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The map label for this gene is dedA [C]

Identifier: 116328237

GI number: 116328237

Start: 1822034

End: 1822639

Strand: Reverse

Name: dedA [C]

Synonym: LBL_1561

Alternate gene names: 116328237

Gene position: 1822639-1822034 (Counterclockwise)

Preceding gene: 116328240

Following gene: 116328236

Centisome position: 50.43

GC content: 42.9

Gene sequence:

>606_bases
ATGGAATTTTTAAATATTTTGGTTAATATCTTTTCGGAATACGGATACATTGCTGTCTTTTTAGCGCTCATTCTTTGCGG
TTTCGGACTTCCGGTTCCCGAAGATATTTCCTTGGTTTCCGGAGGAGTAATCGCAGGATTCGGTAAAGCGGACCCGCATT
TTATGTTTCTCATCGGAATGGCCGGTGTTCTCATCGGAGACGGCTCCGTCTTTTTAATCGGGAGAATTTACGGAGTACGT
GTTCTTCGGATTCCAATGATTTCAAGGATTGTTACTCCCGAACGTTTTGCAAAGGTTCAGGATAAAATTTCTCGCTACGG
AAACTGGGTCACTTTCATGGCTCGTTTTATGCCGGGCCTTAGAATGCCGATTTATCTCACGGCCGGAACCTCGGATCGAA
TTTCATTCTATCGTTTTGTAACCCTTGATTTTCTCGCCGCAATCATTTCGGTCCCGGTTTGGGTTTATTTGGGATATTTC
GGAGCATATAATTTCGATACCCTGATGAATTGGGTTCACAATGGACAACTTCTGATTTTCGGAGTTTTGGGAACCGTGTT
TTTATTTTTCGGAATCGCCTATTGGATCCGAAAGAAACGTTCTTAA

Upstream 100 bases:

>100_bases
TAAAAGTCTGCCCACTTTTTTTGTTTTGTTTACTGCTATTTTAAACGAGACGTTTTTTACTGTCCTGAAATCCTAAATTC
ACAAGGCATTTACTGAAGAA

Downstream 100 bases:

>100_bases
CCTAGAGAATTTCTTTACATCTTCCAGCCATCGGTTATTTTTTGACTAGTTTATGGACATTCTTGCGCAGCCAGTGCTCG
TGCTGAATGCCGGTTACGTT

Product: DedA-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MEFLNILVNIFSEYGYIAVFLALILCGFGLPVPEDISLVSGGVIAGFGKADPHFMFLIGMAGVLIGDGSVFLIGRIYGVR
VLRIPMISRIVTPERFAKVQDKISRYGNWVTFMARFMPGLRMPIYLTAGTSDRISFYRFVTLDFLAAIISVPVWVYLGYF
GAYNFDTLMNWVHNGQLLIFGVLGTVFLFFGIAYWIRKKRS

Sequences:

>Translated_201_residues
MEFLNILVNIFSEYGYIAVFLALILCGFGLPVPEDISLVSGGVIAGFGKADPHFMFLIGMAGVLIGDGSVFLIGRIYGVR
VLRIPMISRIVTPERFAKVQDKISRYGNWVTFMARFMPGLRMPIYLTAGTSDRISFYRFVTLDFLAAIISVPVWVYLGYF
GAYNFDTLMNWVHNGQLLIFGVLGTVFLFFGIAYWIRKKRS
>Mature_201_residues
MEFLNILVNIFSEYGYIAVFLALILCGFGLPVPEDISLVSGGVIAGFGKADPHFMFLIGMAGVLIGDGSVFLIGRIYGVR
VLRIPMISRIVTPERFAKVQDKISRYGNWVTFMARFMPGLRMPIYLTAGTSDRISFYRFVTLDFLAAIISVPVWVYLGYF
GAYNFDTLMNWVHNGQLLIFGVLGTVFLFFGIAYWIRKKRS

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22643; Mature: 22643

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLNILVNIFSEYGYIAVFLALILCGFGLPVPEDISLVSGGVIAGFGKADPHFMFLIGM
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCHHHHHHHH
AGVLIGDGSVFLIGRIYGVRVLRIPMISRIVTPERFAKVQDKISRYGNWVTFMARFMPGL
HHHEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCC
RMPIYLTAGTSDRISFYRFVTLDFLAAIISVPVWVYLGYFGAYNFDTLMNWVHNGQLLIF
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEH
GVLGTVFLFFGIAYWIRKKRS
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFLNILVNIFSEYGYIAVFLALILCGFGLPVPEDISLVSGGVIAGFGKADPHFMFLIGM
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCHHHHHHHH
AGVLIGDGSVFLIGRIYGVRVLRIPMISRIVTPERFAKVQDKISRYGNWVTFMARFMPGL
HHHEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCC
RMPIYLTAGTSDRISFYRFVTLDFLAAIISVPVWVYLGYFGAYNFDTLMNWVHNGQLLIF
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEH
GVLGTVFLFFGIAYWIRKKRS
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]