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The map label for this gene is mcrA

Identifier: 116328236

GI number: 116328236

Start: 1821427

End: 1821981

Strand: Reverse

Name: mcrA

Synonym: LBL_1560

Alternate gene names: NA

Gene position: 1821981-1821427 (Counterclockwise)

Preceding gene: 116328237

Following gene: 116328235

Centisome position: 50.41

GC content: 42.34

Gene sequence:

>555_bases
ATGGACATTCTTGCGCAGCCAGTGCTCGTGCTGAATGCCGGTTACGTTCCCATCGGGATTCGGTCGGTCAAAGATGCCCT
GATTCTAATCATCCTTGAAAAAGCACAACTCATCAAGGATGATAAAAATTTTTTAATCCGTTCCGAAAAACTCAAATTCA
CCGCACCTAGAATCATACTTCTCCGGGACTATTACAGAGTTCCTCCCAGAAGGGATCGAGTTTCCAGGGAAAATATTTTT
CAAAGAGATAACTATCATTGTGTCTATTGTAGAAAAAAATTTCCAAGTGCAAAGCTTACACTCGACCACGTAATTCCACG
GAGTCGATGGGAACACGTTCCCAAAAAAGAAAGGCCGAAGGAATTCAATTCTTGGGAAAATCTGGTTGCCGCATGCAGAC
ATTGCAACACTCGAAAAGGAAATAAACTTCTCGCCGAATTGAAATGGAACTTACCGGAAGAAAATCGAGTGACACCCAAG
TTAAGATTTCCACTCTACTCAATATCGGACCAGCAGGTAGAAAAGTTCGGTTGGCGGGAGTATATTTCTTTTTGA

Upstream 100 bases:

>100_bases
TTTTTATTTTTCGGAATCGCCTATTGGATCCGAAAGAAACGTTCTTAACCTAGAGAATTTCTTTACATCTTCCAGCCATC
GGTTATTTTTTGACTAGTTT

Downstream 100 bases:

>100_bases
AACGTTTTTATATTTCGCTTTTGTTTCCAGTATTTTCACTTTTACTCGGTTGTCCCCACTATTCCACAACACGTCTGATA
ACTACCCCGCCTACTTTGGT

Product: restriction endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Nuclease; Hnh Endonuclease; HNH Endonuclease Domain Protein; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; 5-Methylcytosine-Specific Restriction A

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKNFLIRSEKLKFTAPRIILLRDYYRVPPRRDRVSRENIF
QRDNYHCVYCRKKFPSAKLTLDHVIPRSRWEHVPKKERPKEFNSWENLVAACRHCNTRKGNKLLAELKWNLPEENRVTPK
LRFPLYSISDQQVEKFGWREYISF

Sequences:

>Translated_184_residues
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKNFLIRSEKLKFTAPRIILLRDYYRVPPRRDRVSRENIF
QRDNYHCVYCRKKFPSAKLTLDHVIPRSRWEHVPKKERPKEFNSWENLVAACRHCNTRKGNKLLAELKWNLPEENRVTPK
LRFPLYSISDQQVEKFGWREYISF
>Mature_184_residues
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKNFLIRSEKLKFTAPRIILLRDYYRVPPRRDRVSRENIF
QRDNYHCVYCRKKFPSAKLTLDHVIPRSRWEHVPKKERPKEFNSWENLVAACRHCNTRKGNKLLAELKWNLPEENRVTPK
LRFPLYSISDQQVEKFGWREYISF

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21947; Mature: 21947

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKNFLIRSEKLKFTAPRIIL
CCCCCCCEEEEECCCCEECHHHHHHHHEEEEEHHHHHHHCCCHHEEECCCEEECCCEEEE
LRDYYRVPPRRDRVSRENIFQRDNYHCVYCRKKFPSAKLTLDHVIPRSRWEHVPKKERPK
EEHHHCCCCCHHHCCHHHHHCCCCCEEEEEECCCCCCEEEHHHHCCHHHHHCCCCCCCCC
EFNSWENLVAACRHCNTRKGNKLLAELKWNLPEENRVTPKLRFPLYSISDQQVEKFGWRE
CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEECCEECCCHHHHHHHHHHH
YISF
HHCC
>Mature Secondary Structure
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKNFLIRSEKLKFTAPRIIL
CCCCCCCEEEEECCCCEECHHHHHHHHEEEEEHHHHHHHCCCHHEEECCCEEECCCEEEE
LRDYYRVPPRRDRVSRENIFQRDNYHCVYCRKKFPSAKLTLDHVIPRSRWEHVPKKERPK
EEHHHCCCCCHHHCCHHHHHCCCCCEEEEEECCCCCCEEEHHHHCCHHHHHCCCCCCCCC
EFNSWENLVAACRHCNTRKGNKLLAELKWNLPEENRVTPKLRFPLYSISDQQVEKFGWRE
CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEECCEECCCHHHHHHHHHHH
YISF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA