| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327815
Identifier: 116327815
GI number: 116327815
Start: 1273086
End: 1273604
Strand: Reverse
Name: 116327815
Synonym: LBL_1083
Alternate gene names: NA
Gene position: 1273604-1273086 (Counterclockwise)
Preceding gene: 116327817
Following gene: 116327814
Centisome position: 35.24
GC content: 41.43
Gene sequence:
>519_bases ATGACCCGAACAAACTACCCAAACCCCTCCTTAGAAACCCTGAATCTCGAATTTGAAAAAGAAATCTATTGGAACCGATT TTTGGAAAGAGCCGGTTTTATCGTAGGTTACGGAGCCTATGTGATTTGTTTCGTGATCGTATTCGGCCTGAAGTTGGAAG CCGTAAAATACGCTTCTCTTTTTTATCTGGGGCTTTTCACCCGACTTTCCAGTCTTTTAATCGGAAAGTTTTACGAAATT CCGGTCGTATTTCGAAATCTTTTTTCCGAAAATAAAACGTTAGTCGCGGTCAGTCGGGACTACATCCGGACTCACAGAGA AAAGGTACTCAAACGTCTCGCCGCTAATTTGTTCGGGATGAATGACTCCTCTTCCCTTTATCAAGCCAACGAAGAAGAGC TCGTGGAAATTATCCGTCCCAAAATGCAAAAACCTTGGAAAAAAGCGGGAAAAATCTATTTCTTTTTTGTTTATATCCCG GTCGTATTCATTTTAATCGGCATCTCTCTTTGGACTTGA
Upstream 100 bases:
>100_bases GTCTTTTTAATGAGAAATTCGAACACGATTTGATTTGTCATTTCGTAGAGGAAATTTTGTATGGATCGAGAAGAGAATAT TCTTTTTTTTGAATCCATCA
Downstream 100 bases:
>100_bases TTCACTCAATTTCAAGTGAAAAGTATCGTCATATCCATCCTCTACGCTCTTTGGCTTTGTTCCTGTAAGAATACCTCTTC CTCAAAATCTTTTTCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTRTNYPNPSLETLNLEFEKEIYWNRFLERAGFIVGYGAYVICFVIVFGLKLEAVKYASLFYLGLFTRLSSLLIGKFYEI PVVFRNLFSENKTLVAVSRDYIRTHREKVLKRLAANLFGMNDSSSLYQANEEELVEIIRPKMQKPWKKAGKIYFFFVYIP VVFILIGISLWT
Sequences:
>Translated_172_residues MTRTNYPNPSLETLNLEFEKEIYWNRFLERAGFIVGYGAYVICFVIVFGLKLEAVKYASLFYLGLFTRLSSLLIGKFYEI PVVFRNLFSENKTLVAVSRDYIRTHREKVLKRLAANLFGMNDSSSLYQANEEELVEIIRPKMQKPWKKAGKIYFFFVYIP VVFILIGISLWT >Mature_171_residues TRTNYPNPSLETLNLEFEKEIYWNRFLERAGFIVGYGAYVICFVIVFGLKLEAVKYASLFYLGLFTRLSSLLIGKFYEIP VVFRNLFSENKTLVAVSRDYIRTHREKVLKRLAANLFGMNDSSSLYQANEEELVEIIRPKMQKPWKKAGKIYFFFVYIPV VFILIGISLWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20168; Mature: 20037
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTNYPNPSLETLNLEFEKEIYWNRFLERAGFIVGYGAYVICFVIVFGLKLEAVKYASL CCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH FYLGLFTRLSSLLIGKFYEIPVVFRNLFSENKTLVAVSRDYIRTHREKVLKRLAANLFGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC NDSSSLYQANEEELVEIIRPKMQKPWKKAGKIYFFFVYIPVVFILIGISLWT CCCCHHHHCCHHHHHHHHHHHHCCCHHHHCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRTNYPNPSLETLNLEFEKEIYWNRFLERAGFIVGYGAYVICFVIVFGLKLEAVKYASL CCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH FYLGLFTRLSSLLIGKFYEIPVVFRNLFSENKTLVAVSRDYIRTHREKVLKRLAANLFGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC NDSSSLYQANEEELVEIIRPKMQKPWKKAGKIYFFFVYIPVVFILIGISLWT CCCCHHHHCCHHHHHHHHHHHHCCCHHHHCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA