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The map label for this gene is ypdP [H]

Identifier: 116328290

GI number: 116328290

Start: 1903831

End: 1904529

Strand: Reverse

Name: ypdP [H]

Synonym: LBL_1625

Alternate gene names: 116328290

Gene position: 1904529-1903831 (Counterclockwise)

Preceding gene: 116328293

Following gene: 116328289

Centisome position: 52.69

GC content: 40.34

Gene sequence:

>699_bases
ATGCCTCTTTCTAAATCCCAGAAATTATTCATCATTCTAAATGCTTTCTTTTTGACGTTCTTGATCCTTGCGGAAGTGAC
AGGCTCCAAACTTTTTGTTTCTTTTGGTTTTACGCTTACGATGGGCGTAATACCATTTCCGGTTACATTCATTGTGACCG
ATCTTCTGAACGAATACTATGGAAGAAAGGGAGTTCGTTTTACCACACTTTTGGGAATGGTGATGATTTTCCTGGCTTAC
TTCCTTTTGATGTTGGACATGCTGATTCCGGCAGCCCCGAATTCTCCGGTGGACAACCATTCTTTCAATGTAGTTTTCTC
GAATTCGGGAAAGGTCATTGTCGGTTCGATTGTGGCATATTTGATCGGACAATTGATCGATATTCAGATCTTTCACTTTC
TCAGAATAAAAACCGAGAACAAATATATTTGGTTACGAGCCACCGGTTCCACAATCGTTTCGCAGCTCGTTGACTCTTTC
GTAGTAATTTATATTGCGCTTAGCGGAGGAAAACTCAGTTTTCAGGAACTAAATCAGATTTCCACAAACAACTTCATTTA
CAAATGCGGAGTTGCAATTGCGATTACTCCGTTGATTTACGGGGCGCATCATTGTATCAATTGGTATTTAGGTAAAGAAG
CGGAAGAAATGATTGAATTCGCGATGAAAGAAGGACGATCCGATATCAAACCGGATTGA

Upstream 100 bases:

>100_bases
CTAAGTTGAAGTAATTTGAAATTCATTTCCAGAAATTTATTGGGTTAAGGGTTGTCAATACAAGTTGACGAATATGTGAG
ATCAAGGGAAAAAACCGCTT

Downstream 100 bases:

>100_bases
AATTCAAACGAATCTCCCTCAAGTGAATTTAAGGTTTCTAAAGGAGAAGTATATGCCTAAGGTTTTGGTCCCATTCGCAG
AAGGAATGGAAGCGGTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MPLSKSQKLFIILNAFFLTFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLNEYYGRKGVRFTTLLGMVMIFLAY
FLLMLDMLIPAAPNSPVDNHSFNVVFSNSGKVIVGSIVAYLIGQLIDIQIFHFLRIKTENKYIWLRATGSTIVSQLVDSF
VVIYIALSGGKLSFQELNQISTNNFIYKCGVAIAITPLIYGAHHCINWYLGKEAEEMIEFAMKEGRSDIKPD

Sequences:

>Translated_232_residues
MPLSKSQKLFIILNAFFLTFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLNEYYGRKGVRFTTLLGMVMIFLAY
FLLMLDMLIPAAPNSPVDNHSFNVVFSNSGKVIVGSIVAYLIGQLIDIQIFHFLRIKTENKYIWLRATGSTIVSQLVDSF
VVIYIALSGGKLSFQELNQISTNNFIYKCGVAIAITPLIYGAHHCINWYLGKEAEEMIEFAMKEGRSDIKPD
>Mature_231_residues
PLSKSQKLFIILNAFFLTFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLNEYYGRKGVRFTTLLGMVMIFLAYF
LLMLDMLIPAAPNSPVDNHSFNVVFSNSGKVIVGSIVAYLIGQLIDIQIFHFLRIKTENKYIWLRATGSTIVSQLVDSFV
VIYIALSGGKLSFQELNQISTNNFIYKCGVAIAITPLIYGAHHCINWYLGKEAEEMIEFAMKEGRSDIKPD

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 26021; Mature: 25890

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSKSQKLFIILNAFFLTFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLNEYY
CCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
GRKGVRFTTLLGMVMIFLAYFLLMLDMLIPAAPNSPVDNHSFNVVFSNSGKVIVGSIVAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
LIGQLIDIQIFHFLRIKTENKYIWLRATGSTIVSQLVDSFVVIYIALSGGKLSFQELNQI
HHHHHHHHHHHHHEEEEECCEEEEEEECHHHHHHHHHHHHHHHEEEECCCEECHHHHHHH
STNNFIYKCGVAIAITPLIYGAHHCINWYLGKEAEEMIEFAMKEGRSDIKPD
CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PLSKSQKLFIILNAFFLTFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLNEYY
CCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
GRKGVRFTTLLGMVMIFLAYFLLMLDMLIPAAPNSPVDNHSFNVVFSNSGKVIVGSIVAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
LIGQLIDIQIFHFLRIKTENKYIWLRATGSTIVSQLVDSFVVIYIALSGGKLSFQELNQI
HHHHHHHHHHHHHEEEEECCEEEEEEECHHHHHHHHHHHHHHHEEEECCCEECHHHHHHH
STNNFIYKCGVAIAITPLIYGAHHCINWYLGKEAEEMIEFAMKEGRSDIKPD
CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]