| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327716
Identifier: 116327716
GI number: 116327716
Start: 1124821
End: 1125945
Strand: Reverse
Name: 116327716
Synonym: LBL_0968
Alternate gene names: NA
Gene position: 1125945-1124821 (Counterclockwise)
Preceding gene: 116327717
Following gene: 116327715
Centisome position: 31.15
GC content: 44.09
Gene sequence:
>1125_bases ATGATCAAAAATCGAATCTTGTTTTTCATTCTCACAGCCATTCTTTTACAAGTAGGCTGTAGCACCGTCATCATCCGTCC TTGGACACCTCCCTATAAAAGCCGGCCGGTTCACGAAATTAGAGTACTTCTTGGAAAAGCCGAAGGCGATCTTCAAATTC GAGGAGAAGGGATCATTTCCGTCTATGACGCAAACGATCTTCTGATTAAAAAAGGAATCGACATCATTTCTTTGGACGCT TCCCGTTTAAAAGCTCCGATTCGTTTTGTAAGTCAAAACAAGAACCTTGAATATAAATCTCTCAAAGTGCGAGGGACAAT TCATCTAATCCCCCAAAACCAAGGTTCTGCTCTCGTGGTTAACGTACTTCCTTTGGAAGAGTATCTCTTGGCGGTTGTTC CCTCCGAAGTTCCTTATAGCTGGCCGATGGAAGCGTTAAAGGCCCAGGCAATCTGTGCAAGAACTTATGCCGTTCGTGAA ATATTAAATAAAAAGAATGCTTTTTACGACGTGGAAGCCACGACAAATTCCCAAGTATACGGAGGCCTTGAAAAGGAACA TCCATTGACTACAAAAGCGGTTCAAGATACAACCGGCGTAATGGCCGTCTTTGAAGAGAACCCGATCCAAGCCTTCTTTC ATTCGAATAGCGGCGGAAAAACGGAAACCCCCGAAAACATTTGGGGAGGTAAAAAAGTCCCCTACCTTTCCATTGTGGCT TCCGAGTTCGACAGCGCCGGAGACAATTTTTATTGGAAAGAAACGATCTCTCAAGAACTCATCAATTCCAAATTCTCGAA CTTAAAACTGGGCGAAATTCAATCGATCCAAGTTTTATCCAGAACGGCATCCGGAAGAGTCGATCTTATAGAGATCAGCG GAACGGACGGTTCTTCCAGAATCAGGGGCAAAGATTTTAGGCAAACTCTCGGCACACCCGTTCGCTCTTTGCGTTTCGGA ATTCAAAAAGAAGGGAACGGTTTCCTTATCAAAGGGATGGGATCCGGTCATGGTGTAGGTTTAAGTCAATGGGGAAGTTT CGGGATGGCGAAAGAAAATTACAACTATGTCGAAATTTTAAGACACTACTATCCCGGAACCGATCTCGCAAGAATTACGC GTTAG
Upstream 100 bases:
>100_bases TTTTACAAAGTCAAAAGCCTTTTTCCACTTCCCGTAAAGCTCAAAAATTCCTATAGAGATTCCGGTTTTTCATCGATATT CAAGAAGAGAGATACTTTTT
Downstream 100 bases:
>100_bases TTAACTTGAATTTCGATATAAGGAAGTTTGGGCGGATCACTCGCAAATTTTATAGTAAAAACGGGTCGCAGCATAATAAT CGCATTTGTTATGCAGAACT
Product: lipoprotein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIKNRILFFILTAILLQVGCSTVIIRPWTPPYKSRPVHEIRVLLGKAEGDLQIRGEGIISVYDANDLLIKKGIDIISLDA SRLKAPIRFVSQNKNLEYKSLKVRGTIHLIPQNQGSALVVNVLPLEEYLLAVVPSEVPYSWPMEALKAQAICARTYAVRE ILNKKNAFYDVEATTNSQVYGGLEKEHPLTTKAVQDTTGVMAVFEENPIQAFFHSNSGGKTETPENIWGGKKVPYLSIVA SEFDSAGDNFYWKETISQELINSKFSNLKLGEIQSIQVLSRTASGRVDLIEISGTDGSSRIRGKDFRQTLGTPVRSLRFG IQKEGNGFLIKGMGSGHGVGLSQWGSFGMAKENYNYVEILRHYYPGTDLARITR
Sequences:
>Translated_374_residues MIKNRILFFILTAILLQVGCSTVIIRPWTPPYKSRPVHEIRVLLGKAEGDLQIRGEGIISVYDANDLLIKKGIDIISLDA SRLKAPIRFVSQNKNLEYKSLKVRGTIHLIPQNQGSALVVNVLPLEEYLLAVVPSEVPYSWPMEALKAQAICARTYAVRE ILNKKNAFYDVEATTNSQVYGGLEKEHPLTTKAVQDTTGVMAVFEENPIQAFFHSNSGGKTETPENIWGGKKVPYLSIVA SEFDSAGDNFYWKETISQELINSKFSNLKLGEIQSIQVLSRTASGRVDLIEISGTDGSSRIRGKDFRQTLGTPVRSLRFG IQKEGNGFLIKGMGSGHGVGLSQWGSFGMAKENYNYVEILRHYYPGTDLARITR >Mature_374_residues MIKNRILFFILTAILLQVGCSTVIIRPWTPPYKSRPVHEIRVLLGKAEGDLQIRGEGIISVYDANDLLIKKGIDIISLDA SRLKAPIRFVSQNKNLEYKSLKVRGTIHLIPQNQGSALVVNVLPLEEYLLAVVPSEVPYSWPMEALKAQAICARTYAVRE ILNKKNAFYDVEATTNSQVYGGLEKEHPLTTKAVQDTTGVMAVFEENPIQAFFHSNSGGKTETPENIWGGKKVPYLSIVA SEFDSAGDNFYWKETISQELINSKFSNLKLGEIQSIQVLSRTASGRVDLIEISGTDGSSRIRGKDFRQTLGTPVRSLRFG IQKEGNGFLIKGMGSGHGVGLSQWGSFGMAKENYNYVEILRHYYPGTDLARITR
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 41570; Mature: 41570
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNRILFFILTAILLQVGCSTVIIRPWTPPYKSRPVHEIRVLLGKAEGDLQIRGEGIIS CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHEEEECCCCCEEEECCCEEE VYDANDLLIKKGIDIISLDASRLKAPIRFVSQNKNLEYKSLKVRGTIHLIPQNQGSALVV EECCCCEEEECCCCEEEECHHHHHHHHHEECCCCCCEEEEEEEEEEEEEEECCCCCEEEE NVLPLEEYLLAVVPSEVPYSWPMEALKAQAICARTYAVREILNKKNAFYDVEATTNSQVY EECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE GGLEKEHPLTTKAVQDTTGVMAVFEENPIQAFFHSNSGGKTETPENIWGGKKVPYLSIVA CCCCCCCCCCHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCEEEEEE SEFDSAGDNFYWKETISQELINSKFSNLKLGEIQSIQVLSRTASGRVDLIEISGTDGSSR HHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCC IRGKDFRQTLGTPVRSLRFGIQKEGNGFLIKGMGSGHGVGLSQWGSFGMAKENYNYVEIL CCCHHHHHHHCCCHHHHHHCCEECCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHH RHYYPGTDLARITR HHHCCCCCHHHHCC >Mature Secondary Structure MIKNRILFFILTAILLQVGCSTVIIRPWTPPYKSRPVHEIRVLLGKAEGDLQIRGEGIIS CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHEEEECCCCCEEEECCCEEE VYDANDLLIKKGIDIISLDASRLKAPIRFVSQNKNLEYKSLKVRGTIHLIPQNQGSALVV EECCCCEEEECCCCEEEECHHHHHHHHHEECCCCCCEEEEEEEEEEEEEEECCCCCEEEE NVLPLEEYLLAVVPSEVPYSWPMEALKAQAICARTYAVREILNKKNAFYDVEATTNSQVY EECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE GGLEKEHPLTTKAVQDTTGVMAVFEENPIQAFFHSNSGGKTETPENIWGGKKVPYLSIVA CCCCCCCCCCHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCEEEEEE SEFDSAGDNFYWKETISQELINSKFSNLKLGEIQSIQVLSRTASGRVDLIEISGTDGSSR HHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCC IRGKDFRQTLGTPVRSLRFGIQKEGNGFLIKGMGSGHGVGLSQWGSFGMAKENYNYVEIL CCCHHHHHHHCCCHHHHHHCCEECCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHH RHYYPGTDLARITR HHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA