| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327719
Identifier: 116327719
GI number: 116327719
Start: 1131184
End: 1132281
Strand: Reverse
Name: 116327719
Synonym: LBL_0972
Alternate gene names: NA
Gene position: 1132281-1131184 (Counterclockwise)
Preceding gene: 116327720
Following gene: 116327717
Centisome position: 31.33
GC content: 42.81
Gene sequence:
>1098_bases ATGAAACAAATTTTTTCAATGTGCCTGGCAGCTTTTCTGTTATTTGCGGGATGTGCGGGAGCAAACGATGGAAACGAAAA TTCTTCGCTCCTTCTTTTGGGAATCTCCGACAAATCGTTGTTAGATATTGCGGCAAATCCTCAGAGATCCTTAGTAAATT CAGTACCCACACCCAACGTTCATTACGTGGATGCTCTTTCTGGAAATAATTCCAACCCTGGAACGTCACTCGCTCCTTAC AAAACCATTACGTATGCAGTTTCGCAACCCGGAAATACGATCTATGTAGCGCCCGGAACCTACAACGAAACGCTGGGAGA AACGTTTCCCATAAAGATACCTGCAGGTATAAATTTAATCGGAAATGAATCCGGAAAAGGCATAGAAAGTAAAGTAAAAG GAGGAAATTCCGGTTATACCGGCACTGGGATCATTCGTAATGAAGGGCCTACTTTGATTTTGGGAATGGGAGTGGTTTCC ACTGGATTTGAGTACGCTACTTTGATTTTAGAAAACGACAGCACAGTTGCCGGATTTACGATTACCAATCCTAAACCTTA CTCTGGAGCGGGACCGGACACTTCGGCTGTTCAAGTTCCTGGATCAATTTCCGGCATTATTTCCGGAATCACAATTCGAA ACAACACATTGACCGAAAGTATCGGAGGTGCGGGGGTTTTTATCCGAATTTCCAATCAGGGCGAAACTGGAAATATCATT TCCGGTAATACTATCGTTTCAAATTATTTCGGGATCTATAATTCTTTCTCAAACGCAGCGATCAAAGTAGAAAATAATTT GATTTCTCGGAACAAGTCGGGAATTCTTCTCGTGACTAATACCGACTTCGGTATCAACGTGGATTTGGGAGGAGGAAGCA CTGGAAGTGTGGGAAACAATACCATTTCCTGCAATACGTTTAATGATCTAATTACACCATTTTCGAATACGGTCACTTTG TATGCTAAGAACAATCATTGGGATCACATTCCGCCTACTGTAGTGACGACAGGCGGAAATGCGGATATATCGAATTCCTC CAATTCTTCCATTTTAACTTCTGGTATGAGTCTCGCGGCTGCGCCTTGTAACCCGTAA
Upstream 100 bases:
>100_bases TTATAAATTTTATTTTCCGTTCAAAATGAAAACATCCGCCTGTTGCATTGAGGACAAAGATTCATATTTTATAAAGAATA GGAATCTTAAGGAAAATAAA
Downstream 100 bases:
>100_bases AATTCATTCCCACCGCTTTCGAATGCAAGAAAGCGGTGGGTCTTTTATAAAGTCTTAAACATATAAAATCGATCCGAGAA ATTTCAGTAAGAATATTTGG
Product: lipoprotein
Products: NA
Alternate protein names: S-Layer Domain Protein; Conserved Domain Protein
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKQIFSMCLAAFLLFAGCAGANDGNENSSLLLLGISDKSLLDIAANPQRSLVNSVPTPNVHYVDALSGNNSNPGTSLAPY KTITYAVSQPGNTIYVAPGTYNETLGETFPIKIPAGINLIGNESGKGIESKVKGGNSGYTGTGIIRNEGPTLILGMGVVS TGFEYATLILENDSTVAGFTITNPKPYSGAGPDTSAVQVPGSISGIISGITIRNNTLTESIGGAGVFIRISNQGETGNII SGNTIVSNYFGIYNSFSNAAIKVENNLISRNKSGILLVTNTDFGINVDLGGGSTGSVGNNTISCNTFNDLITPFSNTVTL YAKNNHWDHIPPTVVTTGGNADISNSSNSSILTSGMSLAAAPCNP
Sequences:
>Translated_365_residues MKQIFSMCLAAFLLFAGCAGANDGNENSSLLLLGISDKSLLDIAANPQRSLVNSVPTPNVHYVDALSGNNSNPGTSLAPY KTITYAVSQPGNTIYVAPGTYNETLGETFPIKIPAGINLIGNESGKGIESKVKGGNSGYTGTGIIRNEGPTLILGMGVVS TGFEYATLILENDSTVAGFTITNPKPYSGAGPDTSAVQVPGSISGIISGITIRNNTLTESIGGAGVFIRISNQGETGNII SGNTIVSNYFGIYNSFSNAAIKVENNLISRNKSGILLVTNTDFGINVDLGGGSTGSVGNNTISCNTFNDLITPFSNTVTL YAKNNHWDHIPPTVVTTGGNADISNSSNSSILTSGMSLAAAPCNP >Mature_365_residues MKQIFSMCLAAFLLFAGCAGANDGNENSSLLLLGISDKSLLDIAANPQRSLVNSVPTPNVHYVDALSGNNSNPGTSLAPY KTITYAVSQPGNTIYVAPGTYNETLGETFPIKIPAGINLIGNESGKGIESKVKGGNSGYTGTGIIRNEGPTLILGMGVVS TGFEYATLILENDSTVAGFTITNPKPYSGAGPDTSAVQVPGSISGIISGITIRNNTLTESIGGAGVFIRISNQGETGNII SGNTIVSNYFGIYNSFSNAAIKVENNLISRNKSGILLVTNTDFGINVDLGGGSTGSVGNNTISCNTFNDLITPFSNTVTL YAKNNHWDHIPPTVVTTGGNADISNSSNSSILTSGMSLAAAPCNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37560; Mature: 37560
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIFSMCLAAFLLFAGCAGANDGNENSSLLLLGISDKSLLDIAANPQRSLVNSVPTPNV CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCCCE HYVDALSGNNSNPGTSLAPYKTITYAVSQPGNTIYVAPGTYNETLGETFPIKIPAGINLI EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHCCCEEEEEECCCCEEE GNESGKGIESKVKGGNSGYTGTGIIRNEGPTLILGMGVVSTGFEYATLILENDSTVAGFT ECCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCHHHCCCEEEEEEEECCCEEEEEE ITNPKPYSGAGPDTSAVQVPGSISGIISGITIRNNTLTESIGGAGVFIRISNQGETGNII ECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCHHHCCCCCEEEEEECCCCCCCCEE SGNTIVSNYFGIYNSFSNAAIKVENNLISRNKSGILLVTNTDFGINVDLGGGSTGSVGNN ECCEEEEHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC TISCNTFNDLITPFSNTVTLYAKNNHWDHIPPTVVTTGGNADISNSSNSSILTSGMSLAA EEEECCHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEEEE APCNP CCCCC >Mature Secondary Structure MKQIFSMCLAAFLLFAGCAGANDGNENSSLLLLGISDKSLLDIAANPQRSLVNSVPTPNV CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCCCE HYVDALSGNNSNPGTSLAPYKTITYAVSQPGNTIYVAPGTYNETLGETFPIKIPAGINLI EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHCCCEEEEEECCCCEEE GNESGKGIESKVKGGNSGYTGTGIIRNEGPTLILGMGVVSTGFEYATLILENDSTVAGFT ECCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCHHHCCCEEEEEEEECCCEEEEEE ITNPKPYSGAGPDTSAVQVPGSISGIISGITIRNNTLTESIGGAGVFIRISNQGETGNII ECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCHHHCCCCCEEEEEECCCCCCCCEE SGNTIVSNYFGIYNSFSNAAIKVENNLISRNKSGILLVTNTDFGINVDLGGGSTGSVGNN ECCEEEEHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC TISCNTFNDLITPFSNTVTLYAKNNHWDHIPPTVVTTGGNADISNSSNSSILTSGMSLAA EEEECCHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEEEE APCNP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA