Click here to switch to the map view.

The map label for this gene is ibpA-1 [H]

Identifier: 116327877

GI number: 116327877

Start: 1372055

End: 1372450

Strand: Reverse

Name: ibpA-1 [H]

Synonym: LBL_1161

Alternate gene names: 116327877

Gene position: 1372450-1372055 (Counterclockwise)

Preceding gene: 116327878

Following gene: 116327876

Centisome position: 37.97

GC content: 42.42

Gene sequence:

>396_bases
ATGAATGAATTTAGAATCCTTGAAGATCTCCAAAACCAGTTTTCCAGCCTTTGGAACCCGTTCTTACTCCACGGCGGTAG
CGCCTACCCAGCTTTGAATATCCACAAAGGAATCGATGTGGTGACGATTACCGCTCTTATACCAGGAATTGAGCCGGAAA
ATTTGGAAATTACCATGAGTGGAAATCACCTACACCTAAATGGGGAAATTCCAAAATCCACCCAAGGGATAAATCGCGCG
GAAAGATTCCATGGAAAATTCCATAGAACACTGGAACTTCCTACGGAAGTCGATTCGGAAAAAGCAAATGCGGAATTTAA
AAACGGTATTTTAGTTCTCACACTTCCCGTTCGGGAAAGCGTGAAACCTCGCAAAATCCAAATTCAAACTAAGTAA

Upstream 100 bases:

>100_bases
CTTAATAAAAAAGATTGCTAATTTTTTTTAAAAAATGCTGGAACTTTTTTAACATTTTAGCACTCTAAGTTTTAGATTGC
CAAAAGAGGTATCAAAAACC

Downstream 100 bases:

>100_bases
TTTTTTAGGAGAATCACATATGACAAACGCAGTTCTAAATCAAGAAAACCGTACCGAGGGTCACTCTCCTCAGGAAGCCA
AAAAAGAGAGAGTAAAAATT

Product: small heat shock protein (molecular chaperone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNEFRILEDLQNQFSSLWNPFLLHGGSAYPALNIHKGIDVVTITALIPGIEPENLEITMSGNHLHLNGEIPKSTQGINRA
ERFHGKFHRTLELPTEVDSEKANAEFKNGILVLTLPVRESVKPRKIQIQTK

Sequences:

>Translated_131_residues
MNEFRILEDLQNQFSSLWNPFLLHGGSAYPALNIHKGIDVVTITALIPGIEPENLEITMSGNHLHLNGEIPKSTQGINRA
ERFHGKFHRTLELPTEVDSEKANAEFKNGILVLTLPVRESVKPRKIQIQTK
>Mature_131_residues
MNEFRILEDLQNQFSSLWNPFLLHGGSAYPALNIHKGIDVVTITALIPGIEPENLEITMSGNHLHLNGEIPKSTQGINRA
ERFHGKFHRTLELPTEVDSEKANAEFKNGILVLTLPVRESVKPRKIQIQTK

Specific function: May stabilize cellular components during stress and spore formation [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 14760; Mature: 14760

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFRILEDLQNQFSSLWNPFLLHGGSAYPALNIHKGIDVVTITALIPGIEPENLEITMS
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEC
GNHLHLNGEIPKSTQGINRAERFHGKFHRTLELPTEVDSEKANAEFKNGILVLTLPVRES
CCEEEECCCCCCCCCCCCHHHHHHCHHEEEEECCCCCCCCCCCCHHHCCEEEEEECCCCC
VKPRKIQIQTK
CCCCEEEEEEC
>Mature Secondary Structure
MNEFRILEDLQNQFSSLWNPFLLHGGSAYPALNIHKGIDVVTITALIPGIEPENLEITMS
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEC
GNHLHLNGEIPKSTQGINRAERFHGKFHRTLELPTEVDSEKANAEFKNGILVLTLPVRES
CCEEEECCCCCCCCCCCCHHHHHHCHHEEEEECCCCCCCCCCCCHHHCCEEEEEECCCCC
VKPRKIQIQTK
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226695; 8423161 [H]