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The map label for this gene is fadF [H]

Identifier: 116327777

GI number: 116327777

Start: 1208393

End: 1210480

Strand: Reverse

Name: fadF [H]

Synonym: LBL_1035

Alternate gene names: 116327777

Gene position: 1210480-1208393 (Counterclockwise)

Preceding gene: 116327781

Following gene: 116327773

Centisome position: 33.49

GC content: 45.64

Gene sequence:

>2088_bases
ATGGCAATTTCACAAATCGCCTTTCATCTGATTTTCACAGTCCTATTCGTAATCGCGAATGTAGTTTTTATCCGTGCAAT
CCTCTATCGTCTGAGGTTAATTTTTAACGCGAGAAAAGCCGCGGGAACGGAAAACTTTTTGGAAAACCCGAACTGGATTT
TCCGAATCAACAGCTTTATTCAGAACGTAATTCTCCAAAAAAAGAACTTCAAAGAACCTCTTCGAGGAATCATGCACGCG
TTCATCTTTTACGGTTTCGTAACGTATTTACTTCACACTACAAGCCAAATGATCGCAGGCATGTTCGGATACGGAATGGA
GGACCCTTATAAATTCTCCCTGATCGGCTTCTTATTCGGAGAAAGCACAGGACATCTCTACGAATCCGTCGTTCAAGTCG
TTTCCATCCTCGTTTTAATCGGTCTCGGATTTTTCGCTTGGAGGAGATGGATTCAAAAAGCGAAAGGACTGGACGTTCAT
TCTCCCGCTTCCGCGATCGTAATCGGAATGATTTCTCTTTTGATGATCTCCACTCTTTTAGGAGAAGGAGCCAAAGCCGT
CGGAGCAGTTTATGATAGTCCGACCGAAAACGCTTCTTTGATCGCAGCGGGGATCGGCGCGATTTGGAAATCGATCGGCG
TAGAATATTCCACTGCGGACGTAGTCGTTCAAATTATGTGGTGGGTTCATATTCTTTCCGTGTTTTCTTTTATGCTTTAC
GTTCCCACTTCCAAACACGCACACCTAATCTTCGCTCCGTTCAACTATTTTCTCCAATCCGATACTCCGAAAGGAGCTCT
TTCTAAACTTAATTTAGAAGATGAGAATGTAGTCTGGGGTGTGAACCGTGTAGAAGACTTTCCCTGGCCGAATCTTCTGG
ACGGAATGTCTTGTATCGAATGTGGTCGTTGTCAAGTTCAATGTCCCGCTAATAGAACCGGAAAAGTTCTGAACCCGAAA
GCAATCATCGCAGATCTCAAACACGCGCTTTTGGACAAGATGCCGGAAGTTGCAAAAATCAGAGCCGAAGAAACCGATGC
GACTATTGCGGCTGAAAAAATCGCCGCTTTGGATACGGGAGTGATCAACAACTATGAAGGTCTTTCCGAAGAAGCTCTCT
GGGGTTGCACTACTTGCTACGCTTGTGTGGAAGCCTGTCCAGTCGGAAATAACCAAGTCAATGCGATCATGGAAATGAGA
AGACATTTGGTTCTTGCAGAATCCAAGTTTCCCGTGGAACTCCAGAACGCTTTCGTAAATATGGAAAACAATTCGAATCC
TTGGGGCGTGGGAGCTCATACAAGAGCGGACTGGGCGGAAGGTCTAGGCGTCAAAACCATGGCGGAAGATTCCAACGTAG
ACATTCTCTATTGGGTAGGATGTGCGGGTGCTTTCGACGATAGAAACAAGAGTATCGCTAAATCTTTCGTTAAAATTCTT
CAAAAGGCGGACGTGAAATTCGGAATCCTCGGAACCGAAGAAAACTGCTCCGGCGACTCCGCGAGACGAGGCGGTAACGA
GTATCTTTATCAAACTCTCGCACAAGCGAACGTGGATACGATGAACGGATACAATGTGAAAAAAGTAGTAACTGCTTGTC
CCCATTGTTACAACACAATTAAAAACGAATATCCTCAGTTCGGTGGAAATTTCGAAGTGGTTCACCACTCCGAATTCATT
AACGATCTCGTGAAAGAGAAAAAACTCGACGTGAAAACTGCGGAAGACGCTTCTTCCGGTAAATACACGTATCACGATTC
CTGCTACATCGGACGTTACAACGACAACTACGAAAATCCGAGAGACGTGGTGAAAAAAGTTTCCGGCGGTAAACTCGCGG
AACCTTCCGATCACCATACGAAAGGTCTCTGCTGCGGCGCAGGCGGGGCTCAGATGTGGATGGAAGAACAAAACAACGAC
AGAGTGAACATTAAACGAACCAAACAACTTCTCGACACCGGCGCGACCACAATCGCAACCGCTTGTCCTTTCTGCGTAAC
GATGATTACCGACGGTGTAAAACACGAAGGCAAGGTCGAAGAAGTAAAGGTAAAAGATATTGCGGAATTGGTCGCCGACA
ACATCTAA

Upstream 100 bases:

>100_bases
AGCTTCCAACACTCCGTTTTGAAAATTCCTCGACAGGGAGGTTCTCAATTCCTACGCTGTAAATCATTCACCAATCCACA
AGAAAGGGTAACTCATCCAT

Downstream 100 bases:

>100_bases
CAACCAATTCTATTTTAGAATTCCTTAAATTAAAAAAGCCGCAAGCGATTGCGGCTTTTTTGTTTTTCGATCGCCGCCTC
GATTCCCCTCCGAAAAAAAA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 695; Mature: 694

Protein sequence:

>695_residues
MAISQIAFHLIFTVLFVIANVVFIRAILYRLRLIFNARKAAGTENFLENPNWIFRINSFIQNVILQKKNFKEPLRGIMHA
FIFYGFVTYLLHTTSQMIAGMFGYGMEDPYKFSLIGFLFGESTGHLYESVVQVVSILVLIGLGFFAWRRWIQKAKGLDVH
SPASAIVIGMISLLMISTLLGEGAKAVGAVYDSPTENASLIAAGIGAIWKSIGVEYSTADVVVQIMWWVHILSVFSFMLY
VPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRTGKVLNPK
AIIADLKHALLDKMPEVAKIRAEETDATIAAEKIAALDTGVINNYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMR
RHLVLAESKFPVELQNAFVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDILYWVGCAGAFDDRNKSIAKSFVKIL
QKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTIKNEYPQFGGNFEVVHHSEFI
NDLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNND
RVNIKRTKQLLDTGATTIATACPFCVTMITDGVKHEGKVEEVKVKDIAELVADNI

Sequences:

>Translated_695_residues
MAISQIAFHLIFTVLFVIANVVFIRAILYRLRLIFNARKAAGTENFLENPNWIFRINSFIQNVILQKKNFKEPLRGIMHA
FIFYGFVTYLLHTTSQMIAGMFGYGMEDPYKFSLIGFLFGESTGHLYESVVQVVSILVLIGLGFFAWRRWIQKAKGLDVH
SPASAIVIGMISLLMISTLLGEGAKAVGAVYDSPTENASLIAAGIGAIWKSIGVEYSTADVVVQIMWWVHILSVFSFMLY
VPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRTGKVLNPK
AIIADLKHALLDKMPEVAKIRAEETDATIAAEKIAALDTGVINNYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMR
RHLVLAESKFPVELQNAFVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDILYWVGCAGAFDDRNKSIAKSFVKIL
QKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTIKNEYPQFGGNFEVVHHSEFI
NDLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNND
RVNIKRTKQLLDTGATTIATACPFCVTMITDGVKHEGKVEEVKVKDIAELVADNI
>Mature_694_residues
AISQIAFHLIFTVLFVIANVVFIRAILYRLRLIFNARKAAGTENFLENPNWIFRINSFIQNVILQKKNFKEPLRGIMHAF
IFYGFVTYLLHTTSQMIAGMFGYGMEDPYKFSLIGFLFGESTGHLYESVVQVVSILVLIGLGFFAWRRWIQKAKGLDVHS
PASAIVIGMISLLMISTLLGEGAKAVGAVYDSPTENASLIAAGIGAIWKSIGVEYSTADVVVQIMWWVHILSVFSFMLYV
PTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRTGKVLNPKA
IIADLKHALLDKMPEVAKIRAEETDATIAAEKIAALDTGVINNYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMRR
HLVLAESKFPVELQNAFVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDILYWVGCAGAFDDRNKSIAKSFVKILQ
KADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTIKNEYPQFGGNFEVVHHSEFIN
DLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNNDR
VNIKRTKQLLDTGATTIATACPFCVTMITDGVKHEGKVEEVKVKDIAELVADNI

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 77031; Mature: 76900

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISQIAFHLIFTVLFVIANVVFIRAILYRLRLIFNARKAAGTENFLENPNWIFRINSFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEHHHHH
QNVILQKKNFKEPLRGIMHAFIFYGFVTYLLHTTSQMIAGMFGYGMEDPYKFSLIGFLFG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHC
ESTGHLYESVVQVVSILVLIGLGFFAWRRWIQKAKGLDVHSPASAIVIGMISLLMISTLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
GEGAKAVGAVYDSPTENASLIAAGIGAIWKSIGVEYSTADVVVQIMWWVHILSVFSFMLY
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIE
CCCCCCCEEEEECHHHHHCCCCCCHHHHCCCCCCCCEEEECHHHCCCCCCCHHCCHHHHH
CGRCQVQCPANRTGKVLNPKAIIADLKHALLDKMPEVAKIRAEETDATIAAEKIAALDTG
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHC
VINNYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMRRHLVLAESKFPVELQNAFVN
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCEEEHHHEEE
MENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDILYWVGCAGAFDDRNKSIAKSFVKIL
CCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
QKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTI
HHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHH
KNEYPQFGGNFEVVHHSEFINDLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENP
HHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCH
RDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNNDRVNIKRTKQLLDTGATTIAT
HHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHH
ACPFCVTMITDGVKHEGKVEEVKVKDIAELVADNI
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AISQIAFHLIFTVLFVIANVVFIRAILYRLRLIFNARKAAGTENFLENPNWIFRINSFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEHHHHH
QNVILQKKNFKEPLRGIMHAFIFYGFVTYLLHTTSQMIAGMFGYGMEDPYKFSLIGFLFG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHC
ESTGHLYESVVQVVSILVLIGLGFFAWRRWIQKAKGLDVHSPASAIVIGMISLLMISTLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
GEGAKAVGAVYDSPTENASLIAAGIGAIWKSIGVEYSTADVVVQIMWWVHILSVFSFMLY
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIE
CCCCCCCEEEEECHHHHHCCCCCCHHHHCCCCCCCCEEEECHHHCCCCCCCHHCCHHHHH
CGRCQVQCPANRTGKVLNPKAIIADLKHALLDKMPEVAKIRAEETDATIAAEKIAALDTG
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHC
VINNYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMRRHLVLAESKFPVELQNAFVN
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCEEEHHHEEE
MENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDILYWVGCAGAFDDRNKSIAKSFVKIL
CCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
QKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTI
HHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHH
KNEYPQFGGNFEVVHHSEFINDLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENP
HHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCH
RDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNNDRVNIKRTKQLLDTGATTIAT
HHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHH
ACPFCVTMITDGVKHEGKVEEVKVKDIAELVADNI
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]