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The map label for this gene is yidK [H]

Identifier: 116328107

GI number: 116328107

Start: 1637790

End: 1639265

Strand: Reverse

Name: yidK [H]

Synonym: LBL_1405

Alternate gene names: 116328107

Gene position: 1639265-1637790 (Counterclockwise)

Preceding gene: 116328109

Following gene: 116328102

Centisome position: 45.35

GC content: 38.96

Gene sequence:

>1476_bases
ATGCACTTTTCAATTTTAGATCTAATCGTTCTACTTTTATACATAATATTGGTCCTTTTTTCCGGATGGCTCACTTCCAG
AAAAAAAGACAAAGATTCTTCTTCTTATTTTCTCGCAGGAAGAGAAATTTCCTGGATCGCGTTGAGTTTTTCGATTGTTG
CCACAGAAACTTCAACTCTTACTTTTTTGAATATTCCTGGACTGAGTTATTCCGGTAATCTCACCTTTCTCGGACTCGGT
TTGGGTTTTGTTTTAGGAAGAATCATCGTAGCCGAACTTTTTATTCCAATGTATTACAAATCGGGGTTTATTTCCGTGTA
CGAATGGGTAGGAATCCGTTATGGAAAAATTTCCCAAAAAACGGTTACCTTTCTTTTTAAACTCACCCGAATCTTAGGAG
ACGGAGTGAGAATGTACGCCTCCGCGATTCCGGTCTCGATCCTATTGGAAGTATTTTTAAAACAATATAGTGTAATGGAG
ATAATGACTCATAACGTAGAAATTCTGAGTCTTCTTTTAATTTCGGGAATTACGATTCTTTATACGGTTCAAGGTGGATT
TCGTTCCGTCGTTTGGGTGGATTCAATTCAATTTTTGATCTACGTTGCGGGAGGAATTTTCACATTTTTTTACTTAGGCA
ATTTACTTTTAGAAAAAGGCTTAAACGTTTCCGATCTGATTCAGAATGCGTTTCAGGTAAATAAGTTCAAAATTTTCGAA
TGGAATGATTTTACTTCCGCATATTTTGCACCGACAGCGATTTTGGGGGGAATTCTTTTAACGTTAGGAACCCACGGAGT
GGATCAGATGCTCGTACAAAGAGTTCTTGCTTGCCGATCCGAACCGGATGCCAAGAAAGCGATAATTTCTTCGGGAGTTT
TTGTTTTCTTTCAGTTCGTATTATTTTTAAGTATCGGAATTTTATTATATTTTTACTATGAAGGTTCCGCTATCTCCAAA
GATAAGGTTTTTTCCAAATTCATTATGGAGGAAGTACCTTCTCCGATCACGGGATTTTTGTTGGCCGCTATTTTGGCTTC
CGCGATGTCCACTTTATCGAGTTCGATCAATTCGCTTTCCTTAACGACCAAGGTAGACTTAGGAATTGACAGGTTCGGTT
CGGGAACATTGAGTTTATTTTGGGGAACGATCCTCCTTTTGAGTTCCCTCTTTCCGCTCTTTTTAACGGCGGGAAAAACG
GGCCTAGTAGAACTGGGTTTGTCGATCGCTTCCTATACGGTCGGTCCGATCATTGCGATTTTTTTAAGCGGCAAAATTCA
AAGTTTTTCTTACATGCAGAATTTAAAAGATAGTTTCGCGTCCCTGTCCATAGGACTGACTCCGATTCTGACTTTGATCT
TCGGAAAATGGACCGGTTTCGGCTTTACTCTGCTCGTTCCTTTTGGAATCGGAACTTGTTTTTTAGTTGGATTCAGTTTA
TTGCAAATTCAGAATCGTCCAACTTCTCAAAAATAG

Upstream 100 bases:

>100_bases
AACGAGATACATTAGCGATGCTCAATTCCGAAATATTGAGAAACAGATTCTAAGGGAAAAAGAGTTTTCTTGATCTTACC
GAAATACATTTTGACTGATG

Downstream 100 bases:

>100_bases
ATTCTAAAACTCTTTTAAACTCGGACATTTTTGTGAAGTGGATATAATGATCCCCACCCGGAATCGTGTAAAATTGAGAA
TTCGGAAAAAAGTTTCGAGT

Product: Sodium/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MHFSILDLIVLLLYIILVLFSGWLTSRKKDKDSSSYFLAGREISWIALSFSIVATETSTLTFLNIPGLSYSGNLTFLGLG
LGFVLGRIIVAELFIPMYYKSGFISVYEWVGIRYGKISQKTVTFLFKLTRILGDGVRMYASAIPVSILLEVFLKQYSVME
IMTHNVEILSLLLISGITILYTVQGGFRSVVWVDSIQFLIYVAGGIFTFFYLGNLLLEKGLNVSDLIQNAFQVNKFKIFE
WNDFTSAYFAPTAILGGILLTLGTHGVDQMLVQRVLACRSEPDAKKAIISSGVFVFFQFVLFLSIGILLYFYYEGSAISK
DKVFSKFIMEEVPSPITGFLLAAILASAMSTLSSSINSLSLTTKVDLGIDRFGSGTLSLFWGTILLLSSLFPLFLTAGKT
GLVELGLSIASYTVGPIIAIFLSGKIQSFSYMQNLKDSFASLSIGLTPILTLIFGKWTGFGFTLLVPFGIGTCFLVGFSL
LQIQNRPTSQK

Sequences:

>Translated_491_residues
MHFSILDLIVLLLYIILVLFSGWLTSRKKDKDSSSYFLAGREISWIALSFSIVATETSTLTFLNIPGLSYSGNLTFLGLG
LGFVLGRIIVAELFIPMYYKSGFISVYEWVGIRYGKISQKTVTFLFKLTRILGDGVRMYASAIPVSILLEVFLKQYSVME
IMTHNVEILSLLLISGITILYTVQGGFRSVVWVDSIQFLIYVAGGIFTFFYLGNLLLEKGLNVSDLIQNAFQVNKFKIFE
WNDFTSAYFAPTAILGGILLTLGTHGVDQMLVQRVLACRSEPDAKKAIISSGVFVFFQFVLFLSIGILLYFYYEGSAISK
DKVFSKFIMEEVPSPITGFLLAAILASAMSTLSSSINSLSLTTKVDLGIDRFGSGTLSLFWGTILLLSSLFPLFLTAGKT
GLVELGLSIASYTVGPIIAIFLSGKIQSFSYMQNLKDSFASLSIGLTPILTLIFGKWTGFGFTLLVPFGIGTCFLVGFSL
LQIQNRPTSQK
>Mature_491_residues
MHFSILDLIVLLLYIILVLFSGWLTSRKKDKDSSSYFLAGREISWIALSFSIVATETSTLTFLNIPGLSYSGNLTFLGLG
LGFVLGRIIVAELFIPMYYKSGFISVYEWVGIRYGKISQKTVTFLFKLTRILGDGVRMYASAIPVSILLEVFLKQYSVME
IMTHNVEILSLLLISGITILYTVQGGFRSVVWVDSIQFLIYVAGGIFTFFYLGNLLLEKGLNVSDLIQNAFQVNKFKIFE
WNDFTSAYFAPTAILGGILLTLGTHGVDQMLVQRVLACRSEPDAKKAIISSGVFVFFQFVLFLSIGILLYFYYEGSAISK
DKVFSKFIMEEVPSPITGFLLAAILASAMSTLSSSINSLSLTTKVDLGIDRFGSGTLSLFWGTILLLSSLFPLFLTAGKT
GLVELGLSIASYTVGPIIAIFLSGKIQSFSYMQNLKDSFASLSIGLTPILTLIFGKWTGFGFTLLVPFGIGTCFLVGFSL
LQIQNRPTSQK

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI4507035, Length=360, Percent_Identity=28.0555555555556, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI157671931, Length=439, Percent_Identity=25.7403189066059, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI256985183, Length=345, Percent_Identity=27.2463768115942, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI167466278, Length=350, Percent_Identity=24.5714285714286, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI17941285, Length=398, Percent_Identity=23.8693467336683, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4507031, Length=465, Percent_Identity=23.6559139784946, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI110835708, Length=407, Percent_Identity=23.0958230958231, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI14140236, Length=484, Percent_Identity=22.9338842975207, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4507033, Length=465, Percent_Identity=22.7956989247312, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI109659836, Length=498, Percent_Identity=23.0923694779116, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI109659839, Length=514, Percent_Identity=22.3735408560311, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI206597483, Length=449, Percent_Identity=22.271714922049, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1790113, Length=361, Percent_Identity=25.4847645429363, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115533094, Length=423, Percent_Identity=25.531914893617, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115533096, Length=277, Percent_Identity=27.7978339350181, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28573698, Length=461, Percent_Identity=23.8611713665944, Blast_Score=102, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24651739, Length=421, Percent_Identity=22.5653206650831, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24641117, Length=468, Percent_Identity=23.7179487179487, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24645928, Length=350, Percent_Identity=24.5714285714286, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24651741, Length=355, Percent_Identity=25.6338028169014, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281362918, Length=356, Percent_Identity=22.4719101123595, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221459584, Length=440, Percent_Identity=25.4545454545455, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574994, Length=385, Percent_Identity=24.4155844155844, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640370, Length=432, Percent_Identity=23.3796296296296, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221459588, Length=432, Percent_Identity=24.0740740740741, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24650192, Length=431, Percent_Identity=22.2737819025522, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281362054, Length=377, Percent_Identity=21.7506631299735, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281362052, Length=377, Percent_Identity=21.7506631299735, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281362050, Length=377, Percent_Identity=21.7506631299735, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648056, Length=377, Percent_Identity=21.7506631299735, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356827, Length=377, Percent_Identity=21.7506631299735, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221459586, Length=433, Percent_Identity=22.6327944572748, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI19920916, Length=362, Percent_Identity=25.6906077348066, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 54115; Mature: 54115

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFSILDLIVLLLYIILVLFSGWLTSRKKDKDSSSYFLAGREISWIALSFSIVATETSTL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEEEEEEECCCEE
TFLNIPGLSYSGNLTFLGLGLGFVLGRIIVAELFIPMYYKSGFISVYEWVGIRYGKISQK
EEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
TVTFLFKLTRILGDGVRMYASAIPVSILLEVFLKQYSVMEIMTHNVEILSLLLISGITIL
HHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEE
YTVQGGFRSVVWVDSIQFLIYVAGGIFTFFYLGNLLLEKGLNVSDLIQNAFQVNKFKIFE
EEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEE
WNDFTSAYFAPTAILGGILLTLGTHGVDQMLVQRVLACRSEPDAKKAIISSGVFVFFQFV
ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHH
LFLSIGILLYFYYEGSAISKDKVFSKFIMEEVPSPITGFLLAAILASAMSTLSSSINSLS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEE
LTTKVDLGIDRFGSGTLSLFWGTILLLSSLFPLFLTAGKTGLVELGLSIASYTVGPIIAI
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FLSGKIQSFSYMQNLKDSFASLSIGLTPILTLIFGKWTGFGFTLLVPFGIGTCFLVGFSL
HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHHH
LQIQNRPTSQK
HHHCCCCCCCC
>Mature Secondary Structure
MHFSILDLIVLLLYIILVLFSGWLTSRKKDKDSSSYFLAGREISWIALSFSIVATETSTL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEEEEEEECCCEE
TFLNIPGLSYSGNLTFLGLGLGFVLGRIIVAELFIPMYYKSGFISVYEWVGIRYGKISQK
EEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
TVTFLFKLTRILGDGVRMYASAIPVSILLEVFLKQYSVMEIMTHNVEILSLLLISGITIL
HHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEE
YTVQGGFRSVVWVDSIQFLIYVAGGIFTFFYLGNLLLEKGLNVSDLIQNAFQVNKFKIFE
EEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEE
WNDFTSAYFAPTAILGGILLTLGTHGVDQMLVQRVLACRSEPDAKKAIISSGVFVFFQFV
ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHH
LFLSIGILLYFYYEGSAISKDKVFSKFIMEEVPSPITGFLLAAILASAMSTLSSSINSLS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEE
LTTKVDLGIDRFGSGTLSLFWGTILLLSSLFPLFLTAGKTGLVELGLSIASYTVGPIIAI
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FLSGKIQSFSYMQNLKDSFASLSIGLTPILTLIFGKWTGFGFTLLVPFGIGTCFLVGFSL
HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHHH
LQIQNRPTSQK
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]