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The map label for this gene is 116328276

Identifier: 116328276

GI number: 116328276

Start: 1883152

End: 1884348

Strand: Direct

Name: 116328276

Synonym: LBL_1607

Alternate gene names: NA

Gene position: 1883152-1884348 (Clockwise)

Preceding gene: 116328275

Following gene: 116328279

Centisome position: 52.1

GC content: 39.1

Gene sequence:

>1197_bases
ATGTTAAGCGAAGAAGAATCGTCGGAACTTTCGAAGACAATCTCCGAAATTAAAAACAGCGGGATTCGATCCGAAGTGAT
CGAGCGAAGATTTAAAACTCTTCGTATACTCTTCTCCATAGGCTTTTTTACGTTCCTAAGCGTGGCGTCGGTTATTACGT
TAGCGCATAGAATTTTTAAATTGGAAGCAACCGTCGAAAAACAAACGATTCATATCACCAATCTCGAAGAAAGTTTAACC
TCGCTTCGTCTCGAAGAACAACAACAGGAAGAAGAGCTTCTCAAGTTTAAATCGGATCTTTATGATGCAGTTCCCGACGG
AGATTTATCCGACCAGGTTTCTGAAAATAAGATAAACTTGGAAGTTCTTGTAGGTTCCGACGTGGGTAAAAACATCAATC
GGGGAGATGTTCGTTTTAAAGAAATCGCTTTAACTTTCGATTTGGGGACGGGAGAGGATCTTAAGTTGATTTACGAATAT
CTTTCCCAGTTTCCCATCAAAATCACGTTATTTGTCTCGAATGAAAACCCGGCGCTCAAAAACGGTTCGTTCTTCAGCAA
CACAAATCTACGCTACTTGAAAAAGCTTTCCGAACTCGGAGATCGAGTTGTTTTTGGAAACCATACTTGGAGTCATTATA
ATATTCCAAGAAGTTTATACGAAACTTCTTTACGTAAAAGAATTTTGCTCAGTTACGTTTCTGACGAAATCCCGGACGCC
AATTTTCTTCAACAAGAAATGAGAATGGTGGAAGAGAAATTCGAATCCATTACAGGTAAACAATTGACTAAATACTACCG
TCTTCCTTATGGAGGTTTTGATCCTCTGGTAATTCAAACCTTCGGAAAACTCGGTTATACACATCATATTTTTTGGAGCA
ATAATTCGGTCGGTTCTTTGGATATTCCGGATTTCGTATATAAAAAATTTATTTATAAGAAAGATCCTAAAACCGGCAAA
ACGAGGATTATGCCGAATCCGAATTATAAGACTAGAGCCGAAGCGCTGGATTTTCTTTATCGTTGGGAAGAGGCGGATAA
AGATGGTATGAACGGAGCCATCATTTTGATGCATTTAGGTTCCCCAAGACAATCGGAAAAGCTCATCTATATTCTTCCGG
ATTTTATCCGGGAAATGCTTTCCAAGGGTTATAGTTTTGTAACGGTCCCTGAAATTATCAACGATCACCAGGATTGA

Upstream 100 bases:

>100_bases
GGAATACTTAATAAGGCAGGGAAAAAAGGGAAAATTTTTGAAAATTCTTTCCTAAAAATGATTTGAAGCTTTTGAAATTT
TTCATTTCAATCAAATCCTC

Downstream 100 bases:

>100_bases
TTTCTTCTGAGAAAATTGCAAATTGTGGGGGAGATTTTTCTCTCCAGCTGATATCTGAATTTATTGAGGGTTTGTTCTAA
AGTCTTGGACTGTAGGAGTT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLSEEESSELSKTISEIKNSGIRSEVIERRFKTLRILFSIGFFTFLSVASVITLAHRIFKLEATVEKQTIHITNLEESLT
SLRLEEQQQEEELLKFKSDLYDAVPDGDLSDQVSENKINLEVLVGSDVGKNINRGDVRFKEIALTFDLGTGEDLKLIYEY
LSQFPIKITLFVSNENPALKNGSFFSNTNLRYLKKLSELGDRVVFGNHTWSHYNIPRSLYETSLRKRILLSYVSDEIPDA
NFLQQEMRMVEEKFESITGKQLTKYYRLPYGGFDPLVIQTFGKLGYTHHIFWSNNSVGSLDIPDFVYKKFIYKKDPKTGK
TRIMPNPNYKTRAEALDFLYRWEEADKDGMNGAIILMHLGSPRQSEKLIYILPDFIREMLSKGYSFVTVPEIINDHQD

Sequences:

>Translated_398_residues
MLSEEESSELSKTISEIKNSGIRSEVIERRFKTLRILFSIGFFTFLSVASVITLAHRIFKLEATVEKQTIHITNLEESLT
SLRLEEQQQEEELLKFKSDLYDAVPDGDLSDQVSENKINLEVLVGSDVGKNINRGDVRFKEIALTFDLGTGEDLKLIYEY
LSQFPIKITLFVSNENPALKNGSFFSNTNLRYLKKLSELGDRVVFGNHTWSHYNIPRSLYETSLRKRILLSYVSDEIPDA
NFLQQEMRMVEEKFESITGKQLTKYYRLPYGGFDPLVIQTFGKLGYTHHIFWSNNSVGSLDIPDFVYKKFIYKKDPKTGK
TRIMPNPNYKTRAEALDFLYRWEEADKDGMNGAIILMHLGSPRQSEKLIYILPDFIREMLSKGYSFVTVPEIINDHQD
>Mature_398_residues
MLSEEESSELSKTISEIKNSGIRSEVIERRFKTLRILFSIGFFTFLSVASVITLAHRIFKLEATVEKQTIHITNLEESLT
SLRLEEQQQEEELLKFKSDLYDAVPDGDLSDQVSENKINLEVLVGSDVGKNINRGDVRFKEIALTFDLGTGEDLKLIYEY
LSQFPIKITLFVSNENPALKNGSFFSNTNLRYLKKLSELGDRVVFGNHTWSHYNIPRSLYETSLRKRILLSYVSDEIPDA
NFLQQEMRMVEEKFESITGKQLTKYYRLPYGGFDPLVIQTFGKLGYTHHIFWSNNSVGSLDIPDFVYKKFIYKKDPKTGK
TRIMPNPNYKTRAEALDFLYRWEEADKDGMNGAIILMHLGSPRQSEKLIYILPDFIREMLSKGYSFVTVPEIINDHQD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46016; Mature: 46016

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEEESSELSKTISEIKNSGIRSEVIERRFKTLRILFSIGFFTFLSVASVITLAHRIFK
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEATVEKQTIHITNLEESLTSLRLEEQQQEEELLKFKSDLYDAVPDGDLSDQVSENKINL
HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
EVLVGSDVGKNINRGDVRFKEIALTFDLGTGEDLKLIYEYLSQFPIKITLFVSNENPALK
EEEECCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCC
NGSFFSNTNLRYLKKLSELGDRVVFGNHTWSHYNIPRSLYETSLRKRILLSYVSDEIPDA
CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
NFLQQEMRMVEEKFESITGKQLTKYYRLPYGGFDPLVIQTFGKLGYTHHIFWSNNSVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCC
DIPDFVYKKFIYKKDPKTGKTRIMPNPNYKTRAEALDFLYRWEEADKDGMNGAIILMHLG
CCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
SPRQSEKLIYILPDFIREMLSKGYSFVTVPEIINDHQD
CCCCCCCEEEECHHHHHHHHHCCCCEEECHHHHCCCCC
>Mature Secondary Structure
MLSEEESSELSKTISEIKNSGIRSEVIERRFKTLRILFSIGFFTFLSVASVITLAHRIFK
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEATVEKQTIHITNLEESLTSLRLEEQQQEEELLKFKSDLYDAVPDGDLSDQVSENKINL
HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
EVLVGSDVGKNINRGDVRFKEIALTFDLGTGEDLKLIYEYLSQFPIKITLFVSNENPALK
EEEECCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCC
NGSFFSNTNLRYLKKLSELGDRVVFGNHTWSHYNIPRSLYETSLRKRILLSYVSDEIPDA
CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
NFLQQEMRMVEEKFESITGKQLTKYYRLPYGGFDPLVIQTFGKLGYTHHIFWSNNSVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCC
DIPDFVYKKFIYKKDPKTGKTRIMPNPNYKTRAEALDFLYRWEEADKDGMNGAIILMHLG
CCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
SPRQSEKLIYILPDFIREMLSKGYSFVTVPEIINDHQD
CCCCCCCEEEECHHHHHHHHHCCCCEEECHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA