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The map label for this gene is 116327878

Identifier: 116327878

GI number: 116327878

Start: 1372877

End: 1374295

Strand: Reverse

Name: 116327878

Synonym: LBL_1162

Alternate gene names: NA

Gene position: 1374295-1372877 (Counterclockwise)

Preceding gene: 116327879

Following gene: 116327877

Centisome position: 38.02

GC content: 39.32

Gene sequence:

>1419_bases
ATGAAACGATTTTACATTTTTTTACTTACATTCTTTCAAATGTGCACACCCGCCAAAATAGTAGGCGTGCCCGCCCCCGA
ACCAAATAACTATTGGATACAATTCCTAATTCAAAAGAAAATCGAAGAGATTATTGGCAATGACAATTTATCCGAACTAT
CAACCCCTCAAGATTCGGACAAATTAACATTAAAACATACCTTGCTACTTGGAGCGCCTAACGCAGACACTTCCGGTAAA
AGTTTGATTGTGGACGAAAAAGGTTTTATCTACATCACAGGAGATACGAACGGAAGCGTTTACAGAGCGGCAAATTCCAT
CGGGGCTAGAGATCTCATTTTCGGAAAATATGATTCTCAAATGAATCCAATTTGGACTTATCAAATTGGGAATGCGAGAG
TAAGATTAAAGGTGGAAGATATTGCAGTCGATTCGAACGAAAACACGTATATAACCGGTAGTACAAAAGAACTTTTTCGA
GGCGTGAAACAAGAAGGTGAGGATGATTTGTTTCTAATTAAATTCGATTCCAATGGAAATGAACTTTGGTCTCTGCAAGA
TGGCATTCCAAATCATTCTATTTTACCCTCCAAAATTGCGTTAGATCCGTCGGGAAACATTTATATAACCGGAAGATCGA
CCGGACCTTTCGGCGGCCCTCTCAGTGGATCCAACGGATTTATCGCCAAGTTTGATGACAAGGGAAATAGGAATTGGGTC
AAACAAATCGCGATCCCTAATACAAGGAGTTTTCCGGAAGGGCTGGTAATTAACAAAACCACGAGTGACATTTATATCAC
CGGTTCTGGGAACGCAGACTATAAAAAAAACACCGCGCCGGGAACCGGAATTGATGATCTTTTTATACTTAAATACGACA
ATAACGGTAATCGTCAATTTTTCGCTCAATTAGGTTCTTTTGGAAAATCCTTTCATAGTAAATCCGTAACTGTGGATTTA
TCCGGAAATGTTATTGTAAGCGGAACGAGTAACGGTCGTTTTAATGATCAATTAACTGGAACGAGTTGGCTTGGAACCAT
AGTAAAATATGATTCATTCGGCAACTTACAATGGGTTCAACAATTCGGTCCCGATAGCGCTCCTCCAGAACAAGCGGTGA
TCCTTTCTATCATAACCGATATACATGGAAACATTTTTACTACGGGTTATACAAATGGAAATATCTTAAACGGAACAGAT
AATTCTTTAGGAGTTCAAGACGCATTTATTACAAAACACAATTCATCCGGACAAATTAAATGGATGCAACAAATTGGTAT
CCCCGATGCAACCATTTCCGGAAATGGGCTCGGACTTGATTCAAAAGGAAATCTCTACGTTATCGGAAACACAAACAGAG
GAATCAACGGAACCCCAATCGTTGGAGCGAATGACGTGTTCCTTATAAAATATGAATAA

Upstream 100 bases:

>100_bases
CTGTAGGAACTCCCACATTCAAAAGACTGGTGACAGTGTCGCAGCAATGCCGCTCCCACAGAAGACAGTTTTGAGACCGG
ATCTAAAGCTTGAAAAAATT

Downstream 100 bases:

>100_bases
TTATTTTTTTCTTACTGGAAAAACCTTACAATAAAACACTCATATACCACTCAGACAATTGTACTAAAAATGAATAGTCG
ACTTTACGGAGGTGAGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MKRFYIFLLTFFQMCTPAKIVGVPAPEPNNYWIQFLIQKKIEEIIGNDNLSELSTPQDSDKLTLKHTLLLGAPNADTSGK
SLIVDEKGFIYITGDTNGSVYRAANSIGARDLIFGKYDSQMNPIWTYQIGNARVRLKVEDIAVDSNENTYITGSTKELFR
GVKQEGEDDLFLIKFDSNGNELWSLQDGIPNHSILPSKIALDPSGNIYITGRSTGPFGGPLSGSNGFIAKFDDKGNRNWV
KQIAIPNTRSFPEGLVINKTTSDIYITGSGNADYKKNTAPGTGIDDLFILKYDNNGNRQFFAQLGSFGKSFHSKSVTVDL
SGNVIVSGTSNGRFNDQLTGTSWLGTIVKYDSFGNLQWVQQFGPDSAPPEQAVILSIITDIHGNIFTTGYTNGNILNGTD
NSLGVQDAFITKHNSSGQIKWMQQIGIPDATISGNGLGLDSKGNLYVIGNTNRGINGTPIVGANDVFLIKYE

Sequences:

>Translated_472_residues
MKRFYIFLLTFFQMCTPAKIVGVPAPEPNNYWIQFLIQKKIEEIIGNDNLSELSTPQDSDKLTLKHTLLLGAPNADTSGK
SLIVDEKGFIYITGDTNGSVYRAANSIGARDLIFGKYDSQMNPIWTYQIGNARVRLKVEDIAVDSNENTYITGSTKELFR
GVKQEGEDDLFLIKFDSNGNELWSLQDGIPNHSILPSKIALDPSGNIYITGRSTGPFGGPLSGSNGFIAKFDDKGNRNWV
KQIAIPNTRSFPEGLVINKTTSDIYITGSGNADYKKNTAPGTGIDDLFILKYDNNGNRQFFAQLGSFGKSFHSKSVTVDL
SGNVIVSGTSNGRFNDQLTGTSWLGTIVKYDSFGNLQWVQQFGPDSAPPEQAVILSIITDIHGNIFTTGYTNGNILNGTD
NSLGVQDAFITKHNSSGQIKWMQQIGIPDATISGNGLGLDSKGNLYVIGNTNRGINGTPIVGANDVFLIKYE
>Mature_472_residues
MKRFYIFLLTFFQMCTPAKIVGVPAPEPNNYWIQFLIQKKIEEIIGNDNLSELSTPQDSDKLTLKHTLLLGAPNADTSGK
SLIVDEKGFIYITGDTNGSVYRAANSIGARDLIFGKYDSQMNPIWTYQIGNARVRLKVEDIAVDSNENTYITGSTKELFR
GVKQEGEDDLFLIKFDSNGNELWSLQDGIPNHSILPSKIALDPSGNIYITGRSTGPFGGPLSGSNGFIAKFDDKGNRNWV
KQIAIPNTRSFPEGLVINKTTSDIYITGSGNADYKKNTAPGTGIDDLFILKYDNNGNRQFFAQLGSFGKSFHSKSVTVDL
SGNVIVSGTSNGRFNDQLTGTSWLGTIVKYDSFGNLQWVQQFGPDSAPPEQAVILSIITDIHGNIFTTGYTNGNILNGTD
NSLGVQDAFITKHNSSGQIKWMQQIGIPDATISGNGLGLDSKGNLYVIGNTNRGINGTPIVGANDVFLIKYE

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51478; Mature: 51478

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFYIFLLTFFQMCTPAKIVGVPAPEPNNYWIQFLIQKKIEEIIGNDNLSELSTPQDSD
CCEEEEEHHHHHHHCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCCCCCCC
KLTLKHTLLLGAPNADTSGKSLIVDEKGFIYITGDTNGSVYRAANSIGARDLIFGKYDSQ
CEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEECCCCC
MNPIWTYQIGNARVRLKVEDIAVDSNENTYITGSTKELFRGVKQEGEDDLFLIKFDSNGN
CCCEEEEEECCEEEEEEEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCC
ELWSLQDGIPNHSILPSKIALDPSGNIYITGRSTGPFGGPLSGSNGFIAKFDDKGNRNWV
EEEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEE
KQIAIPNTRSFPEGLVINKTTSDIYITGSGNADYKKNTAPGTGIDDLFILKYDNNGNRQF
EEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH
FAQLGSFGKSFHSKSVTVDLSGNVIVSGTSNGRFNDQLTGTSWLGTIVKYDSFGNLQWVQ
HHHHHHHHHHHCCCEEEEEECCCEEEECCCCCEECCCCCCCHHEEEEEEECCCCCCHHHH
QFGPDSAPPEQAVILSIITDIHGNIFTTGYTNGNILNGTDNSLGVQDAFITKHNSSGQIK
HHCCCCCCCCHHEEEEEHHHCCCCEEEEECCCCCEECCCCCCCCCEEEEEEECCCCCCEE
WMQQIGIPDATISGNGLGLDSKGNLYVIGNTNRGINGTPIVGANDVFLIKYE
EEECCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCEEEEEEC
>Mature Secondary Structure
MKRFYIFLLTFFQMCTPAKIVGVPAPEPNNYWIQFLIQKKIEEIIGNDNLSELSTPQDSD
CCEEEEEHHHHHHHCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCCCCCCC
KLTLKHTLLLGAPNADTSGKSLIVDEKGFIYITGDTNGSVYRAANSIGARDLIFGKYDSQ
CEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEECCCCC
MNPIWTYQIGNARVRLKVEDIAVDSNENTYITGSTKELFRGVKQEGEDDLFLIKFDSNGN
CCCEEEEEECCEEEEEEEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCC
ELWSLQDGIPNHSILPSKIALDPSGNIYITGRSTGPFGGPLSGSNGFIAKFDDKGNRNWV
EEEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEE
KQIAIPNTRSFPEGLVINKTTSDIYITGSGNADYKKNTAPGTGIDDLFILKYDNNGNRQF
EEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH
FAQLGSFGKSFHSKSVTVDLSGNVIVSGTSNGRFNDQLTGTSWLGTIVKYDSFGNLQWVQ
HHHHHHHHHHHCCCEEEEEECCCEEEECCCCCEECCCCCCCHHEEEEEEECCCCCCHHHH
QFGPDSAPPEQAVILSIITDIHGNIFTTGYTNGNILNGTDNSLGVQDAFITKHNSSGQIK
HHCCCCCCCCHHEEEEEHHHCCCCEEEEECCCCCEECCCCCCCCCEEEEEEECCCCCCEE
WMQQIGIPDATISGNGLGLDSKGNLYVIGNTNRGINGTPIVGANDVFLIKYE
EEECCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA