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The map label for this gene is ybbC [H]

Identifier: 116328032

GI number: 116328032

Start: 1560876

End: 1562138

Strand: Direct

Name: ybbC [H]

Synonym: LBL_1327

Alternate gene names: 116328032

Gene position: 1560876-1562138 (Clockwise)

Preceding gene: 116328030

Following gene: 116328033

Centisome position: 43.18

GC content: 38.56

Gene sequence:

>1263_bases
ATGCTCAACACAAAAATAAATAAAAAATTCTTTCTTTCGGTTATTTTTTTTCTTTTGTTCCCTTCGATTGCGTGTGCGGA
AAAAAGTTTTCGCAAACATATCTCGGATTCGAAATACGTTCCTTCCGAAATCGAATTTTATACCAATGTTCTTCCCGGCC
TTTCCGGAAAGAACGTGATTCTAATCACAAATCCATCCGGAATCGGCAGAAGTCCCGAAAGAATTCTGAGAGAGTTTAAA
AAGCATAACGTAAAAATCAAACATCTGATCGGGCTCGAACACGGATTTTTGGGGTTGGAAGAAGATTTCAGCAAATCTCC
GGTTACAGTGGATGAATTTTTCAATCTTCCGATCTATCATATCTATCGGGTGAAAAATGCGGAACTTCCCGCGATTTTGA
AAGGCACTGATGTGATTCTTTTCGACGTTCAAGATATGGGAATGAGATGTTATACTTACTTAACGGTTTTAAAAAGAATC
ATGGATGGAATTCCAGATTCGAAGAATACAAAATTGATCGTTTTGGATCATGTCAACCCCGCTCTTTATTTAAAAGGAAG
GGGAGAGATGATTGATAAAAGATTTCTTAACTTTGCGGGAGAATTTCCTTCCCTTTTCTTCGGAGGTTTAACTTTAGGAG
AGTCGGCCGCTTATTACAACGCGGAATACTTGGAAAATAGAATTCAGTTGGAAATCATATCGCCTAAAAACGCAAAACGT
TCTTTCGATTGGGATAAGGAAGGAATTCCTTGGATTACACCTTCTCCGAATTTGCCGACGGTAGATTCCGCGATCAATTA
TCTAGGGCTCGTTTTATTGGAAGGAGTGAATGTTTCTGTGGGAAGAGGAACGACGGCTCCTTTCGTATATTTCGGAGCGC
CTTGGATGATCGAACCTGAAAAATTAGCGGAAGAATTGAATCAAAACTCCGGAGGAGACTATTATTATCAAACCGTATTC
TTCAAACCGGTATTCGGTCCGTATAAAAATGAGATCTGTAGGGGATTGCGACTAACGGTTGTGAATCGAAAATACGATCC
TCTCAAAATGGTGTTTCAATTGATCGTCGTCTTAAAATCGAATTATAAAGAATTTAAATGGAGATCGTATCCGGATGGAA
CTTATAATATCGATTTCCTTTGGGGAACGGAATCCTTTCGAAAAGCGGTCGACTCCGGAAAAAGCTACGACCAATATTCG
AAATATTTAAATTCTGCCGAGAAAGAATACAATGAGAAGATCAAGAAGTATTATCTTTATTAA

Upstream 100 bases:

>100_bases
AGATAAGCCTGGTAGTAAGGAAACGATTCATTTGTCGTTTTTCTCCTTGAAGAATAAGGTTTGAGAAATTTTCTTAAACA
GAATAGGAAGGAAGTCTCAG

Downstream 100 bases:

>100_bases
GATGGATATCAAATACGGCGTTTTTTTAAGTACGATCGTGTTTTGTGGTCTATTCTCGTTTTTGAATATTTCTGTCTTTG
CACAAAATTCGGATTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLNTKINKKFFLSVIFFLLFPSIACAEKSFRKHISDSKYVPSEIEFYTNVLPGLSGKNVILITNPSGIGRSPERILREFK
KHNVKIKHLIGLEHGFLGLEEDFSKSPVTVDEFFNLPIYHIYRVKNAELPAILKGTDVILFDVQDMGMRCYTYLTVLKRI
MDGIPDSKNTKLIVLDHVNPALYLKGRGEMIDKRFLNFAGEFPSLFFGGLTLGESAAYYNAEYLENRIQLEIISPKNAKR
SFDWDKEGIPWITPSPNLPTVDSAINYLGLVLLEGVNVSVGRGTTAPFVYFGAPWMIEPEKLAEELNQNSGGDYYYQTVF
FKPVFGPYKNEICRGLRLTVVNRKYDPLKMVFQLIVVLKSNYKEFKWRSYPDGTYNIDFLWGTESFRKAVDSGKSYDQYS
KYLNSAEKEYNEKIKKYYLY

Sequences:

>Translated_420_residues
MLNTKINKKFFLSVIFFLLFPSIACAEKSFRKHISDSKYVPSEIEFYTNVLPGLSGKNVILITNPSGIGRSPERILREFK
KHNVKIKHLIGLEHGFLGLEEDFSKSPVTVDEFFNLPIYHIYRVKNAELPAILKGTDVILFDVQDMGMRCYTYLTVLKRI
MDGIPDSKNTKLIVLDHVNPALYLKGRGEMIDKRFLNFAGEFPSLFFGGLTLGESAAYYNAEYLENRIQLEIISPKNAKR
SFDWDKEGIPWITPSPNLPTVDSAINYLGLVLLEGVNVSVGRGTTAPFVYFGAPWMIEPEKLAEELNQNSGGDYYYQTVF
FKPVFGPYKNEICRGLRLTVVNRKYDPLKMVFQLIVVLKSNYKEFKWRSYPDGTYNIDFLWGTESFRKAVDSGKSYDQYS
KYLNSAEKEYNEKIKKYYLY
>Mature_420_residues
MLNTKINKKFFLSVIFFLLFPSIACAEKSFRKHISDSKYVPSEIEFYTNVLPGLSGKNVILITNPSGIGRSPERILREFK
KHNVKIKHLIGLEHGFLGLEEDFSKSPVTVDEFFNLPIYHIYRVKNAELPAILKGTDVILFDVQDMGMRCYTYLTVLKRI
MDGIPDSKNTKLIVLDHVNPALYLKGRGEMIDKRFLNFAGEFPSLFFGGLTLGESAAYYNAEYLENRIQLEIISPKNAKR
SFDWDKEGIPWITPSPNLPTVDSAINYLGLVLLEGVNVSVGRGTTAPFVYFGAPWMIEPEKLAEELNQNSGGDYYYQTVF
FKPVFGPYKNEICRGLRLTVVNRKYDPLKMVFQLIVVLKSNYKEFKWRSYPDGTYNIDFLWGTESFRKAVDSGKSYDQYS
KYLNSAEKEYNEKIKKYYLY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 48380; Mature: 48380

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTKINKKFFLSVIFFLLFPSIACAEKSFRKHISDSKYVPSEIEFYTNVLPGLSGKNVI
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEE
LITNPSGIGRSPERILREFKKHNVKIKHLIGLEHGFLGLEEDFSKSPVTVDEFFNLPIYH
EEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEE
IYRVKNAELPAILKGTDVILFDVQDMGMRCYTYLTVLKRIMDGIPDSKNTKLIVLDHVNP
EEEECCCCCCEEECCCEEEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
ALYLKGRGEMIDKRFLNFAGEFPSLFFGGLTLGESAAYYNAEYLENRIQLEIISPKNAKR
EEEECCCCHHHHHHHHHHCCCCHHHHHCCEEECCCCHHCCHHHHCCEEEEEEECCCCCCC
SFDWDKEGIPWITPSPNLPTVDSAINYLGLVLLEGVNVSVGRGTTAPFVYFGAPWMIEPE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCEECHH
KLAEELNQNSGGDYYYQTVFFKPVFGPYKNEICRGLRLTVVNRKYDPLKMVFQLIVVLKS
HHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHC
NYKEFKWRSYPDGTYNIDFLWGTESFRKAVDSGKSYDQYSKYLNSAEKEYNEKIKKYYLY
CHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNTKINKKFFLSVIFFLLFPSIACAEKSFRKHISDSKYVPSEIEFYTNVLPGLSGKNVI
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEE
LITNPSGIGRSPERILREFKKHNVKIKHLIGLEHGFLGLEEDFSKSPVTVDEFFNLPIYH
EEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEE
IYRVKNAELPAILKGTDVILFDVQDMGMRCYTYLTVLKRIMDGIPDSKNTKLIVLDHVNP
EEEECCCCCCEEECCCEEEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
ALYLKGRGEMIDKRFLNFAGEFPSLFFGGLTLGESAAYYNAEYLENRIQLEIISPKNAKR
EEEECCCCHHHHHHHHHHCCCCHHHHHCCEEECCCCHHCCHHHHCCEEEEEEECCCCCCC
SFDWDKEGIPWITPSPNLPTVDSAINYLGLVLLEGVNVSVGRGTTAPFVYFGAPWMIEPE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCEECHH
KLAEELNQNSGGDYYYQTVFFKPVFGPYKNEICRGLRLTVVNRKYDPLKMVFQLIVVLKS
HHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHC
NYKEFKWRSYPDGTYNIDFLWGTESFRKAVDSGKSYDQYSKYLNSAEKEYNEKIKKYYLY
CHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]