Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 116328192

GI number: 116328192

Start: 1773609

End: 1774223

Strand: Reverse

Name: ubiX [C]

Synonym: LBL_1516

Alternate gene names: 116328192

Gene position: 1774223-1773609 (Counterclockwise)

Preceding gene: 116328193

Following gene: 116328187

Centisome position: 49.09

GC content: 42.44

Gene sequence:

>615_bases
ATGAGGCTTGTTTTAGGAATGGCAGGAGCAAGCGGTTCCATCTACGCTGAAAGATTTATCAAAGCCCTTTTTACGATCAA
AGGGACTACGTTTTTCATCTGCAGTCCGGCTTCTCTTAGAGTGTTCCGAGAAGAAATGGAATGTAAAGTCTCCTCGCCGA
AAGAACTCCTAGACTTTATAATTTCGAAATATAAGATTCAGAATACTTCTCACGCGTTTGAAATCCGCAATTTTGCTGAC
ATCGGAGCGGATATCGGTTCGGGTTCCAATTCTTGGAAAGGGATGGTGATTCTTCCTTGTTCCATGAAGACGATCGCTTC
GATTAACGCAGGTATGACAGAGAATCTTATCGAAAGAGCGGCTGATGTTACTTTGAAAGAAAGAAGAACTCTTTTACTCG
TTCCCAGAGAAACGCCTTACAATCGGATTCATTTGAAAAATATGCTGGAACTTCATGATGCAGGCGCAATCATTCTTCCC
GCTTCTCCCGGATTTTATCAGATGCCTAAAACACTGGAGGATTTGGGCGATTTCATTAGCGAAAGAATTTTTAGGCTTTT
AGGCATGGAACTGGATCTATATCCACGATGGACTCCTCGTGATAACGACCTTTGA

Upstream 100 bases:

>100_bases
TTTATCGGTTTCATTCTTACATATCCTTGATTCTTTTCACGGGATTGTTGTCGGATCGGATTTTTTATCTTACGATTCTT
GGCGACAACGCGTATTTAAG

Downstream 100 bases:

>100_bases
ATTGGGAAATAATTCTTATTAAGCGAAGTATTCTATGTCGTGGATCTTTTTCTTGAGAGTAGATGCATCTTCGTAGTTCT
CTTTCGAGATCGCGTTGAAC

Product: 3-polyprenyl-4-hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRLVLGMAGASGSIYAERFIKALFTIKGTTFFICSPASLRVFREEMECKVSSPKELLDFIISKYKIQNTSHAFEIRNFAD
IGADIGSGSNSWKGMVILPCSMKTIASINAGMTENLIERAADVTLKERRTLLLVPRETPYNRIHLKNMLELHDAGAIILP
ASPGFYQMPKTLEDLGDFISERIFRLLGMELDLYPRWTPRDNDL

Sequences:

>Translated_204_residues
MRLVLGMAGASGSIYAERFIKALFTIKGTTFFICSPASLRVFREEMECKVSSPKELLDFIISKYKIQNTSHAFEIRNFAD
IGADIGSGSNSWKGMVILPCSMKTIASINAGMTENLIERAADVTLKERRTLLLVPRETPYNRIHLKNMLELHDAGAIILP
ASPGFYQMPKTLEDLGDFISERIFRLLGMELDLYPRWTPRDNDL
>Mature_204_residues
MRLVLGMAGASGSIYAERFIKALFTIKGTTFFICSPASLRVFREEMECKVSSPKELLDFIISKYKIQNTSHAFEIRNFAD
IGADIGSGSNSWKGMVILPCSMKTIASINAGMTENLIERAADVTLKERRTLLLVPRETPYNRIHLKNMLELHDAGAIILP
ASPGFYQMPKTLEDLGDFISERIFRLLGMELDLYPRWTPRDNDL

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=199, Percent_Identity=36.1809045226131, Blast_Score=124, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6320746, Length=196, Percent_Identity=38.265306122449, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22996; Mature: 22996

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVLGMAGASGSIYAERFIKALFTIKGTTFFICSPASLRVFREEMECKVSSPKELLDFI
CEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHH
ISKYKIQNTSHAFEIRNFADIGADIGSGSNSWKGMVILPCSMKTIASINAGMTENLIERA
HHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHCCCCHHHHHHHHH
ADVTLKERRTLLLVPRETPYNRIHLKNMLELHDAGAIILPASPGFYQMPKTLEDLGDFIS
HCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHH
ERIFRLLGMELDLYPRWTPRDNDL
HHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRLVLGMAGASGSIYAERFIKALFTIKGTTFFICSPASLRVFREEMECKVSSPKELLDFI
CEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHH
ISKYKIQNTSHAFEIRNFADIGADIGSGSNSWKGMVILPCSMKTIASINAGMTENLIERA
HHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHCCCCHHHHHHHHH
ADVTLKERRTLLLVPRETPYNRIHLKNMLELHDAGAIILPASPGFYQMPKTLEDLGDFIS
HCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHH
ERIFRLLGMELDLYPRWTPRDNDL
HHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]