Click here to switch to the map view.

The map label for this gene is rcp1 [H]

Identifier: 116328667

GI number: 116328667

Start: 2376119

End: 2376577

Strand: Reverse

Name: rcp1 [H]

Synonym: LBL_2034

Alternate gene names: 116328667

Gene position: 2376577-2376119 (Counterclockwise)

Preceding gene: 116328668

Following gene: 116328666

Centisome position: 65.75

GC content: 40.96

Gene sequence:

>459_bases
ATGAAAGCCGAAATTAAAAATCAAAGTTCGATTCATATACTCGTTGCGGAAGACGATCCGGACGATCGGCTATTGATGAG
GGACGGTTTTCGGGAGAATAATCTGAACAATCCTCTACATTTTGTGAAGGATGGGGAAGAATTGTTCGATTTTCTTCAAA
ACAGAGGGGAATATTCCGATACTTTAAAGTATCCTAGACCGGGAATCATTTTATTGGATTTGAATATGCCAAAAATGGAT
GGAAGAGAGGTTTTAAAAGCGATCAAGTCCGTTTCAGAGTTCAAGGCAATCCCGGTTATTGTTATCACGACTTCTAGGGA
AGAAGAGGATATGTTGCAAACTTACGATCTGGGTGCAAGTTCTTTCATTCGAAAACCCGTGGAGTTTGATGCGTTTATGG
AAACGATCCGAGCTCTGGGAGAATATTGGTTTGAGATCGTGGAGCTTCCCATTGTTTAG

Upstream 100 bases:

>100_bases
ATAGAATTTCACGGGGGAAGAATTTACGCCGAAAGCGTTTTACAGAAAGGTTCCACCTTTTATGTGGATCTTCCGGGCGC
TCTTACGTCTGTTCAAGAAT

Downstream 100 bases:

>100_bases
TAACGATTCATCGGACGAGGTTTCTGTTTGTTTAATCGAAGACGACGAGGACGATTCGATTCTTTTTAGGGAATATTCGG
ACGAGATTCCGTATCCCAAA

Product: receiver component of a two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKAEIKNQSSIHILVAEDDPDDRLLMRDGFRENNLNNPLHFVKDGEELFDFLQNRGEYSDTLKYPRPGIILLDLNMPKMD
GREVLKAIKSVSEFKAIPVIVITTSREEEDMLQTYDLGASSFIRKPVEFDAFMETIRALGEYWFEIVELPIV

Sequences:

>Translated_152_residues
MKAEIKNQSSIHILVAEDDPDDRLLMRDGFRENNLNNPLHFVKDGEELFDFLQNRGEYSDTLKYPRPGIILLDLNMPKMD
GREVLKAIKSVSEFKAIPVIVITTSREEEDMLQTYDLGASSFIRKPVEFDAFMETIRALGEYWFEIVELPIV
>Mature_152_residues
MKAEIKNQSSIHILVAEDDPDDRLLMRDGFRENNLNNPLHFVKDGEELFDFLQNRGEYSDTLKYPRPGIILLDLNMPKMD
GREVLKAIKSVSEFKAIPVIVITTSREEEDMLQTYDLGASSFIRKPVEFDAFMETIRALGEYWFEIVELPIV

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788191, Length=116, Percent_Identity=30.1724137931034, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.-

Molecular weight: Translated: 17597; Mature: 17597

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEIKNQSSIHILVAEDDPDDRLLMRDGFRENNLNNPLHFVKDGEELFDFLQNRGEYSD
CCCCCCCCCCEEEEEECCCCCCEEHHHCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCH
TLKYPRPGIILLDLNMPKMDGREVLKAIKSVSEFKAIPVIVITTSREEEDMLQTYDLGAS
HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHH
SFIRKPVEFDAFMETIRALGEYWFEIVELPIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAEIKNQSSIHILVAEDDPDDRLLMRDGFRENNLNNPLHFVKDGEELFDFLQNRGEYSD
CCCCCCCCCCEEEEEECCCCCCEEHHHCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCH
TLKYPRPGIILLDLNMPKMDGREVLKAIKSVSEFKAIPVIVITTSREEEDMLQTYDLGAS
HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHH
SFIRKPVEFDAFMETIRALGEYWFEIVELPIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]