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The map label for this gene is ubiA [H]

Identifier: 116328193

GI number: 116328193

Start: 1774220

End: 1775134

Strand: Reverse

Name: ubiA [H]

Synonym: LBL_1517

Alternate gene names: 116328193

Gene position: 1775134-1774220 (Counterclockwise)

Preceding gene: 116328200

Following gene: 116328192

Centisome position: 49.11

GC content: 40.0

Gene sequence:

>915_bases
ATGAACACATCACTAACCTCCCTGAAGCAATATGGAAGTCTCATCAAATTTTCTCATACACTGTTTGCTCTCCCTTTTGC
GGGAATCGCATTTATTCTTGCGTTCTTAAAGACACACGGAAAGTCCGTTTTGGATTGGACGATTCTTTCGATTCTTATTT
TGTTTTCGATGGTCTTTGCAAGGTCTGCAGCGATGGGTTTCAATCGAATCGTGGACACGGACATCGACGCACAAAACGAG
CGCACCAAAAAACGAGAAATTCCGGCGGGAAAAATTTCAAAACGCTCCGCGGTATTGTTCGTCGTTTTATCTTCTTTAGG
ATTTTTTATTGCGAGCTGGTTCATCAATCCTATGACTTGGCGACTTTCTTTTCCAACTCTTATGATTCTTTTGGGATATT
CTTTCTCAAAAAGATTTACTTGGCTCTGCCATTTCATTTTAGGCTTTTCGATTGGTCTGGCGCCTCTTGCAACTTGGGTC
GCGATACGAGAAGAAATCGTCTTGGAACCAATTTTGTGGACAATTGGACTTGCTTTCAATCTTGCGGGGTTTGATATTCT
TTACGCTCTTCAAGATCAGAATTTCGATCGAAAGGAAGGTCTTTATTCGATTCCTGCAAAATTCGGAAGAAAAAATTCTC
TTTCAATCGCAATTGTAAGTCACGTTTTTTGCATCTGCTTTTTATTTGCGGCGGGAATCGTTTCGAATTTGGGGCCGATC
TTTTTAATTTTTTTGACGGTTACAGGATATCTCCTATTTCAAGAACATAAAATCGCGAGGGCTTGCGGAGAAAATCTTTT
TCCTGCAAAATTTTATCGGTTTCATTCTTACATATCCTTGATTCTTTTCACGGGATTGTTGTCGGATCGGATTTTTTATC
TTACGATTCTTGGCGACAACGCGTATTTAAGATGA

Upstream 100 bases:

>100_bases
ACGTATCCTTTTAAGAAGGCGAAAAAAATCATCGCTTTTTAAACTTTCTCTTGGATTTTATGTAGGAAAAGAACCTTGGA
ATTTTAAAATCTTATCCCTC

Downstream 100 bases:

>100_bases
GGCTTGTTTTAGGAATGGCAGGAGCAAGCGGTTCCATCTACGCTGAAAGATTTATCAAAGCCCTTTTTACGATCAAAGGG
ACTACGTTTTTCATCTGCAG

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNTSLTSLKQYGSLIKFSHTLFALPFAGIAFILAFLKTHGKSVLDWTILSILILFSMVFARSAAMGFNRIVDTDIDAQNE
RTKKREIPAGKISKRSAVLFVVLSSLGFFIASWFINPMTWRLSFPTLMILLGYSFSKRFTWLCHFILGFSIGLAPLATWV
AIREEIVLEPILWTIGLAFNLAGFDILYALQDQNFDRKEGLYSIPAKFGRKNSLSIAIVSHVFCICFLFAAGIVSNLGPI
FLIFLTVTGYLLFQEHKIARACGENLFPAKFYRFHSYISLILFTGLLSDRIFYLTILGDNAYLR

Sequences:

>Translated_304_residues
MNTSLTSLKQYGSLIKFSHTLFALPFAGIAFILAFLKTHGKSVLDWTILSILILFSMVFARSAAMGFNRIVDTDIDAQNE
RTKKREIPAGKISKRSAVLFVVLSSLGFFIASWFINPMTWRLSFPTLMILLGYSFSKRFTWLCHFILGFSIGLAPLATWV
AIREEIVLEPILWTIGLAFNLAGFDILYALQDQNFDRKEGLYSIPAKFGRKNSLSIAIVSHVFCICFLFAAGIVSNLGPI
FLIFLTVTGYLLFQEHKIARACGENLFPAKFYRFHSYISLILFTGLLSDRIFYLTILGDNAYLR
>Mature_304_residues
MNTSLTSLKQYGSLIKFSHTLFALPFAGIAFILAFLKTHGKSVLDWTILSILILFSMVFARSAAMGFNRIVDTDIDAQNE
RTKKREIPAGKISKRSAVLFVVLSSLGFFIASWFINPMTWRLSFPTLMILLGYSFSKRFTWLCHFILGFSIGLAPLATWV
AIREEIVLEPILWTIGLAFNLAGFDILYALQDQNFDRKEGLYSIPAKFGRKNSLSIAIVSHVFCICFLFAAGIVSNLGPI
FLIFLTVTGYLLFQEHKIARACGENLFPAKFYRFHSYISLILFTGLLSDRIFYLTILGDNAYLR

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790473, Length=228, Percent_Identity=29.3859649122807, Blast_Score=74, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17553718, Length=234, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355567, Length=250, Percent_Identity=26.4, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 34356; Mature: 34356

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSLTSLKQYGSLIKFSHTLFALPFAGIAFILAFLKTHGKSVLDWTILSILILFSMVFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RSAAMGFNRIVDTDIDAQNERTKKREIPAGKISKRSAVLFVVLSSLGFFIASWFINPMTW
HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHE
RLSFPTLMILLGYSFSKRFTWLCHFILGFSIGLAPLATWVAIREEIVLEPILWTIGLAFN
EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGFDILYALQDQNFDRKEGLYSIPAKFGRKNSLSIAIVSHVFCICFLFAAGIVSNLGPI
HHHHHHEEEECCCCCCHHCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
FLIFLTVTGYLLFQEHKIARACGENLFPAKFYRFHSYISLILFTGLLSDRIFYLTILGDN
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
AYLR
CCCC
>Mature Secondary Structure
MNTSLTSLKQYGSLIKFSHTLFALPFAGIAFILAFLKTHGKSVLDWTILSILILFSMVFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RSAAMGFNRIVDTDIDAQNERTKKREIPAGKISKRSAVLFVVLSSLGFFIASWFINPMTW
HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHE
RLSFPTLMILLGYSFSKRFTWLCHFILGFSIGLAPLATWVAIREEIVLEPILWTIGLAFN
EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGFDILYALQDQNFDRKEGLYSIPAKFGRKNSLSIAIVSHVFCICFLFAAGIVSNLGPI
HHHHHHEEEECCCCCCHHCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
FLIFLTVTGYLLFQEHKIARACGENLFPAKFYRFHSYISLILFTGLLSDRIFYLTILGDN
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
AYLR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA