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The map label for this gene is 116327604

Identifier: 116327604

GI number: 116327604

Start: 969224

End: 969871

Strand: Direct

Name: 116327604

Synonym: LBL_0836

Alternate gene names: NA

Gene position: 969224-969871 (Clockwise)

Preceding gene: 116327603

Following gene: 116327605

Centisome position: 26.82

GC content: 36.42

Gene sequence:

>648_bases
ATGAATTTTCCGTTATTAAAGGAATTTCTTGTGATTGGCTTCGTTTGTTTTACTGCGAGTTTCAATTGTAAAAAGAATGC
GGAAGAGATTTTGGGAGAGGCAAAGGCAAAACCGGAATTGGTTCAAACTTTGGATTTTGGAATGCAGAAGTTGTCCACGG
TTCCGGAAGGAGTTTGCGGTTTTCCGAATTTAACCAAGTTGGATCTTCGTTTAAACAGTTTGACTTTTCTTCCGGAATTT
ATCGGAGAATGTAAACGCCTTGAACAACTTAATCTTTTCGGGAACGACCTTACGACATTTCCGTCTACGTTTTCTAAATT
AAAAAATCTGAAAGTGTTACTGGCGGGAAATAACGATTTTACGATTCTACCTTCCGAACTTTTGTTTCTTCCATTGATCA
AAATTTTATACGTAGATCGGAATAAATTAATTCTAACGGAAACGGATGTGGAAATTCTCGCTTCTCTTTCCTCCTTGGAG
GAATTGGATCTGAGTCTGAATTCGGGGATTAAGGCGCTTCCTTTTAATTACGAAAAACTTGTGAATCTCATTAATTTAAA
AAGATTGAATATTAAAAAAACATCATTAAAGGGAGAGGATGCAGATAAATTGCAGGCGATTCTTCCAAATACCAAAATCG
ACTACTGA

Upstream 100 bases:

>100_bases
TGAAGGATATCGGAGTGGAAGTTTCTTTTTCGGAATTGAACGGGCCCTATGAGAAAGGTTTGGAGGTCGTATTCGCTTTA
TGAGAGAGGGAGCAAAACGA

Downstream 100 bases:

>100_bases
AACGACTATGAGCGAAACCCAAAAAGAAAACCCGTATTCCTCCACAGTTCTCCTTCCTAAGACCGACTTTCCCATGAAGG
CGGATCTTGCCAAACGGGAA

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNFPLLKEFLVIGFVCFTASFNCKKNAEEILGEAKAKPELVQTLDFGMQKLSTVPEGVCGFPNLTKLDLRLNSLTFLPEF
IGECKRLEQLNLFGNDLTTFPSTFSKLKNLKVLLAGNNDFTILPSELLFLPLIKILYVDRNKLILTETDVEILASLSSLE
ELDLSLNSGIKALPFNYEKLVNLINLKRLNIKKTSLKGEDADKLQAILPNTKIDY

Sequences:

>Translated_215_residues
MNFPLLKEFLVIGFVCFTASFNCKKNAEEILGEAKAKPELVQTLDFGMQKLSTVPEGVCGFPNLTKLDLRLNSLTFLPEF
IGECKRLEQLNLFGNDLTTFPSTFSKLKNLKVLLAGNNDFTILPSELLFLPLIKILYVDRNKLILTETDVEILASLSSLE
ELDLSLNSGIKALPFNYEKLVNLINLKRLNIKKTSLKGEDADKLQAILPNTKIDY
>Mature_215_residues
MNFPLLKEFLVIGFVCFTASFNCKKNAEEILGEAKAKPELVQTLDFGMQKLSTVPEGVCGFPNLTKLDLRLNSLTFLPEF
IGECKRLEQLNLFGNDLTTFPSTFSKLKNLKVLLAGNNDFTILPSELLFLPLIKILYVDRNKLILTETDVEILASLSSLE
ELDLSLNSGIKALPFNYEKLVNLINLKRLNIKKTSLKGEDADKLQAILPNTKIDY

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI55770895, Length=175, Percent_Identity=30.2857142857143, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI8923909, Length=175, Percent_Identity=30.2857142857143, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007092, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281362651, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI62472958, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650330, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650334, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650332, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281362657, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281362655, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281362653, Length=146, Percent_Identity=36.3013698630137, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650336, Length=146, Percent_Identity=35.6164383561644, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24146; Mature: 24146

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFPLLKEFLVIGFVCFTASFNCKKNAEEILGEAKAKPELVQTLDFGMQKLSTVPEGVCG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
FPNLTKLDLRLNSLTFLPEFIGECKRLEQLNLFGNDLTTFPSTFSKLKNLKVLLAGNNDF
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCE
TILPSELLFLPLIKILYVDRNKLILTETDVEILASLSSLEELDLSLNSGIKALPFNYEKL
EECHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHH
VNLINLKRLNIKKTSLKGEDADKLQAILPNTKIDY
HHHHHHHHCCEECCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNFPLLKEFLVIGFVCFTASFNCKKNAEEILGEAKAKPELVQTLDFGMQKLSTVPEGVCG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
FPNLTKLDLRLNSLTFLPEFIGECKRLEQLNLFGNDLTTFPSTFSKLKNLKVLLAGNNDF
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCE
TILPSELLFLPLIKILYVDRNKLILTETDVEILASLSSLEELDLSLNSGIKALPFNYEKL
EECHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHH
VNLINLKRLNIKKTSLKGEDADKLQAILPNTKIDY
HHHHHHHHCCEECCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA