| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is prc-1 [H]
Identifier: 116328569
GI number: 116328569
Start: 2245310
End: 2247127
Strand: Direct
Name: prc-1 [H]
Synonym: LBL_1926
Alternate gene names: 116328569
Gene position: 2245310-2247127 (Clockwise)
Preceding gene: 116328567
Following gene: 116328570
Centisome position: 62.12
GC content: 42.68
Gene sequence:
>1818_bases TTGAAAAAAGGATCTGTCACATTTTCGTCGTTACTTTCCATTCTTTTGACCATTTTTATCCTATATTGCGAGCCCACATC CGGCAAGTCTCCGGCCAAGGCGGATTTTACCCTCAAAGATTTTGATAATGTGATTAGTACGGTTTCCCGCTATTACATCG ATAAGAATATCGATAAAAACCGCGCTTATCGCGAAGCCGCAATTTACGCTCTCTTATCGCTTCCTCATTCCATCTATCTC TATCCCGAAAGTTATTTCAAGGAAAGAGAAAAATACGAGGAAAAAGACGAAATTTTTCCCGGAAAAACATTCAAGATCTC AACAGACGATTCCTTTATTCTTTTTGATCCGGATTATACGGAAGTGGAGAAAATCAGGGACCGCAAGTTGAAAGAGGATG CGAATAGGTCCAAAGTCAACGATGAGGAAGTAAAAAAGATCGTTGAAAGGGAAAAAATCCGTAAAAATGTCCTTTCTTCA AAATGGGAACGAACCGGTTTTAGCAAAAAGGACTTTGATCGAGTTCTCGCATTTATAGAAACCAATCTGGACAAATACAA GGATTCTCCTCTAAAAGACCCTTTCGGAGAATCCGAAGAAAAATCCAAAGAACCGTTCACAATGAACGACGTTATGCTCG CTGCGGCAAACGGTTATCTTTCCTCTCTCGATCCTCATAGTAACGTATTCCTAAGATCCGCCTGGGAAGAATCAATGGCC AAAATCCAAGACGGAAGTTTTGAAGGAATCGGAGCCATTCTTTCAGGTGGAGGAAACAGAGAAGTCGTCGTGGAAAATCC ACTCGAAGGAAGGCCCGCAGTGAACGCTGGCATACGTTCCGGAGACGTAATTCTCGCAGTAGACGGAAAATCGATTAAAG GAATTCTTTTAGATAAGGTCGTGGAAAAAATCAAAGGGAAAAAAGGTTCCAAGGTCGCACTTACCATTCAGAGAAAAGGA GTATCGGGAACCTTACATATTGAAGTCGTAAGAGATACGATCGAAATCAAAAATCTGAGCAGTAAACTGATCGAAGGCCA CGAATATATCGGCTATATCAAACTTACCGGTTTTGTGAAGTCGGAAGACGGACCTTCCGTAGACCGAGAATTGATGGATA AATATAAAGAACTCGAAAAAGAAGCTCAGACGAAAGGTACCAGGCTCAAAGCGGTGATCCTCGATCTGAGAAACAACGCG GGCGGTTACTTAGATCTTGCAATCGATATCGCGGATATGTTCATTGAAAAGGGTTTGATCGTTTCCACCAAAAGCCCGAA TCGCAGCCCGGAAGACGCTTATGCCAAGAATAAGGATATCACCAATTTACCGTTAGCCGTTTTGATCAATGCGAAATCCG CTTCTGCTTCCGAAATTGTCGCAAGTGCGATCAAACATCACGGAAGAGGTTTGGTCCTCGGAGAAAGGACTTTCGGAAAA GCTACGGTGCAAAAATTGATGCCTCTCGGAAGCGACTATCTGATTAAACTCACACAAGCTCGTTATTATTCTCCTTCGGG AAACACAATTCAGGTCGTAGGAGTAAAACCGGATATAGAAATTTCTTCCGAAGAAGACGGTTCCTTTCCATTCCGGTTCA GAGAGGAGAACATGTGGAATCATCTTGCCGAACTTCCGCCTGCCGCCGAGGAAAAAAGTTCTTTCGACGTTAAGAGTTTG GAAACTTGGGTTCAAAAGAACGGAAAAGCCTCCGAATTCATCGCGGCTCATAAAAACGATCCCATCAAACCGGACTACCA GCTCATTCGTTCCTTAGATTATATCGAAGCGCTTATTAACACACAAAAAAAGAAATAA
Upstream 100 bases:
>100_bases CAAGAGGACGAAGATAAAACTTACGTCCCAAAGAGATTGACACTTTGAGATTTGAATAGAGAATGAACCGAAAATTTCCT GAAATCCGAGGAACACAAGT
Downstream 100 bases:
>100_bases AATGCCCCGTATCAAAACGGACTTCCTAGTCTTAGGGAGCGGAATCACGGGCCTCTTCGCGGCCTTAAAATTAGCTTCCT ACGGCTCCGTTATCATCATC
Product: periplasmic protease
Products: NA
Alternate protein names: C-terminal-processing protease [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MKKGSVTFSSLLSILLTIFILYCEPTSGKSPAKADFTLKDFDNVISTVSRYYIDKNIDKNRAYREAAIYALLSLPHSIYL YPESYFKEREKYEEKDEIFPGKTFKISTDDSFILFDPDYTEVEKIRDRKLKEDANRSKVNDEEVKKIVEREKIRKNVLSS KWERTGFSKKDFDRVLAFIETNLDKYKDSPLKDPFGESEEKSKEPFTMNDVMLAAANGYLSSLDPHSNVFLRSAWEESMA KIQDGSFEGIGAILSGGGNREVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALTIQRKG VSGTLHIEVVRDTIEIKNLSSKLIEGHEYIGYIKLTGFVKSEDGPSVDRELMDKYKELEKEAQTKGTRLKAVILDLRNNA GGYLDLAIDIADMFIEKGLIVSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGLVLGERTFGK ATVQKLMPLGSDYLIKLTQARYYSPSGNTIQVVGVKPDIEISSEEDGSFPFRFREENMWNHLAELPPAAEEKSSFDVKSL ETWVQKNGKASEFIAAHKNDPIKPDYQLIRSLDYIEALINTQKKK
Sequences:
>Translated_605_residues MKKGSVTFSSLLSILLTIFILYCEPTSGKSPAKADFTLKDFDNVISTVSRYYIDKNIDKNRAYREAAIYALLSLPHSIYL YPESYFKEREKYEEKDEIFPGKTFKISTDDSFILFDPDYTEVEKIRDRKLKEDANRSKVNDEEVKKIVEREKIRKNVLSS KWERTGFSKKDFDRVLAFIETNLDKYKDSPLKDPFGESEEKSKEPFTMNDVMLAAANGYLSSLDPHSNVFLRSAWEESMA KIQDGSFEGIGAILSGGGNREVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALTIQRKG VSGTLHIEVVRDTIEIKNLSSKLIEGHEYIGYIKLTGFVKSEDGPSVDRELMDKYKELEKEAQTKGTRLKAVILDLRNNA GGYLDLAIDIADMFIEKGLIVSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGLVLGERTFGK ATVQKLMPLGSDYLIKLTQARYYSPSGNTIQVVGVKPDIEISSEEDGSFPFRFREENMWNHLAELPPAAEEKSSFDVKSL ETWVQKNGKASEFIAAHKNDPIKPDYQLIRSLDYIEALINTQKKK >Mature_605_residues MKKGSVTFSSLLSILLTIFILYCEPTSGKSPAKADFTLKDFDNVISTVSRYYIDKNIDKNRAYREAAIYALLSLPHSIYL YPESYFKEREKYEEKDEIFPGKTFKISTDDSFILFDPDYTEVEKIRDRKLKEDANRSKVNDEEVKKIVEREKIRKNVLSS KWERTGFSKKDFDRVLAFIETNLDKYKDSPLKDPFGESEEKSKEPFTMNDVMLAAANGYLSSLDPHSNVFLRSAWEESMA KIQDGSFEGIGAILSGGGNREVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKVVEKIKGKKGSKVALTIQRKG VSGTLHIEVVRDTIEIKNLSSKLIEGHEYIGYIKLTGFVKSEDGPSVDRELMDKYKELEKEAQTKGTRLKAVILDLRNNA GGYLDLAIDIADMFIEKGLIVSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGLVLGERTFGK ATVQKLMPLGSDYLIKLTQARYYSPSGNTIQVVGVKPDIEISSEEDGSFPFRFREENMWNHLAELPPAAEEKSSFDVKSL ETWVQKNGKASEFIAAHKNDPIKPDYQLIRSLDYIEALINTQKKK
Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=333, Percent_Identity=33.6336336336336, Blast_Score=133, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 [H]
Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 67847; Mature: 67847
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGSVTFSSLLSILLTIFILYCEPTSGKSPAKADFTLKDFDNVISTVSRYYIDKNIDKN CCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH RAYREAAIYALLSLPHSIYLYPESYFKEREKYEEKDEIFPGKTFKISTDDSFILFDPDYT HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEECCCHH EVEKIRDRKLKEDANRSKVNDEEVKKIVEREKIRKNVLSSKWERTGFSKKDFDRVLAFIE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TNLDKYKDSPLKDPFGESEEKSKEPFTMNDVMLAAANGYLSSLDPHSNVFLRSAWEESMA HHHHHHCCCCCCCCCCCCHHHCCCCCCHHHEEEEECCCCHHCCCCCCCHHHHHHHHHHHH KIQDGSFEGIGAILSGGGNREVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKV HHCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH VEKIKGKKGSKVALTIQRKGVSGTLHIEVVRDTIEIKNLSSKLIEGHEYIGYIKLTGFVK HHHHCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEE SEDGPSVDRELMDKYKELEKEAQTKGTRLKAVILDLRNNAGGYLDLAIDIADMFIEKGLI CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEHHHHHHHHHCCEE VSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGLVLGERTFGK EECCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCH ATVQKLMPLGSDYLIKLTQARYYSPSGNTIQVVGVKPDIEISSEEDGSFPFRFREENMWN HHHHHHHCCCCCCEEEEEHHEEECCCCCEEEEEEECCCCEECCCCCCCCCEEECCCHHHH HLAELPPAAEEKSSFDVKSLETWVQKNGKASEFIAAHKNDPIKPDYQLIRSLDYIEALIN HHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH TQKKK HCCCC >Mature Secondary Structure MKKGSVTFSSLLSILLTIFILYCEPTSGKSPAKADFTLKDFDNVISTVSRYYIDKNIDKN CCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH RAYREAAIYALLSLPHSIYLYPESYFKEREKYEEKDEIFPGKTFKISTDDSFILFDPDYT HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEECCCHH EVEKIRDRKLKEDANRSKVNDEEVKKIVEREKIRKNVLSSKWERTGFSKKDFDRVLAFIE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TNLDKYKDSPLKDPFGESEEKSKEPFTMNDVMLAAANGYLSSLDPHSNVFLRSAWEESMA HHHHHHCCCCCCCCCCCCHHHCCCCCCHHHEEEEECCCCHHCCCCCCCHHHHHHHHHHHH KIQDGSFEGIGAILSGGGNREVVVENPLEGRPAVNAGIRSGDVILAVDGKSIKGILLDKV HHCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH VEKIKGKKGSKVALTIQRKGVSGTLHIEVVRDTIEIKNLSSKLIEGHEYIGYIKLTGFVK HHHHCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEE SEDGPSVDRELMDKYKELEKEAQTKGTRLKAVILDLRNNAGGYLDLAIDIADMFIEKGLI CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEHHHHHHHHHCCEE VSTKSPNRSPEDAYAKNKDITNLPLAVLINAKSASASEIVASAIKHHGRGLVLGERTFGK EECCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCH ATVQKLMPLGSDYLIKLTQARYYSPSGNTIQVVGVKPDIEISSEEDGSFPFRFREENMWN HHHHHHHCCCCCCEEEEEHHEEECCCCCEEEEEEECCCCEECCCCCCCCCEEECCCHHHH HLAELPPAAEEKSSFDVKSLETWVQKNGKASEFIAAHKNDPIKPDYQLIRSLDYIEALIN HHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH TQKKK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9141685 [H]