCATCGGTTGTTCTTCACGAGGGTGGACATGCAAAAGACTT CGCACTCAGAAAACACAGATCTTTTTATAGTATCTCCTATGCAGTTCCGATTTTTGGTCCTTTGTATGCCGAGGCGCGCG CTTCGGAAGACGCTTTGGGATATCTAAGACACAAATGCGATCTGAAAAATGAATTGATAGCCTATAGAACGTTATATCCC GCTTATGCGACATACTCGGTGGGACCGATTTTAAGTTCCACAGGTAAATTGATCGGTCTGACGGCTTCGATTCCAGGTCA TATCGTTGGCTATAGGAAAGAGAAAAATATCGAAAAGCAGGAGATTCCCGAGTGCAAACTCGTGGAAGAAATGGCAAAAT AA
Upstream 100 bases:
>100_bases AAAACGGCTTTATTAGAATTTTTTGAAAAGCTAAAAATCACTTTAGAACAATCTTCTAAACCAGTTTCTATCAGAAATCA CTAGGATATCTTTTAAGTCT
Downstream 100 bases:
>100_bases AAACTTCCATTGTACTTCCCGACTTGTGAATACTCCCGATCATGCTTTGATTTTTAGGATTATTCTTTAAATAACGTGGG TTCGGCGTAATCAATAAGAA
Product: lipoprotein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNSTLKFLSAFLLLGSLFLSIGCTYSVEKKYVYAKPYYPNQNYFNEENPQFEEGKPYWLLDFLGNIFGVLSKLILWNKKM NNHRLSEETKNYLRDYINDNNLQDVKVRFNQYAPIDDLVQLWRSDNVHPVLKYTFGIVNWLFGVIIPGRLFAGLLTGDHY NPYSNTINLYSDIPSVVLHEGGHAKDFALRKHRSFYSISYAVPIFGPLYAEARASEDALGYLRHKCDLKNELIAYRTLYP AYATYSVGPILSSTGKLIGLTASIPGHIVGYRKEKNIEKQEIPECKLVEEMAK
Sequences:
>Translated_293_residues MNSTLKFLSAFLLLGSLFLSIGCTYSVEKKYVYAKPYYPNQNYFNEENPQFEEGKPYWLLDFLGNIFGVLSKLILWNKKM NNHRLSEETKNYLRDYINDNNLQDVKVRFNQYAPIDDLVQLWRSDNVHPVLKYTFGIVNWLFGVIIPGRLFAGLLTGDHY NPYSNTINLYSDIPSVVLHEGGHAKDFALRKHRSFYSISYAVPIFGPLYAEARASEDALGYLRHKCDLKNELIAYRTLYP AYATYSVGPILSSTGKLIGLTASIPGHIVGYRKEKNIEKQEIPECKLVEEMAK >Mature_293_residues MNSTLKFLSAFLLLGSLFLSIGCTYSVEKKYVYAKPYYPNQNYFNEENPQFEEGKPYWLLDFLGNIFGVLSKLILWNKKM NNHRLSEETKNYLRDYINDNNLQDVKVRFNQYAPIDDLVQLWRSDNVHPVLKYTFGIVNWLFGVIIPGRLFAGLLTGDHY NPYSNTINLYSDIPSVVLHEGGHAKDFALRKHRSFYSISYAVPIFGPLYAEARASEDALGYLRHKCDLKNELIAYRTLYP AYATYSVGPILSSTGKLIGLTASIPGHIVGYRKEKNIEKQEIPECKLVEEMAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33681; Mature: 33681
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTLKFLSAFLLLGSLFLSIGCTYSVEKKYVYAKPYYPNQNYFNEENPQFEEGKPYWLL CCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHH DFLGNIFGVLSKLILWNKKMNNHRLSEETKNYLRDYINDNNLQDVKVRFNQYAPIDDLVQ HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH LWRSDNVHPVLKYTFGIVNWLFGVIIPGRLFAGLLTGDHYNPYSNTINLYSDIPSVVLHE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCHHHHCC GGHAKDFALRKHRSFYSISYAVPIFGPLYAEARASEDALGYLRHKCDLKNELIAYRTLYP CCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH AYATYSVGPILSSTGKLIGLTASIPGHIVGYRKEKNIEKQEIPECKLVEEMAK HHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCHHHCCHHHHHHHHCC >Mature Secondary Structure MNSTLKFLSAFLLLGSLFLSIGCTYSVEKKYVYAKPYYPNQNYFNEENPQFEEGKPYWLL CCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHH DFLGNIFGVLSKLILWNKKMNNHRLSEETKNYLRDYINDNNLQDVKVRFNQYAPIDDLVQ HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH LWRSDNVHPVLKYTFGIVNWLFGVIIPGRLFAGLLTGDHYNPYSNTINLYSDIPSVVLHE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCHHHHCC GGHAKDFALRKHRSFYSISYAVPIFGPLYAEARASEDALGYLRHKCDLKNELIAYRTLYP CCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH AYATYSVGPILSSTGKLIGLTASIPGHIVGYRKEKNIEKQEIPECKLVEEMAK HHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA