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The map label for this gene is 116327525

Identifier: 116327525

GI number: 116327525

Start: 855940

End: 856533

Strand: Reverse

Name: 116327525

Synonym: LBL_0754

Alternate gene names: NA

Gene position: 856533-855940 (Counterclockwise)

Preceding gene: 116327526

Following gene: 116327523

Centisome position: 23.7

GC content: 41.58

Gene sequence:

>594_bases
TTGATCACAATACTGATTTGTCTCGTCACCTTCGGTTTAAGTATTTGGTGTTTTGCCTCCGAGGATAAACTCGGTAAGTT
CGTTCTCACCCCGTATCGATTGAAAAGAAATAAGAACTATTATACTCTTATCACTTCCGGTTTTATACATGAGGACTGGA
TGCATTTGATCTTCAACATGATTTCGTTTTATTCCTTCGGAAAAAATTTAGAAACGACCGTAGGCCCCGTCAAATTTCTT
CTTTTTTATCTCGGGACGATCTTAATTACGAGCGTCATCTCTTGGAGAAAAAATCTGGAAAATCCTCTTTATGCAACGTT
AGGCGCATCTGGCGGTGTTTGCGGCGTTTTATTTGCCACGATTCTTTTTTACCCGAATCTATCCCTTTACATGATGTTCA
TACCGATCCCGATTCCGGGAGCGATTTACGCGGTCTTATATTTAGTTTACGCGTATTTTTCCTCAAAAAGCGGGCACTCG
GACGGAATCAATCACGACGCTCATCTTTGGGGTGCCTTGTGCGGAATTGTATTCGCTCTTTTGCTCGATCCTGAAATCCT
CGGTAGAGTTCTTCGGAATATTTCAGGAAGTTAA

Upstream 100 bases:

>100_bases
AAAGAACTCGACTTTGAAAGAGCCGCCATCCTAAGAGATAAGATGTTATCCATCCAAATAAACGACCCTTCGACTGAAAA
CTAACACAAAGGAATCTATT

Downstream 100 bases:

>100_bases
AAGAATACGATTTTTATTCTAAAAGTTTTGGTTACACGACGACTCTGTATGCCGCAACCAAAGTCGTCGATACAAGAAAA
TCATTACATAAAGATCGCTT

Product: intramembrane protease

Products: NA

Alternate protein names: Peptidase; Rhomboid-Like Protein; Transmembrane Rhomboid Family Protein; Cytoplasmic Membrane Protein; Integral Membrane Protein; S54 Family Peptidase; Intramembrane Protease

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MITILICLVTFGLSIWCFASEDKLGKFVLTPYRLKRNKNYYTLITSGFIHEDWMHLIFNMISFYSFGKNLETTVGPVKFL
LFYLGTILITSVISWRKNLENPLYATLGASGGVCGVLFATILFYPNLSLYMMFIPIPIPGAIYAVLYLVYAYFSSKSGHS
DGINHDAHLWGALCGIVFALLLDPEILGRVLRNISGS

Sequences:

>Translated_197_residues
MITILICLVTFGLSIWCFASEDKLGKFVLTPYRLKRNKNYYTLITSGFIHEDWMHLIFNMISFYSFGKNLETTVGPVKFL
LFYLGTILITSVISWRKNLENPLYATLGASGGVCGVLFATILFYPNLSLYMMFIPIPIPGAIYAVLYLVYAYFSSKSGHS
DGINHDAHLWGALCGIVFALLLDPEILGRVLRNISGS
>Mature_197_residues
MITILICLVTFGLSIWCFASEDKLGKFVLTPYRLKRNKNYYTLITSGFIHEDWMHLIFNMISFYSFGKNLETTVGPVKFL
LFYLGTILITSVISWRKNLENPLYATLGASGGVCGVLFATILFYPNLSLYMMFIPIPIPGAIYAVLYLVYAYFSSKSGHS
DGINHDAHLWGALCGIVFALLLDPEILGRVLRNISGS

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22101; Mature: 22101

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITILICLVTFGLSIWCFASEDKLGKFVLTPYRLKRNKNYYTLITSGFIHEDWMHLIFNM
CHHHHHHHHHHHHHEEEEECCCCCCCEEECHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
ISFYSFGKNLETTVGPVKFLLFYLGTILITSVISWRKNLENPLYATLGASGGVCGVLFAT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
ILFYPNLSLYMMFIPIPIPGAIYAVLYLVYAYFSSKSGHSDGINHDAHLWGALCGIVFAL
HHHCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LLDPEILGRVLRNISGS
HHCHHHHHHHHHHCCCC
>Mature Secondary Structure
MITILICLVTFGLSIWCFASEDKLGKFVLTPYRLKRNKNYYTLITSGFIHEDWMHLIFNM
CHHHHHHHHHHHHHEEEEECCCCCCCEEECHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
ISFYSFGKNLETTVGPVKFLLFYLGTILITSVISWRKNLENPLYATLGASGGVCGVLFAT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
ILFYPNLSLYMMFIPIPIPGAIYAVLYLVYAYFSSKSGHSDGINHDAHLWGALCGIVFAL
HHHCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LLDPEILGRVLRNISGS
HHCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA