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The map label for this gene is atpF

Identifier: 116328617

GI number: 116328617

Start: 2308488

End: 2309009

Strand: Reverse

Name: atpF

Synonym: LBL_1975

Alternate gene names: 116328617

Gene position: 2309009-2308488 (Counterclockwise)

Preceding gene: 116328618

Following gene: 116328616

Centisome position: 63.88

GC content: 45.21

Gene sequence:

>522_bases
TTGATACTCTTAGCTGCTAAGGGATTGAGCCTCTTAGATGTAAATCCGGGTCTAGTCGTCTGGACTCTGATTACCTTTCT
GGTTGTAGTCCTAGTCCTGAAAAAGTTTGCCTGGGATGTGATTCTGAAGGCTCTCGATGAAAGAGCTCAGGCCGTACAGA
ACGACATCGAAAAAGCTTCGGAACTTCGTTTGGAAGCGGAAGCTCTCCTGAAGGATTACGAAGCTAGGTTGAACTCTGCG
AAAGATGAGGCGAACGCGATCGTCGCTGAAGCCAGGTCCGATGCTTTGAAACTGAAGAACAAACTCTTGGAAGAAACCAA
CCAAGAAGTAAAGGCTCAGAAAGATCAAGCAGTGAAAGAGATCGAACTTGCGAAAGGAAAGGCTCTGGAACAACTGCAGA
CTCAGTTCGTAGAAATGACGATTACCATTGCAGGGAAGGTTTTGGAAAAACAATTAAAAGCGGAAGACTACAAGGCTTTT
ATCGAAACCGAGTTGAATAAACTGGGGAAACTGAGCGCATAA

Upstream 100 bases:

>100_bases
CCAAGCGGCGGGAACTCTGAACGAAGGTCTGAAAGCAACTGTTGCCAACCAAACAAAGGCTTCCACACCTGTAGTAACTG
AAGAAAAAGGAAAGTAAAAG

Downstream 100 bases:

>100_bases
ACCGATGAACGATTCCGGTGTTTCAAAGATATACGCGTCCGCACTTTTAGGAGCTGTAAATTCTCCGGAAGAAGTGGAAC
AAGAACTCGGCGATTTGGTT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MILLAAKGLSLLDVNPGLVVWTLITFLVVVLVLKKFAWDVILKALDERAQAVQNDIEKASELRLEAEALLKDYEARLNSA
KDEANAIVAEARSDALKLKNKLLEETNQEVKAQKDQAVKEIELAKGKALEQLQTQFVEMTITIAGKVLEKQLKAEDYKAF
IETELNKLGKLSA

Sequences:

>Translated_173_residues
MILLAAKGLSLLDVNPGLVVWTLITFLVVVLVLKKFAWDVILKALDERAQAVQNDIEKASELRLEAEALLKDYEARLNSA
KDEANAIVAEARSDALKLKNKLLEETNQEVKAQKDQAVKEIELAKGKALEQLQTQFVEMTITIAGKVLEKQLKAEDYKAF
IETELNKLGKLSA
>Mature_173_residues
MILLAAKGLSLLDVNPGLVVWTLITFLVVVLVLKKFAWDVILKALDERAQAVQNDIEKASELRLEAEALLKDYEARLNSA
KDEANAIVAEARSDALKLKNKLLEETNQEVKAQKDQAVKEIELAKGKALEQLQTQFVEMTITIAGKVLEKQLKAEDYKAF
IETELNKLGKLSA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_LEPBJ (Q04S14)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_801064.1
- STRING:   Q04S14
- GeneID:   4410487
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_1756
- HOGENOM:   HBG617328
- OMA:   FILAWFT
- ProtClustDB:   PRK13460
- BioCyc:   LBOR355277:LBJ_1756-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19245; Mature: 19245

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10f56f1c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLAAKGLSLLDVNPGLVVWTLITFLVVVLVLKKFAWDVILKALDERAQAVQNDIEKAS
CEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRLEAEALLKDYEARLNSAKDEANAIVAEARSDALKLKNKLLEETNQEVKAQKDQAVKE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELAKGKALEQLQTQFVEMTITIAGKVLEKQLKAEDYKAFIETELNKLGKLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MILLAAKGLSLLDVNPGLVVWTLITFLVVVLVLKKFAWDVILKALDERAQAVQNDIEKAS
CEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRLEAEALLKDYEARLNSAKDEANAIVAEARSDALKLKNKLLEETNQEVKAQKDQAVKE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELAKGKALEQLQTQFVEMTITIAGKVLEKQLKAEDYKAFIETELNKLGKLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA