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The map label for this gene is rcp1 [H]

Identifier: 116327622

GI number: 116327622

Start: 993107

End: 993559

Strand: Reverse

Name: rcp1 [H]

Synonym: LBL_0855

Alternate gene names: 116327622

Gene position: 993559-993107 (Counterclockwise)

Preceding gene: 116327623

Following gene: 116327619

Centisome position: 27.49

GC content: 41.72

Gene sequence:

>453_bases
ATGTATGATCTTCAGGACCAATCAATCTCGATCTTATACGCGGAAGACAATCCGCAAGACTCGGAACTTACTCTCAGAAG
CTTAAAAAGACACAATCTCACGAATCAAGTGAAACTCGTCAGAGACGGCGAAGAAGCCTTGGAATATTTATATGCGACCG
GACGTTACGAGAATCGGGATAAAGCACAATTACCTTCTCTCATCCTTTTAGATTTGAAGATGCCCAAAGTAGACGGAATC
GAAGTGCTTCGCAAAGTAAGAAGCGAGGAATTTACGAAAATGCTTCCCGTGGTTATCCTCACCTCTTCCGCCGAAGAAAA
GGACATCGTGGAAAGTTATAGACTCGGAGTAAACAGTTACGTAGTAAAACCTCTCGATTTCGACAAGTTTAGCGAAGTAG
CCAGTGAAATAGGATTCTATTGGATTTTAGTGAATCAAGGTATAGGTAAATGA

Upstream 100 bases:

>100_bases
GTAAAAAGGGTGATCGAAAGACACAACGGCAAGGTTTGGGGAAATAGCAAATTGAACGAAGGCGCTTGTTTTTATTTTAC
CCTAGGAGTTGGCGACAATC

Downstream 100 bases:

>100_bases
CGTTTTAGTCGGATTGTTCACCGTAAAACGGTTAAAAATAAAAACCGATCCGTAAACAATCGTATGAAATGCCAGACAAG
ATAGTAACCATCTACGTTCT

Product: response regulator of a two component regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MYDLQDQSISILYAEDNPQDSELTLRSLKRHNLTNQVKLVRDGEEALEYLYATGRYENRDKAQLPSLILLDLKMPKVDGI
EVLRKVRSEEFTKMLPVVILTSSAEEKDIVESYRLGVNSYVVKPLDFDKFSEVASEIGFYWILVNQGIGK

Sequences:

>Translated_150_residues
MYDLQDQSISILYAEDNPQDSELTLRSLKRHNLTNQVKLVRDGEEALEYLYATGRYENRDKAQLPSLILLDLKMPKVDGI
EVLRKVRSEEFTKMLPVVILTSSAEEKDIVESYRLGVNSYVVKPLDFDKFSEVASEIGFYWILVNQGIGK
>Mature_150_residues
MYDLQDQSISILYAEDNPQDSELTLRSLKRHNLTNQVKLVRDGEEALEYLYATGRYENRDKAQLPSLILLDLKMPKVDGI
EVLRKVRSEEFTKMLPVVILTSSAEEKDIVESYRLGVNSYVVKPLDFDKFSEVASEIGFYWILVNQGIGK

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=67, Percent_Identity=40.2985074626866, Blast_Score=62, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322044, Length=136, Percent_Identity=30.1470588235294, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.-

Molecular weight: Translated: 17248; Mature: 17248

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLQDQSISILYAEDNPQDSELTLRSLKRHNLTNQVKLVRDGEEALEYLYATGRYENRD
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCC
KAQLPSLILLDLKMPKVDGIEVLRKVRSEEFTKMLPVVILTSSAEEKDIVESYRLGVNSY
CHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCE
VVKPLDFDKFSEVASEIGFYWILVNQGIGK
EECCCCHHHHHHHHHHHCEEEEEECCCCCC
>Mature Secondary Structure
MYDLQDQSISILYAEDNPQDSELTLRSLKRHNLTNQVKLVRDGEEALEYLYATGRYENRD
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCC
KAQLPSLILLDLKMPKVDGIEVLRKVRSEEFTKMLPVVILTSSAEEKDIVESYRLGVNSY
CHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCE
VVKPLDFDKFSEVASEIGFYWILVNQGIGK
EECCCCHHHHHHHHHHHCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]