Click here to switch to the map view.

The map label for this gene is 116328033

Identifier: 116328033

GI number: 116328033

Start: 1562140

End: 1562781

Strand: Direct

Name: 116328033

Synonym: LBL_1328

Alternate gene names: NA

Gene position: 1562140-1562781 (Clockwise)

Preceding gene: 116328032

Following gene: 116328034

Centisome position: 43.22

GC content: 43.61

Gene sequence:

>642_bases
ATGGATATCAAATACGGCGTTTTTTTAAGTACGATCGTGTTTTGTGGTCTATTCTCGTTTTTGAATATTTCTGTCTTTGC
ACAAAATTCGGATTGGAAGGAATATTCACTCAGAGAATTGGTAGGGCGACTCAAGTATTACACGTATGCGAAGGTCGCGC
AGAGTTTAAAAAAAGAATACACGATCGATCAAGAGCAGGTGTGGGAAGACGGAGATTGTACGATTCCCGTTCCTCCACTT
CCCGGTCCTTTTTTCTGCGGGCTCTTAAAACAGCAGGCTCCTTCCGAGTCTCAAAAGTTGCCTGAAACGATGTCCTCTTC
TCCAATCTCCGAAAAACTCCCTACATCCGCCTCCGAAACTCTTTCTCGCGGATTCAATCCGAGTTTGAAAGTATATAAGA
ATATTCAATTGTACTCCGGAACCACGATTTCCGGAAAAAACGTGGTGAAAATCGATTCGGAAGAAAATCCGGGAGAATTT
TTACGCGCATTTTATCTAAACACCGGGCAACTCAGTCATTACGAGTTTCAGGACAGGATTCTCATTTTTGACTGGGTTGG
CTCCAAATTGAACGCGATTTTGGAAGTGAAAACCGATCCGATCCGCAGACCGCTTGGCGGAAGAGAAATTTCGTTTCCAT
GA

Upstream 100 bases:

>100_bases
GCGGTCGACTCCGGAAAAAGCTACGACCAATATTCGAAATATTTAAATTCTGCCGAGAAAGAATACAATGAGAAGATCAA
GAAGTATTATCTTTATTAAG

Downstream 100 bases:

>100_bases
AACAAATCGCTTCCGGTTTTTTGAGGATGATGGATCATCAGGGGATCGATCCTGTTCGGTATATCTGGGTCACGGCGACG
TACGATTTGGATTCTTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDIKYGVFLSTIVFCGLFSFLNISVFAQNSDWKEYSLRELVGRLKYYTYAKVAQSLKKEYTIDQEQVWEDGDCTIPVPPL
PGPFFCGLLKQQAPSESQKLPETMSSSPISEKLPTSASETLSRGFNPSLKVYKNIQLYSGTTISGKNVVKIDSEENPGEF
LRAFYLNTGQLSHYEFQDRILIFDWVGSKLNAILEVKTDPIRRPLGGREISFP

Sequences:

>Translated_213_residues
MDIKYGVFLSTIVFCGLFSFLNISVFAQNSDWKEYSLRELVGRLKYYTYAKVAQSLKKEYTIDQEQVWEDGDCTIPVPPL
PGPFFCGLLKQQAPSESQKLPETMSSSPISEKLPTSASETLSRGFNPSLKVYKNIQLYSGTTISGKNVVKIDSEENPGEF
LRAFYLNTGQLSHYEFQDRILIFDWVGSKLNAILEVKTDPIRRPLGGREISFP
>Mature_213_residues
MDIKYGVFLSTIVFCGLFSFLNISVFAQNSDWKEYSLRELVGRLKYYTYAKVAQSLKKEYTIDQEQVWEDGDCTIPVPPL
PGPFFCGLLKQQAPSESQKLPETMSSSPISEKLPTSASETLSRGFNPSLKVYKNIQLYSGTTISGKNVVKIDSEENPGEF
LRAFYLNTGQLSHYEFQDRILIFDWVGSKLNAILEVKTDPIRRPLGGREISFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24117; Mature: 24117

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKYGVFLSTIVFCGLFSFLNISVFAQNSDWKEYSLRELVGRLKYYTYAKVAQSLKKEY
CCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TIDQEQVWEDGDCTIPVPPLPGPFFCGLLKQQAPSESQKLPETMSSSPISEKLPTSASET
CCCHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHCCHHHCCCCCHHHCCCCHHHH
LSRGFNPSLKVYKNIQLYSGTTISGKNVVKIDSEENPGEFLRAFYLNTGQLSHYEFQDRI
HHCCCCCCEEEEEEEEEECCCEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCE
LIFDWVGSKLNAILEVKTDPIRRPLGGREISFP
EEEEECCCHHHEEEEECCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MDIKYGVFLSTIVFCGLFSFLNISVFAQNSDWKEYSLRELVGRLKYYTYAKVAQSLKKEY
CCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TIDQEQVWEDGDCTIPVPPLPGPFFCGLLKQQAPSESQKLPETMSSSPISEKLPTSASET
CCCHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHCCHHHCCCCCHHHCCCCHHHH
LSRGFNPSLKVYKNIQLYSGTTISGKNVVKIDSEENPGEFLRAFYLNTGQLSHYEFQDRI
HHCCCCCCEEEEEEEEEECCCEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCE
LIFDWVGSKLNAILEVKTDPIRRPLGGREISFP
EEEEECCCHHHEEEEECCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA