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The map label for this gene is atpE [H]

Identifier: 116328618

GI number: 116328618

Start: 2309013

End: 2309315

Strand: Reverse

Name: atpE [H]

Synonym: LBL_1976

Alternate gene names: 116328618

Gene position: 2309315-2309013 (Counterclockwise)

Preceding gene: 116328619

Following gene: 116328617

Centisome position: 63.89

GC content: 48.51

Gene sequence:

>303_bases
ATGGAATTTGGATTAGGATATATTGGTGTAGGAATCGCTGCGGGGGTCGCAATTCTCGGAGCAGCTCTGGGAATCGGAAG
AATCGGCGGTTCTGCTACGGAAGGAATTTCAAGACAGCCGGAAGCGGGTGGTAAAATTCAAACTGCAATGATTATCGCCG
CTGCGTTGATCGAAGGAGCGGCATTATTCGCTCTTGTGATCGCTTTCCAAGCGGCGGGAACTCTGAACGAAGGTCTGAAA
GCAACTGTTGCCAACCAAACAAAGGCTTCCACACCTGTAGTAACTGAAGAAAAAGGAAAGTAA

Upstream 100 bases:

>100_bases
CATATATTTTCGTTTTGCTTACTTCCTTATTCGTAGGACTAAGCATGCATAGGCACTGATTGTAGAGAATATTGAATCAA
CAAGGAGACAATTGAGCAAT

Downstream 100 bases:

>100_bases
AAGTTGATACTCTTAGCTGCTAAGGGATTGAGCCTCTTAGATGTAAATCCGGGTCTAGTCGTCTGGACTCTGATTACCTT
TCTGGTTGTAGTCCTAGTCC

Product: C subunit of the H(+)-transporting two-sector ATPase, F0 sector

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MEFGLGYIGVGIAAGVAILGAALGIGRIGGSATEGISRQPEAGGKIQTAMIIAAALIEGAALFALVIAFQAAGTLNEGLK
ATVANQTKASTPVVTEEKGK

Sequences:

>Translated_100_residues
MEFGLGYIGVGIAAGVAILGAALGIGRIGGSATEGISRQPEAGGKIQTAMIIAAALIEGAALFALVIAFQAAGTLNEGLK
ATVANQTKASTPVVTEEKGK
>Mature_100_residues
MEFGLGYIGVGIAAGVAILGAALGIGRIGGSATEGISRQPEAGGKIQTAMIIAAALIEGAALFALVIAFQAAGTLNEGLK
ATVANQTKASTPVVTEEKGK

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits [H]

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379 [H]

Pfam domain/function: PF00137 ATP-synt_C [H]

EC number: 3.6.3.14

Molecular weight: Translated: 9783; Mature: 9783

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFGLGYIGVGIAAGVAILGAALGIGRIGGSATEGISRQPEAGGKIQTAMIIAAALIEGA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALFALVIAFQAAGTLNEGLKATVANQTKASTPVVTEEKGK
HHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFGLGYIGVGIAAGVAILGAALGIGRIGGSATEGISRQPEAGGKIQTAMIIAAALIEGA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALFALVIAFQAAGTLNEGLKATVANQTKASTPVVTEEKGK
HHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA