| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328037
Identifier: 116328037
GI number: 116328037
Start: 1566158
End: 1566697
Strand: Direct
Name: 116328037
Synonym: LBL_1332
Alternate gene names: NA
Gene position: 1566158-1566697 (Clockwise)
Preceding gene: 116328036
Following gene: 116328043
Centisome position: 43.33
GC content: 39.44
Gene sequence:
>540_bases ATGAAACTTCTAAAACTGATCCTTCCGGTCACATTAATCCTTCCAGTTTTGTTCTTCAGTTGGGAGATTGTGACTCTCGA ATTTTCAAAGAGTTCGGGAAAAGAAGTGGTTCTTCCCATTACTGGATACGATCCGAGAGATCTTCTTGCGGGACATTATC TGCGTTATGATATCTTGTATCAATCGGATTCCATCTGTCAAAATCCCAATACAAATTCCCATAATAAATCCGACTTAAAT CAACGACACTGTGTTTGTTATCCTCATTCCGGAAAAATAAAAGAAGGAGAAGGTGCTTTTATAAGTGATTGTAATCCGGA TATACTGAAGGATCAAAGAATTTGTAGGTTGTATTTACGTGGGACCTGTCGATATGGAAGATTCAAAATCGGCAATGAAC GTTTTTATGTGAACGAAATCAAGGCTCTCGACTACGAAAAACGTCTTCGGGAAGAGAAAGTTCATATTCGTTTAAAAGTC GACTCCGAAGGAAAGGCGATTACGGATTCTCTGATTTGGGAGGACGGATCTTCGCTGTGA
Upstream 100 bases:
>100_bases CAGGATTCGGGCTTATCATTTCCGGACTGCTTATCATAGGACTTACGATCGGATACTTGAAATACAAATCCAAGGTGAGA ATTTTATTGGGAGGTGAAGA
Downstream 100 bases:
>100_bases CCTCGTTTAGACTACAGAAGTCGTTTTCTCCAAAACCGGCATTCATTCCCGCGTCGTAAATCTCGGGAAGATTTTGACAA AGGGAAAGGTTCGTCTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKLLKLILPVTLILPVLFFSWEIVTLEFSKSSGKEVVLPITGYDPRDLLAGHYLRYDILYQSDSICQNPNTNSHNKSDLN QRHCVCYPHSGKIKEGEGAFISDCNPDILKDQRICRLYLRGTCRYGRFKIGNERFYVNEIKALDYEKRLREEKVHIRLKV DSEGKAITDSLIWEDGSSL
Sequences:
>Translated_179_residues MKLLKLILPVTLILPVLFFSWEIVTLEFSKSSGKEVVLPITGYDPRDLLAGHYLRYDILYQSDSICQNPNTNSHNKSDLN QRHCVCYPHSGKIKEGEGAFISDCNPDILKDQRICRLYLRGTCRYGRFKIGNERFYVNEIKALDYEKRLREEKVHIRLKV DSEGKAITDSLIWEDGSSL >Mature_179_residues MKLLKLILPVTLILPVLFFSWEIVTLEFSKSSGKEVVLPITGYDPRDLLAGHYLRYDILYQSDSICQNPNTNSHNKSDLN QRHCVCYPHSGKIKEGEGAFISDCNPDILKDQRICRLYLRGTCRYGRFKIGNERFYVNEIKALDYEKRLREEKVHIRLKV DSEGKAITDSLIWEDGSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20699; Mature: 20699
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKLILPVTLILPVLFFSWEIVTLEFSKSSGKEVVLPITGYDPRDLLAGHYLRYDILY CHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCEEEEEECCCCHHHHHHCCEEEEEEEE QSDSICQNPNTNSHNKSDLNQRHCVCYPHSGKIKEGEGAFISDCNPDILKDQRICRLYLR CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCEECCCCCCHHHHHHHHHHEEC GTCRYGRFKIGNERFYVNEIKALDYEKRLREEKVHIRLKVDSEGKAITDSLIWEDGSSL CCCCCCCEEECCCEEEEEHHHHCCHHHHHCCCEEEEEEEECCCCCEEEHHEEECCCCCC >Mature Secondary Structure MKLLKLILPVTLILPVLFFSWEIVTLEFSKSSGKEVVLPITGYDPRDLLAGHYLRYDILY CHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCEEEEEECCCCHHHHHHCCEEEEEEEE QSDSICQNPNTNSHNKSDLNQRHCVCYPHSGKIKEGEGAFISDCNPDILKDQRICRLYLR CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCEECCCCCCHHHHHHHHHHEEC GTCRYGRFKIGNERFYVNEIKALDYEKRLREEKVHIRLKVDSEGKAITDSLIWEDGSSL CCCCCCCEEECCCEEEEEHHHHCCHHHHHCCCEEEEEEEECCCCCEEEHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA