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The map label for this gene is sufB-1 [C]

Identifier: 116328652

GI number: 116328652

Start: 2356727

End: 2358142

Strand: Reverse

Name: sufB-1 [C]

Synonym: LBL_2018

Alternate gene names: 116328652

Gene position: 2358142-2356727 (Counterclockwise)

Preceding gene: 116328653

Following gene: 116328648

Centisome position: 65.24

GC content: 43.01

Gene sequence:

>1416_bases
GTGGAACAAGTTCTGGAAAAAGAATCCATTTACGGAAATCGTTATTACCGTCCTGATAATTTCCCGAAAGGCCTTACGCG
CAAAGTCGTAGAGTCTATTTCGCATATCAAAAATGAACCGGATTGGCTCACTGAATTCCGTCTCAAAGCCTTTGAAATCT
ACGAACAAAAACCAATGCCGACTTGGGGATTTTTTCCCAATTTCAACGTAGACATCGATTCTTATACGCATTATATAGGT
TCTAATCAACAGAAGAAAAAATCCTGGGATGAAGTGGATCCGGAGGTTCTTAAATCTTTCGAACGTCTCGGAATTCTGGA
GCACGAACGCAAGTATCTCGCCGGAATCGAAGCGATGAACGATTCCGAAACTGTTTACGCTAATGTTAAAAAAGAATTAA
CCGAGCTCGGAATTCTTTTCTGCGACATAGACACCGCGATCCGTGAATATCCTGACATCGTAAGAAAGTATCTCGGGACG
GTCGTGAGCGTAGGAGATAACAAGTTTTCCGCTTTGAACAGTTGTGTTTTTTCCGGCGGCTCTTTCGCTTTTGTTCCTAA
AGGAGTGAAAACTCCGATGCCTCTTCAAGCATATTTTAAAGTGACGGCGGCTTCTTCGGGTCAGTATGAAAGAACTCTTC
TGATCGCGGACGAAGGCGCGGAGATCGAATACTCCGAAGGTTGTTCTTCCGTTCAGGATAAAGGTACCAATTTTCACACT
GCGGTTGTGGAGCTTATAGCTCATAAAAACGCCAAGATCTTTTATACAACGATCCAAAATTGGAAGAAGAATATGTACAA
CTGGACCGTCAAACGCGGATTATGCCATGAAAGAGGGCATATCACTTGGACTGATGTGAATATCGGTGCGAATACGGTCA
AATATCCGGGAATTGTCCTTCAAGGAGATCATTCCACGGGGGATGTTCTTTCTCTTGCATTTGCGGGAGATGGGCAGATC
CAAGATACCGGGGCGAGAATCATTCATGTCGGTAAAAATACTCGAAGTAATATATTAGCAAAAGGTGTTTCTCTCGACGG
AGGAATCAATTCCTATAGGGGACTTGTTAAATTCACCTCCGGATCGAAGAATTCTTATTCTCACGTGAAATGTGACGGTC
TGATGATGGACGATCGTTCTCAGTCCCACGCATATCCTTATAATGACGTTTCCGGTCAAAACGGAACCTTAAATTATGAG
GCTACCGTTTCCAGAATCGACGAAGATCAACTTTTTTATCTCCAATCCAGAGGTTTGTCGGAAGATGATGCAAAGCTTCT
GATCATCAACGGGTTTTGTGAGGGTGTGACAAAACACTTGAATGTGGAATATTCTGTGGAAATGACACGTTTGATTCGTA
TGATTCTCGAAGACGGCCACGTGATTCAAGAAAACAACAGTTCTGCAGTAAGTTAA

Upstream 100 bases:

>100_bases
GTGAAATCAATGGCTATTCCTGAAATGGATCGTTAGCTGGCTCCTGTTTCTTTGGGGATTTTCCTTTTCCCAAGAGTCTA
ATTTCCGGAGGTAATGGAAA

Downstream 100 bases:

>100_bases
ACTAATATTTCATATCGAGCGCCCATAGGAAGCGAGATTATAGGCTCTTTGCGCAACAAAGATGAACGATTCATAAAGAG
CAAAGATGCTTTCGTTTCCT

Product: ABC-type transport system involved in Fe-S cluster assembly, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MEQVLEKESIYGNRYYRPDNFPKGLTRKVVESISHIKNEPDWLTEFRLKAFEIYEQKPMPTWGFFPNFNVDIDSYTHYIG
SNQQKKKSWDEVDPEVLKSFERLGILEHERKYLAGIEAMNDSETVYANVKKELTELGILFCDIDTAIREYPDIVRKYLGT
VVSVGDNKFSALNSCVFSGGSFAFVPKGVKTPMPLQAYFKVTAASSGQYERTLLIADEGAEIEYSEGCSSVQDKGTNFHT
AVVELIAHKNAKIFYTTIQNWKKNMYNWTVKRGLCHERGHITWTDVNIGANTVKYPGIVLQGDHSTGDVLSLAFAGDGQI
QDTGARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTSGSKNSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNGTLNYE
ATVSRIDEDQLFYLQSRGLSEDDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMILEDGHVIQENNSSAVS

Sequences:

>Translated_471_residues
MEQVLEKESIYGNRYYRPDNFPKGLTRKVVESISHIKNEPDWLTEFRLKAFEIYEQKPMPTWGFFPNFNVDIDSYTHYIG
SNQQKKKSWDEVDPEVLKSFERLGILEHERKYLAGIEAMNDSETVYANVKKELTELGILFCDIDTAIREYPDIVRKYLGT
VVSVGDNKFSALNSCVFSGGSFAFVPKGVKTPMPLQAYFKVTAASSGQYERTLLIADEGAEIEYSEGCSSVQDKGTNFHT
AVVELIAHKNAKIFYTTIQNWKKNMYNWTVKRGLCHERGHITWTDVNIGANTVKYPGIVLQGDHSTGDVLSLAFAGDGQI
QDTGARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTSGSKNSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNGTLNYE
ATVSRIDEDQLFYLQSRGLSEDDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMILEDGHVIQENNSSAVS
>Mature_471_residues
MEQVLEKESIYGNRYYRPDNFPKGLTRKVVESISHIKNEPDWLTEFRLKAFEIYEQKPMPTWGFFPNFNVDIDSYTHYIG
SNQQKKKSWDEVDPEVLKSFERLGILEHERKYLAGIEAMNDSETVYANVKKELTELGILFCDIDTAIREYPDIVRKYLGT
VVSVGDNKFSALNSCVFSGGSFAFVPKGVKTPMPLQAYFKVTAASSGQYERTLLIADEGAEIEYSEGCSSVQDKGTNFHT
AVVELIAHKNAKIFYTTIQNWKKNMYNWTVKRGLCHERGHITWTDVNIGANTVKYPGIVLQGDHSTGDVLSLAFAGDGQI
QDTGARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTSGSKNSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNGTLNYE
ATVSRIDEDQLFYLQSRGLSEDDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMILEDGHVIQENNSSAVS

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=462, Percent_Identity=40.2597402597403, Blast_Score=353, Evalue=2e-98,
Organism=Escherichia coli, GI1787971, Length=144, Percent_Identity=28.4722222222222, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52978; Mature: 52978

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQVLEKESIYGNRYYRPDNFPKGLTRKVVESISHIKNEPDWLTEFRLKAFEIYEQKPMP
CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
TWGFFPNFNVDIDSYTHYIGSNQQKKKSWDEVDPEVLKSFERLGILEHERKYLAGIEAMN
CCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
DSETVYANVKKELTELGILFCDIDTAIREYPDIVRKYLGTVVSVGDNKFSALNSCVFSGG
CCCEEEHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCC
SFAFVPKGVKTPMPLQAYFKVTAASSGQYERTLLIADEGAEIEYSEGCSSVQDKGTNFHT
CEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEHHCCCCHHHHCCCCHHH
AVVELIAHKNAKIFYTTIQNWKKNMYNWTVKRGLCHERGHITWTDVNIGANTVKYPGIVL
HHHHHHHCCCCEEEEEEHHHHHHHHHEEHHHHCCCCCCCCEEEEEEECCCCEEECCCEEE
QGDHSTGDVLSLAFAGDGQIQDTGARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTS
ECCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCHHHEECCCCCCCCCCCCCEEEEEC
GSKNSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNGTLNYEATVSRIDEDQLFYLQSRGLS
CCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCEEEEECCCCC
EDDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMILEDGHVIQENNSSAVS
CCCCEEEEEECHHHHHHHHCCEEEEHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MEQVLEKESIYGNRYYRPDNFPKGLTRKVVESISHIKNEPDWLTEFRLKAFEIYEQKPMP
CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
TWGFFPNFNVDIDSYTHYIGSNQQKKKSWDEVDPEVLKSFERLGILEHERKYLAGIEAMN
CCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
DSETVYANVKKELTELGILFCDIDTAIREYPDIVRKYLGTVVSVGDNKFSALNSCVFSGG
CCCEEEHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCC
SFAFVPKGVKTPMPLQAYFKVTAASSGQYERTLLIADEGAEIEYSEGCSSVQDKGTNFHT
CEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEHHCCCCHHHHCCCCHHH
AVVELIAHKNAKIFYTTIQNWKKNMYNWTVKRGLCHERGHITWTDVNIGANTVKYPGIVL
HHHHHHHCCCCEEEEEEHHHHHHHHHEEHHHHCCCCCCCCEEEEEEECCCCEEECCCEEE
QGDHSTGDVLSLAFAGDGQIQDTGARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTS
ECCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCHHHEECCCCCCCCCCCCCEEEEEC
GSKNSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNGTLNYEATVSRIDEDQLFYLQSRGLS
CCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCEEEEECCCCC
EDDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMILEDGHVIQENNSSAVS
CCCCEEEEEECHHHHHHHHCCEEEEHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA